Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:138416252-139216391

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmo3 6 138362918 to 138581968 219050 - protein coding gene LIM domain only 3
Tssr63902 6 138421379 to 138421405 26 - TSS region transcription start site region 63902
Cpgi18121 6 138422093 to 138422498 405 CpG island CpG island 18121
Tssr59401 6 138422235 to 138422246 11 + TSS region transcription start site region 59401
Tssr63903 6 138422513 to 138422522 9 - TSS region transcription start site region 63903
Tssr63904 6 138422530 to 138422543 13 - TSS region transcription start site region 63904
Tssr63905 6 138422864 to 138422894 30 - TSS region transcription start site region 63905
Tssr63906 6 138422898 to 138422915 17 - TSS region transcription start site region 63906
Tssr63907 6 138423094 to 138423144 50 - TSS region transcription start site region 63907
A830011K09Rik 6 138423105 to 138429592 6487 + antisense lncRNA gene RIKEN cDNA A830011K09 gene
Tssr63908 6 138424593 to 138424611 18 - TSS region transcription start site region 63908
Tssr63909 6 138426692 to 138426701 9 - TSS region transcription start site region 63909
Tssr63910 6 138426735 to 138426747 12 - TSS region transcription start site region 63910
Tssr63911 6 138427076 to 138427100 24 - TSS region transcription start site region 63911
Gm30332 6 138443973 to 138461615 17642 + antisense lncRNA gene predicted gene, 30332
Tssr2047 6 138563002 to 138563007 5 + TSS region transcription start site region 2047
B230110G15Rik 6 138580624 to 138599314 18690 + antisense lncRNA gene RIKEN cDNA B230110G15 gene
Gm44266 6 138600842 to 138601341 499 + unclassified gene predicted gene, 44266
Igbp1b 6 138657089 to 138658444 1355 - protein coding gene immunoglobulin (CD79A) binding protein 1b
Cpgi18122 6 138657631 to 138658403 772 CpG island CpG island 18122
Tssr63912 6 138658449 to 138658456 7 - TSS region transcription start site region 63912
Tssr59402 6 138727884 to 138727887 3 + TSS region transcription start site region 59402
D6Mit199 6 138816252 to 138816391 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 199
D6Mit199.1 6 138816441 to 138816601 160 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 199.1
Gm9038 6 138859521 to 138860124 603 - pseudogene predicted gene 9038
Gm30583 6 138873581 to 138892752 19171 + lncRNA gene predicted gene, 30583
D6Mit59 6 138976326 to 138976494 168 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 59
Gm44267 6 139137127 to 139137511 384 + unclassified gene predicted gene, 44267
Gm44268 6 139140770 to 139140933 163 + unclassified gene predicted gene, 44268
Gm25434 6 139196065 to 139196231 166 - snoRNA gene predicted gene, 25434