Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:137420298-138860320

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93 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmv3 6 128834894 to 137439929 8605035 QTL cytomegalovirus resistance 3
Ptpro 6 137252319 to 137463233 210914 + protein coding gene protein tyrosine phosphatase, receptor type, O
Tssr59375 6 137425321 to 137425337 16 + TSS region transcription start site region 59375
Tssr59376 6 137425357 to 137425370 13 + TSS region transcription start site region 59376
Gm44258 6 137431305 to 137431605 300 + sense intronic lncRNA gene predicted gene, 44258
Bulb2 6 137439808 to 137439929 121 QTL bulb size 2
D6Mit291 6 137439808 to 137439929 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 291
Tssr59377 6 137459291 to 137459315 24 + TSS region transcription start site region 59377
Tssr59378 6 137464452 to 137464453 1 + TSS region transcription start site region 59378
Eps8 6 137477245 to 137649397 172152 - protein coding gene epidermal growth factor receptor pathway substrate 8
Tssr63884 6 137487217 to 137487221 4 - TSS region transcription start site region 63884
Tssr63885 6 137505427 to 137505440 13 - TSS region transcription start site region 63885
Tssr63886 6 137516995 to 137517019 24 - TSS region transcription start site region 63886
Tssr63887 6 137519741 to 137519742 1 - TSS region transcription start site region 63887
Tssr63888 6 137519871 to 137519876 5 - TSS region transcription start site region 63888
Tssr63889 6 137519880 to 137519900 20 - TSS region transcription start site region 63889
Tssr63890 6 137537659 to 137537678 19 - TSS region transcription start site region 63890
Tssr63891 6 137537763 to 137537776 13 - TSS region transcription start site region 63891
Tssr63892 6 137537782 to 137537795 13 - TSS region transcription start site region 63892
Tssr59379 6 137537928 to 137537934 6 + TSS region transcription start site region 59379
Tssr2045 6 137545234 to 137545235 1 + TSS region transcription start site region 2045
Tssr63893 6 137563572 to 137563577 5 - TSS region transcription start site region 63893
Tssr63894 6 137570746 to 137570760 14 - TSS region transcription start site region 63894
Tssr63895 6 137570785 to 137570808 23 - TSS region transcription start site region 63895
Tssr63896 6 137570812 to 137570831 19 - TSS region transcription start site region 63896
Tssr63897 6 137571007 to 137571032 25 - TSS region transcription start site region 63897
Tssr63898 6 137571038 to 137571054 16 - TSS region transcription start site region 63898
Gm44106 6 137591977 to 137593575 1598 - unclassified gene predicted gene, 44106
Tssr63899 6 137630281 to 137630282 1 - TSS region transcription start site region 63899
Cpgi18116 6 137648318 to 137649798 1480 CpG island CpG island 18116
Tssr63900 6 137649178 to 137649192 14 - TSS region transcription start site region 63900
Tssr63901 6 137649211 to 137649294 83 - TSS region transcription start site region 63901
Gm38915 6 137703145 to 137717430 14285 + lncRNA gene predicted gene, 38915
Cpgi18117 6 137734724 to 137735977 1253 CpG island CpG island 18117
Strap 6 137735082 to 137751930 16848 + protein coding gene serine/threonine kinase receptor associated protein
Tssr59380 6 137735102 to 137735151 49 + TSS region transcription start site region 59380
Tssr2046 6 137735162 to 137735167 5 + TSS region transcription start site region 2046
Tssr59381 6 137735182 to 137735189 7 + TSS region transcription start site region 59381
Tssr59382 6 137745569 to 137745581 12 + TSS region transcription start site region 59382
Cpgi18118 6 137754431 to 137754942 511 CpG island CpG island 18118
Tssr59383 6 137754529 to 137754599 70 + TSS region transcription start site region 59383
Dera 6 137754577 to 137837872 83295 + protein coding gene deoxyribose-phosphate aldolase (putative)
Tssr59384 6 137754602 to 137754608 6 + TSS region transcription start site region 59384
Tssr59385 6 137772005 to 137772009 4 + TSS region transcription start site region 59385
Tssr59386 6 137782915 to 137782934 19 + TSS region transcription start site region 59386
