Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:136774147-137564889

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150 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cmv3 6 128834894 to 137439929 8605035 QTL cytomegalovirus resistance 3
Gucy2c 6 136697284 to 136781742 84458 - protein coding gene guanylate cyclase 2c
Cpgi18107 6 136781377 to 136781634 257 CpG island CpG island 18107
Tssr63829 6 136781718 to 136781806 88 - TSS region transcription start site region 63829
Tssr63830 6 136781812 to 136781829 17 - TSS region transcription start site region 63830
Gm40411 6 136798333 to 136799018 685 + lncRNA gene predicted gene, 40411
Cpgi18108 6 136803803 to 136804499 696 CpG island CpG island 18108
Tssr59332 6 136803942 to 136803959 17 + TSS region transcription start site region 59332
Hist4h4 6 136803993 to 136804431 438 - protein coding gene histone cluster 4, H4
Tssr63831 6 136804414 to 136804419 5 - TSS region transcription start site region 63831
Gm43969 6 136804681 to 136805215 534 + unclassified gene predicted gene, 43969
Cpgi18109 6 136807707 to 136809434 1727 CpG island CpG island 18109
Tssr63832 6 136808056 to 136808070 14 - TSS region transcription start site region 63832
Tssr59333 6 136808222 to 136808228 6 + TSS region transcription start site region 59333
Tssr59334 6 136808248 to 136808261 13 + TSS region transcription start site region 59334
H2afj 6 136808248 to 136810074 1826 + protein coding gene H2A histone family, member J
Tssr59335 6 136808263 to 136808345 82 + TSS region transcription start site region 59335
Tssr2043 6 136808357 to 136808366 9 + TSS region transcription start site region 2043
Gm44364 6 136808543 to 136808683 140 - miRNA gene predicted gene, 44364
Tssr59336 6 136809591 to 136809603 12 + TSS region transcription start site region 59336
Wbp11 6 136813654 to 136828216 14562 - protein coding gene WW domain binding protein 11
Tssr63833 6 136821562 to 136821591 29 - TSS region transcription start site region 63833
Tssr63834 6 136826021 to 136826033 12 - TSS region transcription start site region 63834
Tssr63835 6 136826093 to 136826096 3 - TSS region transcription start site region 63835
Cpgi18110 6 136827569 to 136828423 854 CpG island CpG island 18110
BC049715 6 136827626 to 136840662 13036 + protein coding gene cDNA sequence BC049715
Tssr63836 6 136827714 to 136827744 30 - TSS region transcription start site region 63836
Tssr59337 6 136827745 to 136827760 15 + TSS region transcription start site region 59337
Tssr63837 6 136827747 to 136827761 14 - TSS region transcription start site region 63837
Tssr59338 6 136827761 to 136827798 37 + TSS region transcription start site region 59338
Tssr63838 6 136827766 to 136827769 3 - TSS region transcription start site region 63838
Tssr59339 6 136827799 to 136827811 12 + TSS region transcription start site region 59339
Tssr63839 6 136827820 to 136827825 5 - TSS region transcription start site region 63839
Tssr59340 6 136827830 to 136827839 9 + TSS region transcription start site region 59340
Tssr63840 6 136828051 to 136828062 11 - TSS region transcription start site region 63840
Tssr63841 6 136828124 to 136828179 55 - TSS region transcription start site region 63841
Tssr63842 6 136828186 to 136828197 11 - TSS region transcription start site region 63842
Tssr59341 6 136828414 to 136828456 42 + TSS region transcription start site region 59341
Tssr2044 6 136828457 to 136828480 23 + TSS region transcription start site region 2044
Tssr59342 6 136828812 to 136828825 13 + TSS region transcription start site region 59342
Smco3 6 136829931 to 136835450 5519 - protein coding gene single-pass membrane protein with coiled-coil domains 3
Tssr59343 6 136831897 to 136831937 40 + TSS region transcription start site region 59343
Tssr63843 6 136835397 to 136835424 27 - TSS region transcription start site region 63843
Tssr63844 6 136835426 to 136835447 21 - TSS region transcription start site region 63844
Gm44069 6 136847744 to 136848249 505 - unclassified gene predicted gene, 44069
Art4 6 136848451 to 136857600 9149 - protein coding gene ADP-ribosyltransferase 4
Tssr63845 6 136854402 to 136854408 6 - TSS region transcription start site region 63845
Tssr63846 6 136857248 to 136857260 12 - TSS region transcription start site region 63846
Tssr63847 6 136857418 to 136857451 33 - TSS region transcription start site region 63847
