Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:13613316-14613431

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bmt2 6 13625675 to 13677966 52291 - protein coding gene base methyltransferase of 25S rRNA 2
Tssr59836 6 13650969 to 13650988 19 - TSS region transcription start site region 59836
Tssr59837 6 13654130 to 13654157 27 - TSS region transcription start site region 59837
Cpgi17166 6 13677056 to 13678363 1307 CpG island CpG island 17166
Tssr59838 6 13677890 to 13677895 5 - TSS region transcription start site region 59838
Tssr59839 6 13677907 to 13677923 16 - TSS region transcription start site region 59839
Tssr59840 6 13677930 to 13677974 44 - TSS region transcription start site region 59840
Tssr54955 6 13682626 to 13682632 6 + TSS region transcription start site region 54955
Gm40354 6 13749475 to 13776712 27237 + lncRNA gene predicted gene, 40354
Gm38766 6 13824157 to 13832041 7884 - lncRNA gene predicted gene, 38766
Tssr59841 6 13829017 to 13829020 3 - TSS region transcription start site region 59841
Gpr85 6 13834454 to 13839937 5483 - protein coding gene G protein-coupled receptor 85
Tssr59842 6 13838097 to 13838107 10 - TSS region transcription start site region 59842
Tssr59843 6 13838432 to 13838442 10 - TSS region transcription start site region 59843
Cpgi17167 6 13838497 to 13839180 683 CpG island CpG island 17167
Tssr59844 6 13838574 to 13838618 44 - TSS region transcription start site region 59844
Tssr59845 6 13838652 to 13838689 37 - TSS region transcription start site region 59845
Tssr54956 6 13838679 to 13838701 22 + TSS region transcription start site region 54956
Tssr54957 6 13838728 to 13838742 14 + TSS region transcription start site region 54957
Tssr59846 6 13839180 to 13839210 30 - TSS region transcription start site region 59846
Tssr59847 6 13839318 to 13839340 22 - TSS region transcription start site region 59847
Tssr59848 6 13839424 to 13839438 14 - TSS region transcription start site region 59848
Tssr59849 6 13839486 to 13839510 24 - TSS region transcription start site region 59849
Tssr59850 6 13839519 to 13839534 15 - TSS region transcription start site region 59850
Tssr59851 6 13839895 to 13839908 13 - TSS region transcription start site region 59851
Tssr59852 6 13839916 to 13839941 25 - TSS region transcription start site region 59852
2610001J05Rik 6 13869074 to 13871483 2409 - protein coding gene RIKEN cDNA 2610001J05 gene
Tssr59853 6 13871073 to 13871129 56 - TSS region transcription start site region 59853
Tssr59854 6 13871167 to 13871176 9 - TSS region transcription start site region 59854
Tssr59855 6 13871459 to 13871471 12 - TSS region transcription start site region 59855
Tssr59856 6 13871477 to 13871487 10 - TSS region transcription start site region 59856
Tssr54958 6 13871517 to 13871562 45 + TSS region transcription start site region 54958
1110019D14Rik 6 13871569 to 13896421 24852 + lincRNA gene RIKEN cDNA 1110019D14 gene
Tssr59857 6 13871687 to 13871707 20 - TSS region transcription start site region 59857
Tssr59858 6 13872284 to 13872298 14 - TSS region transcription start site region 59858
Tssr59859 6 13872305 to 13872316 11 - TSS region transcription start site region 59859
Tssr59860 6 13872319 to 13872345 26 - TSS region transcription start site region 59860
Gm44412 6 13913155 to 13913448 293 - pseudogene predicted gene, 44412
Gm44411 6 14006007 to 14006355 348 + pseudogene predicted gene, 44411
Gm38767 6 14018525 to 14045525 27000 + lncRNA gene predicted gene, 38767
Gm19252 6 14081331 to 14081635 304 - pseudogene predicted gene, 19252
Gm23760 6 14113316 to 14113431 115 + snoRNA gene predicted gene, 23760
Gm8820 6 14389481 to 14390044 563 - pseudogene predicted gene 8820
Gm23013 6 14457045 to 14457150 105 - snRNA gene predicted gene, 23013
Tssr54959 6 14512588 to 14512601 13 + TSS region transcription start site region 54959
Gm44446 6 14570771 to 14571025 254 - pseudogene predicted gene, 44446
Tssr54960 6 14608327 to 14608350 23 + TSS region transcription start site region 54960
Tssr54961 6 14608423 to 14608432 9 + TSS region transcription start site region 54961
Gm38768 6 14608451 to 14611644 3193 + lncRNA gene predicted gene, 38768