Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:136413230-136521408

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pabr1 6 103777444 to 136423692 32646248 QTL plasma apolipoprotein B (human) regulator 1
Aaj3 6 104503360 to 136423692 31920332 QTL anxiety in A/J 3
E330021D16Rik 6 136400317 to 136415569 15252 - protein coding gene RIKEN cDNA E330021D16 gene
Tssr63797 6 136415567 to 136415572 5 - TSS region transcription start site region 63797
Tssr59310 6 136417811 to 136417816 5 + TSS region transcription start site region 59310
Gm25882 6 136417812 to 136417896 84 + snRNA gene predicted gene, 25882
D6Mit339 6 136423576 to 136423692 116 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 339
D6Mit339.2 6 136423667 to 136423781 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 339.2
Tabw2 6 136423692 to 46935985 -89487707 QTL tally ho associated body weight 2
Gm36844 6 136448887 to 136454720 5833 - lncRNA gene predicted gene, 36844
Tssr63798 6 136449311 to 136449330 19 - TSS region transcription start site region 63798
Tssr63799 6 136449346 to 136449357 11 - TSS region transcription start site region 63799
Tssr63800 6 136449450 to 136449463 13 - TSS region transcription start site region 63800
Gm36897 6 136463230 to 136471408 8178 + lncRNA gene predicted gene, 36897
Tssr59311 6 136463669 to 136463693 24 + TSS region transcription start site region 59311
Tssr59312 6 136470565 to 136470589 24 + TSS region transcription start site region 59312
Gm6728 6 136486125 to 136487186 1061 - pseudogene predicted gene 6728
Cpgi18103 6 136486985 to 136487228 243 CpG island CpG island 18103
Gm44131 6 136488319 to 136488712 393 + pseudogene predicted gene, 44131
Tssr59313 6 136488733 to 136488769 36 + TSS region transcription start site region 59313
Rpl36a-ps3 6 136488807 to 136489127 320 + pseudogene ribosomal protein L36A, pseudogene 3
Tssr63801 6 136497896 to 136497900 4 - TSS region transcription start site region 63801
Tssr63802 6 136499716 to 136499720 4 - TSS region transcription start site region 63802
Tssr59314 6 136501072 to 136501076 4 + TSS region transcription start site region 59314
Gm44140 6 136514976 to 136519031 4055 - bidirectional promoter lncRNA gene predicted gene, 44140
Tssr63803 6 136518498 to 136518501 3 - TSS region transcription start site region 63803
Cpgi18104 6 136518601 to 136519340 739 CpG island CpG island 18104
Tssr63804 6 136518761 to 136518772 11 - TSS region transcription start site region 63804
Tssr59315 6 136518786 to 136518810 24 + TSS region transcription start site region 59315
Atf7ip 6 136518807 to 136610850 92043 + protein coding gene activating transcription factor 7 interacting protein
Tssr59316 6 136518820 to 136518851 31 + TSS region transcription start site region 59316
Tssr59317 6 136518866 to 136518875 9 + TSS region transcription start site region 59317
Tssr63805 6 136519058 to 136519077 19 - TSS region transcription start site region 63805
Tssr59318 6 136520403 to 136520407 4 + TSS region transcription start site region 59318