Tssr63848 6 136857522 to 136857534 12 - TSS region transcription start site region 63848
Tssr63849 6 136857547 to 136857562 15 - TSS region transcription start site region 63849
Tssr63850 6 136857590 to 136857610 20 - TSS region transcription start site region 63850
Tssr63851 6 136857629 to 136857646 17 - TSS region transcription start site region 63851
Tssr63852 6 136857649 to 136857678 29 - TSS region transcription start site region 63852
Tssr63853 6 136857691 to 136857708 17 - TSS region transcription start site region 63853
Tssr63854 6 136857727 to 136857750 23 - TSS region transcription start site region 63854
Tssr63855 6 136857796 to 136857827 31 - TSS region transcription start site region 63855
Tssr59344 6 136861853 to 136861856 3 + TSS region transcription start site region 59344
Tssr59345 6 136872434 to 136872438 4 + TSS region transcription start site region 59345
Mgp 6 136872435 to 136875805 3370 - protein coding gene matrix Gla protein
Tssr63856 6 136872495 to 136872506 11 - TSS region transcription start site region 63856
Tssr63857 6 136872731 to 136872749 18 - TSS region transcription start site region 63857
Tssr59346 6 136872731 to 136872755 24 + TSS region transcription start site region 59346
Tssr63858 6 136872771 to 136872791 20 - TSS region transcription start site region 63858
Tssr59347 6 136873164 to 136873187 23 + TSS region transcription start site region 59347
Tssr59348 6 136873199 to 136873210 11 + TSS region transcription start site region 59348
Tssr63859 6 136875794 to 136875811 17 - TSS region transcription start site region 63859
Erp27 6 136907311 to 136922180 14869 - protein coding gene endoplasmic reticulum protein 27
Tssr63860 6 136922152 to 136922167 15 - TSS region transcription start site region 63860
Tssr63861 6 136922169 to 136922198 29 - TSS region transcription start site region 63861
Tssr63862 6 136922200 to 136922220 20 - TSS region transcription start site region 63862
Arhgdib 6 136923655 to 136941899 18244 - protein coding gene Rho, GDP dissociation inhibitor (GDI) beta
Tssr59349 6 136923921 to 136923934 13 + TSS region transcription start site region 59349
Tssr63863 6 136924007 to 136924023 16 - TSS region transcription start site region 63863
Tssr59350 6 136924031 to 136924052 21 + TSS region transcription start site region 59350
Tssr63864 6 136924035 to 136924089 54 - TSS region transcription start site region 63864
Tssr63865 6 136924112 to 136924128 16 - TSS region transcription start site region 63865
Tssr63866 6 136924184 to 136924199 15 - TSS region transcription start site region 63866
Tssr63867 6 136924213 to 136924232 19 - TSS region transcription start site region 63867
Tssr63868 6 136924270 to 136924283 13 - TSS region transcription start site region 63868
Tssr63869 6 136924317 to 136924334 17 - TSS region transcription start site region 63869
Tssr59351 6 136938996 to 136939015 19 + TSS region transcription start site region 59351
Tssr63870 6 136939566 to 136939622 56 - TSS region transcription start site region 63870
Tssr63871 6 136941462 to 136941492 30 - TSS region transcription start site region 63871
Tssr63872 6 136941494 to 136941505 11 - TSS region transcription start site region 63872
Tssr63873 6 136941524 to 136941538 14 - TSS region transcription start site region 63873
Tssr63874 6 136941694 to 136941726 32 - TSS region transcription start site region 63874
Tssr63875 6 136941833 to 136941842 9 - TSS region transcription start site region 63875
Tssr63876 6 136941845 to 136941856 11 - TSS region transcription start site region 63876
Tssr63877 6 136941859 to 136941884 25 - TSS region transcription start site region 63877
Tssr63878 6 136941887 to 136941911 24 - TSS region transcription start site region 63878
Tssr59352 6 136943643 to 136943652 9 + TSS region transcription start site region 59352
Tssr63879 6 136947043 to 136947048 5 - TSS region transcription start site region 63879
Pde6h 6 136952218 to 136963485 11267 + protein coding gene phosphodiesterase 6H, cGMP-specific, cone, gamma
Tssr59353 6 136954521 to 136954529 8 + TSS region transcription start site region 59353
Tssr63880 6 136967625 to 136967666 41 - TSS region transcription start site region 63880
Gm30055 6 136986596 to 136987398 802 + lncRNA gene predicted gene, 30055
Rerg 6 137054825 to 137170496 115671 - protein coding gene RAS-like, estrogen-regulated, growth-inhibitor
Cpgi18111 6 137056157 to 137056519 362 CpG island CpG island 18111
