Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:137354076-147274096

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866 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clas1 6 112269957 to 147052561 34782604 QTL carcinogen-induced lung adenoma susceptibility 1
Mvwf2 6 114368732 to 145656013 31287281 QTL modifier of von Willebrand factor 2
Radpf3 6 115242853 to 146429238 31186385 QTL radiation pulmonary fibrosis 3
Pas17 6 124357314 to 145656013 21298699 QTL pulmonary adenoma susceptibility 17
Acigg2 6 125048587 to 144315227 19266640 QTL anti COL7 IgG1 antibody 2
Cmv3 6 128834894 to 137439929 8605035 QTL cytomegalovirus resistance 3
Shm5 6 132289569 to 145656013 13366444 QTL sperm head morphology 5
Mop1 6 132601042 to 146429238 13828196 QTL morphine preference 1
Ptpro 6 137252319 to 137463233 210914 + protein coding gene protein tyrosine phosphatase, receptor type, O
Tssr59365 6 137376544 to 137376577 33 + TSS region transcription start site region 59365
Tssr59366 6 137386591 to 137386594 3 + TSS region transcription start site region 59366
Tssr59367 6 137410720 to 137410723 3 + TSS region transcription start site region 59367
Tssr59368 6 137410731 to 137410740 9 + TSS region transcription start site region 59368
Tssr59369 6 137410746 to 137410772 26 + TSS region transcription start site region 59369
Tssr59370 6 137410775 to 137410788 13 + TSS region transcription start site region 59370
Tssr59371 6 137410835 to 137410838 3 + TSS region transcription start site region 59371
Tssr59372 6 137410845 to 137410852 7 + TSS region transcription start site region 59372
Tssr59373 6 137410986 to 137411024 38 + TSS region transcription start site region 59373
Tssr59374 6 137411056 to 137411071 15 + TSS region transcription start site region 59374
Tssr59375 6 137425321 to 137425337 16 + TSS region transcription start site region 59375
Tssr59376 6 137425357 to 137425370 13 + TSS region transcription start site region 59376
Gm44258 6 137431305 to 137431605 300 + sense intronic lncRNA gene predicted gene, 44258
D6Mit291 6 137439808 to 137439929 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 291
Bulb2 6 137439808 to 137439929 121 QTL bulb size 2
Tssr59377 6 137459291 to 137459315 24 + TSS region transcription start site region 59377
Tssr59378 6 137464452 to 137464453 1 + TSS region transcription start site region 59378
Eps8 6 137477245 to 137649397 172152 - protein coding gene epidermal growth factor receptor pathway substrate 8
Tssr63884 6 137487217 to 137487221 4 - TSS region transcription start site region 63884
Tssr63885 6 137505427 to 137505440 13 - TSS region transcription start site region 63885
Tssr63886 6 137516995 to 137517019 24 - TSS region transcription start site region 63886
Tssr63887 6 137519741 to 137519742 1 - TSS region transcription start site region 63887
Tssr63888 6 137519871 to 137519876 5 - TSS region transcription start site region 63888
Tssr63889 6 137519880 to 137519900 20 - TSS region transcription start site region 63889
Tssr63890 6 137537659 to 137537678 19 - TSS region transcription start site region 63890
Tssr63891 6 137537763 to 137537776 13 - TSS region transcription start site region 63891
Tssr63892 6 137537782 to 137537795 13 - TSS region transcription start site region 63892
Tssr59379 6 137537928 to 137537934 6 + TSS region transcription start site region 59379
Tssr2045 6 137545234 to 137545235 1 + TSS region transcription start site region 2045
Tssr63893 6 137563572 to 137563577 5 - TSS region transcription start site region 63893
Tssr63894 6 137570746 to 137570760 14 - TSS region transcription start site region 63894
Tssr63895 6 137570785 to 137570808 23 - TSS region transcription start site region 63895
Tssr63896 6 137570812 to 137570831 19 - TSS region transcription start site region 63896
Tssr63897 6 137571007 to 137571032 25 - TSS region transcription start site region 63897
Tssr63898 6 137571038 to 137571054 16 - TSS region transcription start site region 63898
Gm44106 6 137591977 to 137593575 1598 - unclassified gene predicted gene, 44106
Tssr63899 6 137630281 to 137630282 1 - TSS region transcription start site region 63899
Cpgi18116 6 137648318 to 137649798 1480 CpG island CpG island 18116
Tssr63900 6 137649178 to 137649192 14 - TSS region transcription start site region 63900
