Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:138918182-140076909

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D6Mit59 6 138976326 to 138976494 168 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 59
Gm44267 6 139137127 to 139137511 384 + unclassified gene predicted gene, 44267
Gm44268 6 139140770 to 139140933 163 + unclassified gene predicted gene, 44268
Gm25434 6 139196065 to 139196231 166 - snoRNA gene predicted gene, 25434
4922502N22Rik 6 139315597 to 139322576 6979 - lincRNA gene RIKEN cDNA 4922502N22 gene
Tssr2048 6 139321956 to 139321959 3 + TSS region transcription start site region 2048
Rergl 6 139493182 to 139501909 8727 - protein coding gene RERG/RAS-like
Tssr63913 6 139501883 to 139501902 19 - TSS region transcription start site region 63913
Tssr63914 6 139501907 to 139501918 11 - TSS region transcription start site region 63914
Tssr63915 6 139501921 to 139501933 12 - TSS region transcription start site region 63915
4930404I20Rik 6 139555559 to 139557611 2052 - lincRNA gene RIKEN cDNA 4930404I20 gene
4930443G03Rik 6 139575924 to 139577205 1281 - unclassified gene RIKEN cDNA 4930443G03 gene
Tssr59403 6 139587198 to 139587230 32 + TSS region transcription start site region 59403
Tssr59404 6 139599477 to 139599501 24 + TSS region transcription start site region 59404
Pik3c2g 6 139614072 to 139969284 355212 + protein coding gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
Tssr59405 6 139662684 to 139662696 12 + TSS region transcription start site region 59405
Gm37269 6 139776430 to 139778320 1890 + unclassified gene predicted gene, 37269
Gm43940 6 139830387 to 139830551 164 + unclassified gene predicted gene, 43940
Tssr59406 6 139841652 to 139841658 6 + TSS region transcription start site region 59406
Tssr59407 6 139896711 to 139896714 3 + TSS region transcription start site region 59407
Gm29930 6 139965545 to 139971786 6241 - lncRNA gene predicted gene, 29930
Plcz1 6 139989673 to 140041457 51784 - protein coding gene phospholipase C, zeta 1
Gm44112 6 140033161 to 140033532 371 - pseudogene predicted gene, 44112
Tssr63916 6 140041409 to 140041466 57 - TSS region transcription start site region 63916
Tssr63917 6 140041473 to 140041476 3 - TSS region transcription start site region 63917
Tssr59408 6 140041519 to 140041530 11 + TSS region transcription start site region 59408
Capza3 6 140041525 to 140042789 1264 + protein coding gene capping protein (actin filament) muscle Z-line, alpha 3
Tssr59409 6 140041534 to 140041537 3 + TSS region transcription start site region 59409
Tssr59410 6 140041549 to 140041562 13 + TSS region transcription start site region 59410
Gm45959 6 140046012 to 140069807 23795 - lncRNA gene predicted gene, 45959
D6Dcr26 6 140054282 to 140054379 97 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 26
Gm44156 6 140056401 to 140057589 1188 - pseudogene predicted gene, 44156
Gm44155 6 140057583 to 140057994 411 + pseudogene predicted gene, 44155
Gm44158 6 140069994 to 140070498 504 - pseudogene predicted gene, 44158