Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:136748414-136908456

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gucy2c 6 136697284 to 136781742 84458 - protein coding gene guanylate cyclase 2c
Cpgi18107 6 136781377 to 136781634 257 CpG island CpG island 18107
Tssr63829 6 136781718 to 136781806 88 - TSS region transcription start site region 63829
Tssr63830 6 136781812 to 136781829 17 - TSS region transcription start site region 63830
Gm40411 6 136798333 to 136799018 685 + lncRNA gene predicted gene, 40411
Cpgi18108 6 136803803 to 136804499 696 CpG island CpG island 18108
Tssr59332 6 136803942 to 136803959 17 + TSS region transcription start site region 59332
Hist4h4 6 136803993 to 136804431 438 - protein coding gene histone cluster 4, H4
Tssr63831 6 136804414 to 136804419 5 - TSS region transcription start site region 63831
Gm43969 6 136804681 to 136805215 534 + unclassified gene predicted gene, 43969
Cpgi18109 6 136807707 to 136809434 1727 CpG island CpG island 18109
Tssr63832 6 136808056 to 136808070 14 - TSS region transcription start site region 63832
Tssr59333 6 136808222 to 136808228 6 + TSS region transcription start site region 59333
Tssr59334 6 136808248 to 136808261 13 + TSS region transcription start site region 59334
H2afj 6 136808248 to 136810074 1826 + protein coding gene H2A histone family, member J
Tssr59335 6 136808263 to 136808345 82 + TSS region transcription start site region 59335
Tssr2043 6 136808357 to 136808366 9 + TSS region transcription start site region 2043
Gm44364 6 136808543 to 136808683 140 - miRNA gene predicted gene, 44364
Tssr59336 6 136809591 to 136809603 12 + TSS region transcription start site region 59336
Wbp11 6 136813654 to 136828216 14562 - protein coding gene WW domain binding protein 11
Tssr63833 6 136821562 to 136821591 29 - TSS region transcription start site region 63833
Tssr63834 6 136826021 to 136826033 12 - TSS region transcription start site region 63834
Tssr63835 6 136826093 to 136826096 3 - TSS region transcription start site region 63835
Cpgi18110 6 136827569 to 136828423 854 CpG island CpG island 18110
BC049715 6 136827626 to 136840662 13036 + protein coding gene cDNA sequence BC049715
Tssr63836 6 136827714 to 136827744 30 - TSS region transcription start site region 63836
Tssr59337 6 136827745 to 136827760 15 + TSS region transcription start site region 59337
Tssr63837 6 136827747 to 136827761 14 - TSS region transcription start site region 63837
Tssr59338 6 136827761 to 136827798 37 + TSS region transcription start site region 59338
Tssr63838 6 136827766 to 136827769 3 - TSS region transcription start site region 63838
Tssr59339 6 136827799 to 136827811 12 + TSS region transcription start site region 59339
Tssr63839 6 136827820 to 136827825 5 - TSS region transcription start site region 63839
Tssr59340 6 136827830 to 136827839 9 + TSS region transcription start site region 59340
Tssr63840 6 136828051 to 136828062 11 - TSS region transcription start site region 63840
Tssr63841 6 136828124 to 136828179 55 - TSS region transcription start site region 63841
Tssr63842 6 136828186 to 136828197 11 - TSS region transcription start site region 63842
Tssr59341 6 136828414 to 136828456 42 + TSS region transcription start site region 59341
Tssr2044 6 136828457 to 136828480 23 + TSS region transcription start site region 2044
Tssr59342 6 136828812 to 136828825 13 + TSS region transcription start site region 59342
Smco3 6 136829931 to 136835450 5519 - protein coding gene single-pass membrane protein with coiled-coil domains 3
Tssr59343 6 136831897 to 136831937 40 + TSS region transcription start site region 59343
Tssr63843 6 136835397 to 136835424 27 - TSS region transcription start site region 63843
Tssr63844 6 136835426 to 136835447 21 - TSS region transcription start site region 63844
Gm44069 6 136847744 to 136848249 505 - unclassified gene predicted gene, 44069
Art4 6 136848451 to 136857600 9149 - protein coding gene ADP-ribosyltransferase 4
Tssr63845 6 136854402 to 136854408 6 - TSS region transcription start site region 63845
Tssr63846 6 136857248 to 136857260 12 - TSS region transcription start site region 63846
Tssr63847 6 136857418 to 136857451 33 - TSS region transcription start site region 63847
Tssr63848 6 136857522 to 136857534 12 - TSS region transcription start site region 63848
Tssr63849 6 136857547 to 136857562 15 - TSS region transcription start site region 63849
Tssr63850 6 136857590 to 136857610 20 - TSS region transcription start site region 63850
Tssr63851 6 136857629 to 136857646 17 - TSS region transcription start site region 63851
Tssr63852 6 136857649 to 136857678 29 - TSS region transcription start site region 63852
Tssr63853 6 136857691 to 136857708 17 - TSS region transcription start site region 63853
Tssr63854 6 136857727 to 136857750 23 - TSS region transcription start site region 63854
Tssr63855 6 136857796 to 136857827 31 - TSS region transcription start site region 63855
Tssr59344 6 136861853 to 136861856 3 + TSS region transcription start site region 59344
Tssr59345 6 136872434 to 136872438 4 + TSS region transcription start site region 59345
Mgp 6 136872435 to 136875805 3370 - protein coding gene matrix Gla protein
Tssr63856 6 136872495 to 136872506 11 - TSS region transcription start site region 63856
Tssr63857 6 136872731 to 136872749 18 - TSS region transcription start site region 63857
Tssr59346 6 136872731 to 136872755 24 + TSS region transcription start site region 59346
Tssr63858 6 136872771 to 136872791 20 - TSS region transcription start site region 63858
Tssr59347 6 136873164 to 136873187 23 + TSS region transcription start site region 59347
Tssr59348 6 136873199 to 136873210 11 + TSS region transcription start site region 59348
Tssr63859 6 136875794 to 136875811 17 - TSS region transcription start site region 63859
Erp27 6 136907311 to 136922180 14869 - protein coding gene endoplasmic reticulum protein 27