Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:132952049-134512378

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Btts 6 125356646 to 134119623 8762977 QTL bitterness tasting
Tas2r129 6 132951102 to 132952064 962 + protein coding gene taste receptor, type 2, member 129
Tas2r131 6 132956912 to 132957844 932 - protein coding gene taste receptor, type 2, member 131
Gm40405 6 132963463 to 132965214 1751 - lncRNA gene predicted gene, 40405
Gm44425 6 132974377 to 132974805 428 + pseudogene predicted gene, 44425
Tas2r109 6 132980015 to 132980965 950 - protein coding gene taste receptor, type 2, member 109
Gm44426 6 132997753 to 132998107 354 + pseudogene predicted gene, 44426
Gm18689 6 133001748 to 133002649 901 - pseudogene predicted gene, 18689
Gm18690 6 133017394 to 133018378 984 - pseudogene predicted gene, 18690
Tas2r103 6 133036163 to 133037101 938 - protein coding gene taste receptor, type 2, member 103
Tas2r140 6 133054855 to 133055793 938 - protein coding gene taste receptor, type 2, member 140
Gm35765 6 133063016 to 133085284 22268 - lncRNA gene predicted gene, 35765
Gm18691 6 133087115 to 133087855 740 - pseudogene predicted gene, 18691
Gm8921 6 133092181 to 133092829 648 + pseudogene predicted gene 8921
Tas2r141-ps4 6 133095066 to 133095931 865 - pseudogene taste receptor, type 2, member 141, pseudogene 4
Smim10l1 6 133104909 to 133110899 5990 + protein coding gene small integral membrane protein 10 like 1
Cpgi18068 6 133104966 to 133105834 868 CpG island CpG island 18068
Tssr59207 6 133105199 to 133105208 9 + TSS region transcription start site region 59207
Tssr59208 6 133105240 to 133105319 79 + TSS region transcription start site region 59208
Tssr63705 6 133105648 to 133105679 31 - TSS region transcription start site region 63705
Tssr2032 6 133105819 to 133105832 13 + TSS region transcription start site region 2032
Tssr59209 6 133106352 to 133106367 15 + TSS region transcription start site region 59209
Gm45769 6 133110474 to 133112301 1827 + unclassified gene predicted gene 45769
Gm7039 6 133113928 to 133114273 345 - pseudogene predicted gene 7039
Tssr59210 6 133115277 to 133115291 14 + TSS region transcription start site region 59210
Gm23403 6 133191792 to 133191901 109 + miRNA gene predicted gene, 23403
Gm25019 6 133196640 to 133196749 109 + miRNA gene predicted gene, 25019
5530400C23Rik 6 133292216 to 133295790 3574 + protein coding gene RIKEN cDNA 5530400C23 gene
Gm34149 6 133309929 to 133312011 2082 + pseudogene predicted gene, 34149
Gm44239 6 133379384 to 133381019 1635 - pseudogene predicted gene, 44239
Tssr63706 6 133381051 to 133381058 7 - TSS region transcription start site region 63706
Gm5885 6 133529189 to 133532762 3573 + pseudogene predicted gene 5885
Gm44245 6 133563937 to 133564168 231 - pseudogene predicted gene, 44245
Gm34224 6 133597285 to 133599305 2020 + pseudogene predicted gene, 34224
Gm34314 6 133617235 to 133619197 1962 - pseudogene predicted gene, 34314
Tssr59211 6 133699965 to 133699972 7 + TSS region transcription start site region 59211
Gm46987 6 133701186 to 133719651 18465 + lncRNA gene predicted gene, 46987
Gm44247 6 133706870 to 133707146 276 + unclassified gene predicted gene, 44247
Gm44252 6 133732049 to 133732378 329 - pseudogene predicted gene, 44252
Gm6375 6 133761445 to 133763062 1617 - pseudogene predicted gene 6375
Gm23375 6 133761688 to 133761770 82 - miRNA gene predicted gene, 23375
Gm5886 6 133763999 to 133767404 3405 - pseudogene predicted gene 5886
Tssr63707 6 133767409 to 133767414 5 - TSS region transcription start site region 63707
Kap 6 133849855 to 133853667 3812 - protein coding gene kidney androgen regulated protein
Tssr63708 6 133849876 to 133849884 8 - TSS region transcription start site region 63708
Tssr59212 6 133851928 to 133851948 20 + TSS region transcription start site region 59212
Tssr63709 6 133851973 to 133851976 3 - TSS region transcription start site region 63709
Tssr63710 6 133851977 to 133851989 12 - TSS region transcription start site region 63710
Tssr63711 6 133852007 to 133852019 12 - TSS region transcription start site region 63711
Tssr63712 6 133852089 to 133852090 1 - TSS region transcription start site region 63712
D6Uwa8 6 133852549 to 133852756 207 DNA segment DNA segment, Chr 6, University of Western Australia 8
D6Mit111 6 133852888 to 133853029 141 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 111
Skmw15 6 133852888 to 133853029 141 QTL skeletal muscle weight 15
Tssr63713 6 133853650 to 133853673 23 - TSS region transcription start site region 63713
Gm43968 6 133864054 to 133864720 666 + pseudogene predicted gene, 43968
Tssr63714 6 133864993 to 133865005 12 - TSS region transcription start site region 63714
Gm8956 6 133931587 to 133932409 822 - pseudogene predicted gene 8956
D6Mit290 6 133986464 to 133986588 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 290
Gm46977 6 134018144 to 134035302 17158 - protein coding gene predicted gene, 46977
Tssr2033 6 134020860 to 134020869 9 - TSS region transcription start site region 2033
Tssr2034 6 134034086 to 134034103 17 + TSS region transcription start site region 2034