Tssr59354 6 137102488 to 137102490 2 + TSS region transcription start site region 59354
Cpgi18112 6 137118080 to 137118436 356 CpG island CpG island 18112
Tssr59355 6 137136549 to 137136552 3 + TSS region transcription start site region 59355
Gm38914 6 137139899 to 137157270 17371 + lncRNA gene predicted gene, 38914
4930480K02Rik 6 137145876 to 137146929 1053 - unclassified gene RIKEN cDNA 4930480K02 gene
Cpgi18113 6 137155271 to 137155463 192 CpG island CpG island 18113
Cpgi18114 6 137169147 to 137169889 742 CpG island CpG island 18114
Tssr63881 6 137169678 to 137169706 28 - TSS region transcription start site region 63881
Tssr63882 6 137169710 to 137169723 13 - TSS region transcription start site region 63882
Tssr63883 6 137169748 to 137169762 14 - TSS region transcription start site region 63883
Cpgi18115 6 137252226 to 137253182 956 CpG island CpG island 18115
Tssr59356 6 137252277 to 137252294 17 + TSS region transcription start site region 59356
Tssr59357 6 137252297 to 137252326 29 + TSS region transcription start site region 59357
Ptpro 6 137252319 to 137463233 210914 + protein coding gene protein tyrosine phosphatase, receptor type, O
Tssr59358 6 137252338 to 137252354 16 + TSS region transcription start site region 59358
Tssr59359 6 137252366 to 137252388 22 + TSS region transcription start site region 59359
Tssr59360 6 137252392 to 137252423 31 + TSS region transcription start site region 59360
Tssr59361 6 137252429 to 137252474 45 + TSS region transcription start site region 59361
Tssr59362 6 137252480 to 137252503 23 + TSS region transcription start site region 59362
Tssr59363 6 137252504 to 137252515 11 + TSS region transcription start site region 59363
Tssr59364 6 137252535 to 137252544 9 + TSS region transcription start site region 59364
Tssr59365 6 137376544 to 137376577 33 + TSS region transcription start site region 59365
Tssr59366 6 137386591 to 137386594 3 + TSS region transcription start site region 59366
Tssr59367 6 137410720 to 137410723 3 + TSS region transcription start site region 59367
Tssr59368 6 137410731 to 137410740 9 + TSS region transcription start site region 59368
Tssr59369 6 137410746 to 137410772 26 + TSS region transcription start site region 59369
Tssr59370 6 137410775 to 137410788 13 + TSS region transcription start site region 59370
Tssr59371 6 137410835 to 137410838 3 + TSS region transcription start site region 59371
Tssr59372 6 137410845 to 137410852 7 + TSS region transcription start site region 59372
Tssr59373 6 137410986 to 137411024 38 + TSS region transcription start site region 59373
Tssr59374 6 137411056 to 137411071 15 + TSS region transcription start site region 59374
Tssr59375 6 137425321 to 137425337 16 + TSS region transcription start site region 59375
Tssr59376 6 137425357 to 137425370 13 + TSS region transcription start site region 59376
Gm44258 6 137431305 to 137431605 300 + sense intronic lncRNA gene predicted gene, 44258
D6Mit291 6 137439808 to 137439929 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 291
Bulb2 6 137439808 to 137439929 121 QTL bulb size 2
Tssr59377 6 137459291 to 137459315 24 + TSS region transcription start site region 59377
Tssr59378 6 137464452 to 137464453 1 + TSS region transcription start site region 59378
Eps8 6 137477245 to 137649397 172152 - protein coding gene epidermal growth factor receptor pathway substrate 8
Tssr63884 6 137487217 to 137487221 4 - TSS region transcription start site region 63884
Tssr63885 6 137505427 to 137505440 13 - TSS region transcription start site region 63885
Tssr63886 6 137516995 to 137517019 24 - TSS region transcription start site region 63886
Tssr63887 6 137519741 to 137519742 1 - TSS region transcription start site region 63887
Tssr63888 6 137519871 to 137519876 5 - TSS region transcription start site region 63888
Tssr63889 6 137519880 to 137519900 20 - TSS region transcription start site region 63889
Tssr63890 6 137537659 to 137537678 19 - TSS region transcription start site region 63890
Tssr63891 6 137537763 to 137537776 13 - TSS region transcription start site region 63891
Tssr63892 6 137537782 to 137537795 13 - TSS region transcription start site region 63892
Tssr59379 6 137537928 to 137537934 6 + TSS region transcription start site region 59379
Tssr2045 6 137545234 to 137545235 1 + TSS region transcription start site region 2045
Tssr63893 6 137563572 to 137563577 5 - TSS region transcription start site region 63893