Tssr63901 6 137649211 to 137649294 83 - TSS region transcription start site region 63901
Gm38915 6 137703145 to 137717430 14285 + lncRNA gene predicted gene, 38915
Cpgi18117 6 137734724 to 137735977 1253 CpG island CpG island 18117
Strap 6 137735082 to 137751930 16848 + protein coding gene serine/threonine kinase receptor associated protein
Tssr59380 6 137735102 to 137735151 49 + TSS region transcription start site region 59380
Tssr2046 6 137735162 to 137735167 5 + TSS region transcription start site region 2046
Tssr59381 6 137735182 to 137735189 7 + TSS region transcription start site region 59381
Tssr59382 6 137745569 to 137745581 12 + TSS region transcription start site region 59382
Cpgi18118 6 137754431 to 137754942 511 CpG island CpG island 18118
Tssr59383 6 137754529 to 137754599 70 + TSS region transcription start site region 59383
Dera 6 137754577 to 137837872 83295 + protein coding gene deoxyribose-phosphate aldolase (putative)
Tssr59384 6 137754602 to 137754608 6 + TSS region transcription start site region 59384
Tssr59385 6 137772005 to 137772009 4 + TSS region transcription start site region 59385
Tssr59386 6 137782915 to 137782934 19 + TSS region transcription start site region 59386
Cpgi18119 6 137846223 to 137846479 256 CpG island CpG island 18119
Gm38552 6 137856678 to 137868642 11964 + lncRNA gene predicted gene, 38552
D6Mit302 6 137874356 to 137874468 112 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 302
Gm24308 6 137919858 to 137919971 113 - miRNA gene predicted gene, 24308
Cpgi18120 6 137948227 to 137948530 303 CpG island CpG island 18120
Slc15a5 6 137983586 to 138079916 96330 - protein coding gene solute carrier family 15, member 5
Tssr59387 6 138115097 to 138115101 4 + TSS region transcription start site region 59387
Tssr59388 6 138140298 to 138140320 22 + TSS region transcription start site region 59388
Tssr59389 6 138140344 to 138140360 16 + TSS region transcription start site region 59389
Tssr59390 6 138140521 to 138140581 60 + TSS region transcription start site region 59390
Mgst1 6 138140537 to 138156755 16218 + protein coding gene microsomal glutathione S-transferase 1
Tssr59391 6 138141569 to 138141617 48 + TSS region transcription start site region 59391
Tssr59392 6 138141648 to 138141669 21 + TSS region transcription start site region 59392
Tssr59393 6 138142853 to 138142863 10 + TSS region transcription start site region 59393
Tssr59394 6 138147683 to 138147700 17 + TSS region transcription start site region 59394
Tssr59395 6 138147713 to 138147744 31 + TSS region transcription start site region 59395
Tssr59396 6 138150803 to 138150834 31 + TSS region transcription start site region 59396
Tssr59397 6 138151124 to 138151155 31 + TSS region transcription start site region 59397
Tssr59398 6 138156296 to 138156308 12 + TSS region transcription start site region 59398
Tssr59399 6 138156704 to 138156716 12 + TSS region transcription start site region 59399
Gm30213 6 138166555 to 138177815 11260 + lncRNA gene predicted gene, 30213
D0Nds42 6 138172277 to 138172370 93 DNA segment DNA segment, Nuffield Department of Surgery 42
Tssr59400 6 138325311 to 138325318 7 + TSS region transcription start site region 59400
Lmo3 6 138362918 to 138581968 219050 - protein coding gene LIM domain only 3
Tssr63902 6 138421379 to 138421405 26 - TSS region transcription start site region 63902
Cpgi18121 6 138422093 to 138422498 405 CpG island CpG island 18121
Tssr59401 6 138422235 to 138422246 11 + TSS region transcription start site region 59401
Tssr63903 6 138422513 to 138422522 9 - TSS region transcription start site region 63903
Tssr63904 6 138422530 to 138422543 13 - TSS region transcription start site region 63904
Tssr63905 6 138422864 to 138422894 30 - TSS region transcription start site region 63905
Tssr63906 6 138422898 to 138422915 17 - TSS region transcription start site region 63906
Tssr63907 6 138423094 to 138423144 50 - TSS region transcription start site region 63907
A830011K09Rik 6 138423105 to 138429592 6487 + antisense lncRNA gene RIKEN cDNA A830011K09 gene
Tssr63908 6 138424593 to 138424611 18 - TSS region transcription start site region 63908
Tssr63909 6 138426692 to 138426701 9 - TSS region transcription start site region 63909
Tssr63910 6 138426735 to 138426747 12 - TSS region transcription start site region 63910