Cpgi18069 6 134034870 to 134036340 1470 CpG island CpG island 18069
Tssr59213 6 134035016 to 134035038 22 + TSS region transcription start site region 59213
Tssr59214 6 134035639 to 134035689 50 + TSS region transcription start site region 59214
Tssr59215 6 134035691 to 134035717 26 + TSS region transcription start site region 59215
Etv6 6 134035700 to 134270158 234458 + protein coding gene ets variant 6
Tssr59216 6 134035772 to 134035783 11 + TSS region transcription start site region 59216
Tssr59217 6 134035821 to 134035897 76 + TSS region transcription start site region 59217
Tssr59218 6 134035953 to 134035973 20 + TSS region transcription start site region 59218
Tssr59219 6 134035975 to 134036011 36 + TSS region transcription start site region 59219
Tssr59220 6 134036024 to 134036034 10 + TSS region transcription start site region 59220
Tssr59221 6 134036070 to 134036104 34 + TSS region transcription start site region 59221
Tssr59222 6 134042265 to 134042274 9 + TSS region transcription start site region 59222
Tssr59223 6 134043831 to 134043865 34 + TSS region transcription start site region 59223
Tssr59224 6 134045449 to 134045472 23 + TSS region transcription start site region 59224
Tssr63715 6 134045629 to 134045652 23 - TSS region transcription start site region 63715
Tssr59225 6 134045903 to 134045932 29 + TSS region transcription start site region 59225
Tssr59226 6 134056157 to 134056166 9 + TSS region transcription start site region 59226
Gm43982 6 134073354 to 134075182 1828 + unclassified gene predicted gene, 43982
Tssr59227 6 134079611 to 134079615 4 + TSS region transcription start site region 59227
Tssr59228 6 134079658 to 134079671 13 + TSS region transcription start site region 59228
Athsq2 6 134082986 to 134083123 137 QTL atherosclerosis susceptibility QTL 2
D6Mit110 6 134082986 to 134083123 137 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 110
Gm43984 6 134084601 to 134087464 2863 + unclassified gene predicted gene, 43984
Tssr59229 6 134106263 to 134106275 12 + TSS region transcription start site region 59229
Gm46978 6 134111096 to 134114422 3326 + lncRNA gene predicted gene, 46978
Tssr59230 6 134115226 to 134115257 31 + TSS region transcription start site region 59230
D6Mit374a 6 134119450 to 134119623 173 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 374a
Lvic3 6 134119450 to 136045152 1925702 QTL liver iron content 3
D6Mit374b 6 134119484 to 134119623 139 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 374b
Tssr59231 6 134144659 to 134144660 1 + TSS region transcription start site region 59231
D6Ertd131e 6 134146786 to 134147021 235 DNA segment DNA segment, Chr 6, ERATO Doi 131, expressed
Tssr59232 6 134152274 to 134152278 4 + TSS region transcription start site region 59232
Gm17088 6 134168879 to 134172007 3128 - antisense lncRNA gene predicted gene 17088
D6Mit220.2 6 134184609 to 134184720 111 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 220.2
D6Mit220 6 134184701 to 134184819 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 220
Tssr59233 6 134190060 to 134190062 2 + TSS region transcription start site region 59233
Gm38908 6 134219321 to 134222858 3537 - lncRNA gene predicted gene, 38908
Tssr59234 6 134222935 to 134222940 5 + TSS region transcription start site region 59234
Tssr63716 6 134243522 to 134243527 5 - TSS region transcription start site region 63716
1700051K13Rik 6 134245671 to 134246366 695 - unclassified gene RIKEN cDNA 1700051K13 gene
Gm17089 6 134246607 to 134248799 2192 - antisense lncRNA gene predicted gene 17089
Cpgi18070 6 134248292 to 134248835 543 CpG island CpG island 18070
Tssr63717 6 134248804 to 134248815 11 - TSS region transcription start site region 63717
Tssr63718 6 134262037 to 134262047 10 - TSS region transcription start site region 63718
Tssr59235 6 134262421 to 134262423 2 + TSS region transcription start site region 59235
4933406J09Rik 6 134308951 to 134403415 94464 - antisense lncRNA gene RIKEN cDNA 4933406J09 gene
Cpgi18071 6 134388638 to 134388906 268 CpG island CpG island 18071
Tssr59236 6 134396316 to 134396319 3 + TSS region transcription start site region 59236
Tssr59237 6 134396321 to 134396338 17 + TSS region transcription start site region 59237
Bcl2l14 6 134396329 to 134438724 42395 + protein coding gene BCL2-like 14 (apoptosis facilitator)
Gm44448 6 134404077 to 134424353 20276 - lincRNA gene predicted gene, 44448
Tssr59238 6 134414423 to 134414435 12 + TSS region transcription start site region 59238
Tssr59239 6 134414436 to 134414458 22 + TSS region transcription start site region 59239
Tssr59240 6 134414459 to 134414485 26 + TSS region transcription start site region 59240
Tssr59241 6 134414490 to 134414512 22 + TSS region transcription start site region 59241
Tssr59242 6 134431860 to 134431867 7 + TSS region transcription start site region 59242
Cpgi18072 6 134439479 to 134439668 189 CpG island CpG island 18072
Lrp6 6 134446476 to 134566965 120489 - protein coding gene low density lipoprotein receptor-related protein 6
Tssr59243 6 134451139 to 134451146 7 + TSS region transcription start site region 59243