Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:134925319-135205965

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdkn1b 6 134920401 to 134925513 5112 + protein coding gene cyclin-dependent kinase inhibitor 1B
Cpgi18081 6 134926726 to 134927728 1002 CpG island CpG island 18081
Cpgi18082 6 134928059 to 134928867 808 CpG island CpG island 18082
Tssr63744 6 134928445 to 134928463 18 - TSS region transcription start site region 63744
Gm44238 6 134928992 to 134930112 1120 - lincRNA gene predicted gene, 44238
Tssr59269 6 134929089 to 134929103 14 + TSS region transcription start site region 59269
Lockd 6 134929092 to 134951718 22626 + lincRNA gene lncRNA downstream of Cdkn1b
Tssr59270 6 134929118 to 134929164 46 + TSS region transcription start site region 59270
Tssr2036 6 134935143 to 134935162 19 + TSS region transcription start site region 2036
Tssr59271 6 134936870 to 134936874 4 + TSS region transcription start site region 59271
Tssr59272 6 134937742 to 134937746 4 + TSS region transcription start site region 59272
Tssr59273 6 134939428 to 134939433 5 + TSS region transcription start site region 59273
Tssr59274 6 134948869 to 134948873 4 + TSS region transcription start site region 59274
Tssr59275 6 134981920 to 134981953 33 + TSS region transcription start site region 59275
Tssr59276 6 134981998 to 134982002 4 + TSS region transcription start site region 59276
Apold1 6 134982001 to 134986836 4835 + protein coding gene apolipoprotein L domain containing 1
Gm36428 6 134982136 to 134983587 1451 - lncRNA gene predicted gene, 36428
Cpgi18083 6 134983238 to 134984283 1045 CpG island CpG island 18083
Cpgi18084 6 135011449 to 135011928 479 CpG island CpG island 18084
Tssr59277 6 135011609 to 135011640 31 + TSS region transcription start site region 59277
Ddx47 6 135011612 to 135023776 12164 + protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Tssr59278 6 135018159 to 135018170 11 + TSS region transcription start site region 59278
Cpgi18085 6 135040433 to 135040618 185 CpG island CpG island 18085
Cpgi18086 6 135065319 to 135065965 646 CpG island CpG island 18086
Gprc5a 6 135065662 to 135084709 19047 + protein coding gene G protein-coupled receptor, family C, group 5, member A
Tssr59279 6 135065666 to 135065682 16 + TSS region transcription start site region 59279
Tssr59280 6 135078671 to 135078709 38 + TSS region transcription start site region 59280
Tssr59281 6 135078711 to 135078769 58 + TSS region transcription start site region 59281
Cpgi18087 6 135078792 to 135079357 565 CpG island CpG island 18087
Tssr59282 6 135084070 to 135084083 13 + TSS region transcription start site region 59282
Tssr59283 6 135084172 to 135084195 23 + TSS region transcription start site region 59283
Gprc5d 6 135105991 to 135118283 12292 - protein coding gene G protein-coupled receptor, family C, group 5, member D
Tssr63745 6 135117982 to 135117985 3 - TSS region transcription start site region 63745
Tssr63746 6 135118240 to 135118252 12 - TSS region transcription start site region 63746
Gm29803 6 135134078 to 135134452 374 - pseudogene predicted gene, 29803
Hebp1 6 135137519 to 135168215 30696 - protein coding gene heme binding protein 1
Tssr63747 6 135138736 to 135138740 4 - TSS region transcription start site region 63747
Gm22881 6 135148648 to 135148781 133 + snoRNA gene predicted gene, 22881
Cpgi18088 6 135167766 to 135168421 655 CpG island CpG island 18088
Tssr63748 6 135168108 to 135168121 13 - TSS region transcription start site region 63748
Tssr63749 6 135168131 to 135168161 30 - TSS region transcription start site region 63749
Tssr63750 6 135168162 to 135168210 48 - TSS region transcription start site region 63750
Gm34391 6 135171199 to 135172105 906 - pseudogene predicted gene, 34391
Gm19434 6 135188480 to 135194959 6479 + antisense lncRNA gene predicted gene, 19434
Gm36533 6 135193701 to 135197962 4261 - lncRNA gene predicted gene, 36533
Tssr59284 6 135196880 to 135196906 26 + TSS region transcription start site region 59284
Cpgi18089 6 135197572 to 135198565 993 CpG island CpG island 18089
Tssr63751 6 135197918 to 135197963 45 - TSS region transcription start site region 63751
Fam234b 6 135197967 to 135236242 38275 + protein coding gene family with sequence similarity 234, member B
Tssr2037 6 135197981 to 135197992 11 + TSS region transcription start site region 2037
Tssr59285 6 135198010 to 135198023 13 + TSS region transcription start site region 59285
Tssr59286 6 135198034 to 135198062 28 + TSS region transcription start site region 59286
Tssr59287 6 135203440 to 135203444 4 + TSS region transcription start site region 59287