Tssr63911 6 138427076 to 138427100 24 - TSS region transcription start site region 63911
Gm30332 6 138443973 to 138461615 17642 + antisense lncRNA gene predicted gene, 30332
Tssr2047 6 138563002 to 138563007 5 + TSS region transcription start site region 2047
B230110G15Rik 6 138580624 to 138599314 18690 + antisense lncRNA gene RIKEN cDNA B230110G15 gene
Gm44266 6 138600842 to 138601341 499 + unclassified gene predicted gene, 44266
Igbp1b 6 138657089 to 138658444 1355 - protein coding gene immunoglobulin (CD79A) binding protein 1b
Cpgi18122 6 138657631 to 138658403 772 CpG island CpG island 18122
Tssr63912 6 138658449 to 138658456 7 - TSS region transcription start site region 63912
Tssr59402 6 138727884 to 138727887 3 + TSS region transcription start site region 59402
D6Mit199 6 138816252 to 138816391 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 199
D6Mit199.1 6 138816441 to 138816601 160 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 199.1
Gm9038 6 138859521 to 138860124 603 - pseudogene predicted gene 9038
Gm30583 6 138873581 to 138892752 19171 + lncRNA gene predicted gene, 30583
D6Mit59 6 138976326 to 138976494 168 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 59
Gm44267 6 139137127 to 139137511 384 + unclassified gene predicted gene, 44267
Gm44268 6 139140770 to 139140933 163 + unclassified gene predicted gene, 44268
Gm25434 6 139196065 to 139196231 166 - snoRNA gene predicted gene, 25434
4922502N22Rik 6 139315597 to 139322576 6979 - lincRNA gene RIKEN cDNA 4922502N22 gene
Tssr2048 6 139321956 to 139321959 3 + TSS region transcription start site region 2048
Rergl 6 139493182 to 139501909 8727 - protein coding gene RERG/RAS-like
Tssr63913 6 139501883 to 139501902 19 - TSS region transcription start site region 63913
Tssr63914 6 139501907 to 139501918 11 - TSS region transcription start site region 63914
Tssr63915 6 139501921 to 139501933 12 - TSS region transcription start site region 63915
4930404I20Rik 6 139555559 to 139557611 2052 - lincRNA gene RIKEN cDNA 4930404I20 gene
4930443G03Rik 6 139575924 to 139577205 1281 - unclassified gene RIKEN cDNA 4930443G03 gene
Tssr59403 6 139587198 to 139587230 32 + TSS region transcription start site region 59403
Tssr59404 6 139599477 to 139599501 24 + TSS region transcription start site region 59404
Pik3c2g 6 139614072 to 139969284 355212 + protein coding gene phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma
Tssr59405 6 139662684 to 139662696 12 + TSS region transcription start site region 59405
Gm37269 6 139776430 to 139778320 1890 + unclassified gene predicted gene, 37269
Gm43940 6 139830387 to 139830551 164 + unclassified gene predicted gene, 43940
Tssr59406 6 139841652 to 139841658 6 + TSS region transcription start site region 59406
Tssr59407 6 139896711 to 139896714 3 + TSS region transcription start site region 59407
Gm29930 6 139965545 to 139971786 6241 - lncRNA gene predicted gene, 29930
Plcz1 6 139989673 to 140041457 51784 - protein coding gene phospholipase C, zeta 1
Gm44112 6 140033161 to 140033532 371 - pseudogene predicted gene, 44112
Tssr63916 6 140041409 to 140041466 57 - TSS region transcription start site region 63916
Tssr63917 6 140041473 to 140041476 3 - TSS region transcription start site region 63917
Tssr59408 6 140041519 to 140041530 11 + TSS region transcription start site region 59408
Capza3 6 140041525 to 140042789 1264 + protein coding gene capping protein (actin filament) muscle Z-line, alpha 3
Tssr59409 6 140041534 to 140041537 3 + TSS region transcription start site region 59409
Tssr59410 6 140041549 to 140041562 13 + TSS region transcription start site region 59410
Gm45959 6 140046012 to 140069807 23795 - lncRNA gene predicted gene, 45959
D6Dcr26 6 140054282 to 140054379 97 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 26
Gm44156 6 140056401 to 140057589 1188 - pseudogene predicted gene, 44156
Gm44155 6 140057583 to 140057994 411 + pseudogene predicted gene, 44155
Gm44158 6 140069994 to 140070498 504 - pseudogene predicted gene, 44158
Gm30056 6 140092113 to 140101197 9084 - lncRNA gene predicted gene, 30056
Tssr63918 6 140101134 to 140101149 15 - TSS region transcription start site region 63918
Tssr63919 6 140101153 to 140101160 7 - TSS region transcription start site region 63919
Tssr63920 6 140101163 to 140101172 9 - TSS region transcription start site region 63920
