Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:136317811-136517816

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pabr1 6 103777444 to 136423692 32646248 QTL plasma apolipoprotein B (human) regulator 1
Aaj3 6 104503360 to 136423692 31920332 QTL anxiety in A/J 3
Gm8994 6 136327539 to 136329983 2444 + protein coding gene predicted gene 8994
Tssr59308 6 136328517 to 136328527 10 + TSS region transcription start site region 59308
Cpgi18100 6 136328542 to 136328781 239 CpG island CpG island 18100
Gm15476 6 136383728 to 136384918 1190 + pseudogene predicted gene 15476
Tssr59309 6 136398422 to 136398425 3 + TSS region transcription start site region 59309
Tubb3-ps1 6 136398435 to 136400135 1700 + pseudogene tubulin, beta 3 class III, pseudogene 1
Cpgi18101 6 136399207 to 136399551 344 CpG island CpG island 18101
E330021D16Rik 6 136400317 to 136415569 15252 - protein coding gene RIKEN cDNA E330021D16 gene
Cpgi18102 6 136401484 to 136401869 385 CpG island CpG island 18102
Tssr63797 6 136415567 to 136415572 5 - TSS region transcription start site region 63797
Tssr59310 6 136417811 to 136417816 5 + TSS region transcription start site region 59310
Gm25882 6 136417812 to 136417896 84 + snRNA gene predicted gene, 25882
D6Mit339 6 136423576 to 136423692 116 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 339
D6Mit339.2 6 136423667 to 136423781 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 339.2
Tabw2 6 136423692 to 46935985 -89487707 QTL tally ho associated body weight 2
Gm36844 6 136448887 to 136454720 5833 - lncRNA gene predicted gene, 36844
Tssr63798 6 136449311 to 136449330 19 - TSS region transcription start site region 63798
Tssr63799 6 136449346 to 136449357 11 - TSS region transcription start site region 63799
Tssr63800 6 136449450 to 136449463 13 - TSS region transcription start site region 63800
Gm36897 6 136463230 to 136471408 8178 + lncRNA gene predicted gene, 36897
Tssr59311 6 136463669 to 136463693 24 + TSS region transcription start site region 59311
Tssr59312 6 136470565 to 136470589 24 + TSS region transcription start site region 59312
Gm6728 6 136486125 to 136487186 1061 - pseudogene predicted gene 6728
Cpgi18103 6 136486985 to 136487228 243 CpG island CpG island 18103
Gm44131 6 136488319 to 136488712 393 + pseudogene predicted gene, 44131
Tssr59313 6 136488733 to 136488769 36 + TSS region transcription start site region 59313
Rpl36a-ps3 6 136488807 to 136489127 320 + pseudogene ribosomal protein L36A, pseudogene 3
Tssr63801 6 136497896 to 136497900 4 - TSS region transcription start site region 63801
Tssr63802 6 136499716 to 136499720 4 - TSS region transcription start site region 63802
Tssr59314 6 136501072 to 136501076 4 + TSS region transcription start site region 59314
Gm44140 6 136514976 to 136519031 4055 - bidirectional promoter lncRNA gene predicted gene, 44140