Cpgi18119 6 137846223 to 137846479 256 CpG island CpG island 18119
Gm38552 6 137856678 to 137868642 11964 + lncRNA gene predicted gene, 38552
D6Mit302 6 137874356 to 137874468 112 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 302
Gm24308 6 137919858 to 137919971 113 - miRNA gene predicted gene, 24308
Cpgi18120 6 137948227 to 137948530 303 CpG island CpG island 18120
Slc15a5 6 137983586 to 138079916 96330 - protein coding gene solute carrier family 15, member 5
Tssr59387 6 138115097 to 138115101 4 + TSS region transcription start site region 59387
Tssr59388 6 138140298 to 138140320 22 + TSS region transcription start site region 59388
Tssr59389 6 138140344 to 138140360 16 + TSS region transcription start site region 59389
Tssr59390 6 138140521 to 138140581 60 + TSS region transcription start site region 59390
Mgst1 6 138140537 to 138156755 16218 + protein coding gene microsomal glutathione S-transferase 1
Tssr59391 6 138141569 to 138141617 48 + TSS region transcription start site region 59391
Tssr59392 6 138141648 to 138141669 21 + TSS region transcription start site region 59392
Tssr59393 6 138142853 to 138142863 10 + TSS region transcription start site region 59393
Tssr59394 6 138147683 to 138147700 17 + TSS region transcription start site region 59394
Tssr59395 6 138147713 to 138147744 31 + TSS region transcription start site region 59395
Tssr59396 6 138150803 to 138150834 31 + TSS region transcription start site region 59396
Tssr59397 6 138151124 to 138151155 31 + TSS region transcription start site region 59397
Tssr59398 6 138156296 to 138156308 12 + TSS region transcription start site region 59398
Tssr59399 6 138156704 to 138156716 12 + TSS region transcription start site region 59399
Gm30213 6 138166555 to 138177815 11260 + lncRNA gene predicted gene, 30213
D0Nds42 6 138172277 to 138172370 93 DNA segment DNA segment, Nuffield Department of Surgery 42
Tssr59400 6 138325311 to 138325318 7 + TSS region transcription start site region 59400
Lmo3 6 138362918 to 138581968 219050 - protein coding gene LIM domain only 3
Tssr63902 6 138421379 to 138421405 26 - TSS region transcription start site region 63902
Cpgi18121 6 138422093 to 138422498 405 CpG island CpG island 18121
Tssr59401 6 138422235 to 138422246 11 + TSS region transcription start site region 59401
Tssr63903 6 138422513 to 138422522 9 - TSS region transcription start site region 63903
Tssr63904 6 138422530 to 138422543 13 - TSS region transcription start site region 63904
Tssr63905 6 138422864 to 138422894 30 - TSS region transcription start site region 63905
Tssr63906 6 138422898 to 138422915 17 - TSS region transcription start site region 63906
Tssr63907 6 138423094 to 138423144 50 - TSS region transcription start site region 63907
A830011K09Rik 6 138423105 to 138429592 6487 + antisense lncRNA gene RIKEN cDNA A830011K09 gene
Tssr63908 6 138424593 to 138424611 18 - TSS region transcription start site region 63908
Tssr63909 6 138426692 to 138426701 9 - TSS region transcription start site region 63909
Tssr63910 6 138426735 to 138426747 12 - TSS region transcription start site region 63910
Tssr63911 6 138427076 to 138427100 24 - TSS region transcription start site region 63911
Gm30332 6 138443973 to 138461615 17642 + antisense lncRNA gene predicted gene, 30332
Tssr2047 6 138563002 to 138563007 5 + TSS region transcription start site region 2047
B230110G15Rik 6 138580624 to 138599314 18690 + antisense lncRNA gene RIKEN cDNA B230110G15 gene
Gm44266 6 138600842 to 138601341 499 + unclassified gene predicted gene, 44266
Igbp1b 6 138657089 to 138658444 1355 - protein coding gene immunoglobulin (CD79A) binding protein 1b
Cpgi18122 6 138657631 to 138658403 772 CpG island CpG island 18122
Tssr63912 6 138658449 to 138658456 7 - TSS region transcription start site region 63912
Tssr59402 6 138727884 to 138727887 3 + TSS region transcription start site region 59402
D6Mit199 6 138816252 to 138816391 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 199
D6Mit199.1 6 138816441 to 138816601 160 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 199.1
Gm9038 6 138859521 to 138860124 603 - pseudogene predicted gene 9038