Gm44159 6 140132067 to 140132508 441 + pseudogene predicted gene, 44159
Cpgi18123 6 140143880 to 140144109 229 CpG island CpG island 18123
Gm24174 6 140166535 to 140166645 110 - rRNA gene predicted gene, 24174
D6Mit292.2 6 140189684 to 140189794 110 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 292.2
D6Mit292 6 140189764 to 140189885 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 292
D6Mit292.1 6 140189880 to 140189988 108 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 292.1
Gm38917 6 140272410 to 140285735 13325 - lncRNA gene predicted gene, 38917
Gm3961 6 140295463 to 140296456 993 - unclassified gene predicted gene 3961
Cpgi18124 6 140296009 to 140296384 375 CpG island CpG island 18124
1700102F20Rik 6 140309071 to 140309740 669 + unclassified gene RIKEN cDNA 1700102F20 gene
n-R5s168 6 140319630 to 140319733 103 + rRNA gene nuclear encoded rRNA 5S 168
Cpgi18125 6 140385792 to 140385980 188 CpG island CpG island 18125
Tssr63921 6 140398118 to 140398139 21 - TSS region transcription start site region 63921
Gm5051 6 140420171 to 140420655 484 + pseudogene predicted gene 5051
Cpgi18126 6 140423602 to 140425095 1493 CpG island CpG island 18126
Tssr59411 6 140423911 to 140423960 49 + TSS region transcription start site region 59411
Tssr59412 6 140424046 to 140424082 36 + TSS region transcription start site region 59412
Plekha5 6 140424054 to 140597110 173056 + protein coding gene pleckstrin homology domain containing, family A member 5
Tssr59413 6 140424086 to 140424138 52 + TSS region transcription start site region 59413
Tssr59414 6 140424154 to 140424166 12 + TSS region transcription start site region 59414
Tssr59415 6 140432962 to 140432984 22 + TSS region transcription start site region 59415
Tssr59416 6 140479776 to 140479788 12 + TSS region transcription start site region 59416
Tssr59417 6 140479805 to 140479824 19 + TSS region transcription start site region 59417
Tssr59418 6 140479825 to 140479836 11 + TSS region transcription start site region 59418
Tssr59419 6 140491024 to 140491046 22 + TSS region transcription start site region 59419
Tssr59420 6 140491064 to 140491073 9 + TSS region transcription start site region 59420
Cpgi18127 6 140491092 to 140491249 157 CpG island CpG island 18127
Tssr59421 6 140491116 to 140491127 11 + TSS region transcription start site region 59421
Tssr63922 6 140513698 to 140513702 4 - TSS region transcription start site region 63922
Tssr59422 6 140514916 to 140514950 34 + TSS region transcription start site region 59422
Tssr59423 6 140516434 to 140516443 9 + TSS region transcription start site region 59423
Tssr59424 6 140527013 to 140527018 5 + TSS region transcription start site region 59424
Tssr59425 6 140530960 to 140530964 4 + TSS region transcription start site region 59425
Gm25780 6 140530963 to 140531215 252 + unclassified non-coding RNA gene predicted gene, 25780
Tssr59426 6 140591607 to 140591617 10 + TSS region transcription start site region 59426
Tssr59427 6 140591627 to 140591641 14 + TSS region transcription start site region 59427
Tssr59428 6 140591644 to 140591662 18 + TSS region transcription start site region 59428
Tssr2049 6 140601688 to 140601693 5 + TSS region transcription start site region 2049
Tssr59429 6 140607498 to 140607521 23 + TSS region transcription start site region 59429
Tssr63923 6 140613927 to 140613933 6 - TSS region transcription start site region 63923
Gm44013 6 140620162 to 140622423 2261 - unclassified gene predicted gene, 44013
Tssr63924 6 140620587 to 140620607 20 - TSS region transcription start site region 63924
Tssr59430 6 140621046 to 140621055 9 + TSS region transcription start site region 59430
Tssr59431 6 140621088 to 140621108 20 + TSS region transcription start site region 59431
Tssr59432 6 140621115 to 140621146 31 + TSS region transcription start site region 59432
Tssr59433 6 140622607 to 140622627 20 + TSS region transcription start site region 59433
Tssr59434 6 140622640 to 140622659 19 + TSS region transcription start site region 59434
Aebp2 6 140622663 to 140678472 55809 + protein coding gene AE binding protein 2
Tssr59435 6 140622695 to 140622708 13 + TSS region transcription start site region 59435
Cpgi18128 6 140622911 to 140625077 2166 CpG island CpG island 18128
Tssr59436 6 140623476 to 140623615 139 + TSS region transcription start site region 59436