Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:134495770-134715771

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrp6 6 134446476 to 134566965 120489 - protein coding gene low density lipoprotein receptor-related protein 6
Tssr63719 6 134517446 to 134517450 4 - TSS region transcription start site region 63719
Tssr63720 6 134539518 to 134539522 4 - TSS region transcription start site region 63720
Tssr63721 6 134558732 to 134558737 5 - TSS region transcription start site region 63721
D230041D01Rik 6 134559178 to 134563749 4571 unclassified gene RIKEN cDNA D230041D01 gene
Cpgi18073 6 134566048 to 134567464 1416 CpG island CpG island 18073
Tssr63722 6 134566801 to 134566812 11 - TSS region transcription start site region 63722
Tssr63723 6 134566817 to 134566845 28 - TSS region transcription start site region 63723
Tssr63724 6 134566861 to 134566875 14 - TSS region transcription start site region 63724
Tssr63725 6 134566884 to 134566908 24 - TSS region transcription start site region 63725
Tssr63726 6 134566916 to 134566995 79 - TSS region transcription start site region 63726
Tssr2035 6 134567231 to 134567249 18 - TSS region transcription start site region 2035
Gm38910 6 134605234 to 134607681 2447 - lincRNA gene predicted gene, 38910
Tssr59244 6 134605770 to 134605771 1 + TSS region transcription start site region 59244
Mansc1 6 134609207 to 134632488 23281 - protein coding gene MANSC domain containing 1
Gm43952 6 134624982 to 134625732 750 + unclassified gene predicted gene, 43952
Cpgi18074 6 134632112 to 134632789 677 CpG island CpG island 18074
Tssr63727 6 134632362 to 134632380 18 - TSS region transcription start site region 63727
Tssr63728 6 134632388 to 134632404 16 - TSS region transcription start site region 63728
Borcs5 6 134639512 to 134711184 71672 + protein coding gene BLOC-1 related complex subunit 5
Cpgi18075 6 134640825 to 134641579 754 CpG island CpG island 18075
Tssr59245 6 134640979 to 134641014 35 + TSS region transcription start site region 59245
Tssr59246 6 134641019 to 134641097 78 + TSS region transcription start site region 59246
Tssr59247 6 134641099 to 134641117 18 + TSS region transcription start site region 59247
Tssr63729 6 134645937 to 134645947 10 - TSS region transcription start site region 63729
Gm44017 6 134689859 to 134691302 1443 + sense intronic lncRNA gene predicted gene, 44017
Tssr59248 6 134696019 to 134696022 3 + TSS region transcription start site region 59248
Recrq9 6 134700000 to 73500000 -61200000 QTL recombination rate in male meiosis QTL 9
Dusp16 6 134715468 to 134792625 77157 - protein coding gene dual specificity phosphatase 16