Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:131227753-134768107

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288 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhr5 6 115717516 to 132601187 16883671 QTL bronchial hyperresponsiveness 5
Btts 6 125356646 to 134119623 8762977 QTL bitterness tasting
Klra2 6 131219223 to 131247362 28139 - protein coding gene killer cell lectin-like receptor, subfamily A, member 2
Tssr63671 6 131243956 to 131243966 10 - TSS region transcription start site region 63671
Tssr63672 6 131245249 to 131245283 34 - TSS region transcription start site region 63672
Tssr63673 6 131247342 to 131247367 25 - TSS region transcription start site region 63673
Gm5582 6 131253528 to 131254049 521 - pseudogene predicted gene 5582
Gm44182 6 131270429 to 131270543 114 - pseudogene predicted gene, 44182
Magohb 6 131284389 to 131293244 8855 - protein coding gene mago homolog B, exon junction complex core component
Gm44958 6 131291603 to 131292338 735 - pseudogene predicted gene 44958
Cpgi18064 6 131292872 to 131293441 569 CpG island CpG island 18064
Tssr63674 6 131293157 to 131293168 11 - TSS region transcription start site region 63674
Tssr63675 6 131293187 to 131293248 61 - TSS region transcription start site region 63675
Styk1 6 131299133 to 131317015 17882 - protein coding gene serine/threonine/tyrosine kinase 1
Tssr63676 6 131316046 to 131316049 3 - TSS region transcription start site region 63676
Tssr63677 6 131348366 to 131348377 11 - TSS region transcription start site region 63677
Tssr63678 6 131348379 to 131348392 13 - TSS region transcription start site region 63678
Tssr63679 6 131353534 to 131353555 21 - TSS region transcription start site region 63679
Tssr63680 6 131353557 to 131353610 53 - TSS region transcription start site region 63680
Ybx3 6 131364858 to 131388450 23592 - protein coding gene Y box protein 3
Tssr59195 6 131365283 to 131365333 50 + TSS region transcription start site region 59195
Tssr63681 6 131365347 to 131365374 27 - TSS region transcription start site region 63681
Tssr63682 6 131367820 to 131367864 44 - TSS region transcription start site region 63682
Tssr63683 6 131368099 to 131368110 11 - TSS region transcription start site region 63683
Tssr63684 6 131368423 to 131368436 13 - TSS region transcription start site region 63684
Tssr63685 6 131368468 to 131368499 31 - TSS region transcription start site region 63685
Tssr63686 6 131368508 to 131368524 16 - TSS region transcription start site region 63686
Tssr63687 6 131368542 to 131368567 25 - TSS region transcription start site region 63687
Tssr63688 6 131370365 to 131370380 15 - TSS region transcription start site region 63688
Cpgi18065 6 131375935 to 131376174 239 CpG island CpG island 18065
Tssr63689 6 131376035 to 131376055 20 - TSS region transcription start site region 63689
Tssr63690 6 131376087 to 131376103 16 - TSS region transcription start site region 63690
Tssr63691 6 131379420 to 131379442 22 - TSS region transcription start site region 63691
Gm22362 6 131380273 to 131380406 133 - snoRNA gene predicted gene, 22362
Tssr59196 6 131380870 to 131380888 18 + TSS region transcription start site region 59196
Tssr59197 6 131380907 to 131380919 12 + TSS region transcription start site region 59197
Tssr63692 6 131383764 to 131383809 45 - TSS region transcription start site region 63692
Tssr63693 6 131385840 to 131385843 3 - TSS region transcription start site region 63693
Cpgi18066 6 131387370 to 131388843 1473 CpG island CpG island 18066
Tssr63694 6 131388260 to 131388344 84 - TSS region transcription start site region 63694
Tssr63695 6 131388345 to 131388365 20 - TSS region transcription start site region 63695
Tssr63696 6 131388382 to 131388397 15 - TSS region transcription start site region 63696
Tssr63697 6 131388417 to 131388464 47 - TSS region transcription start site region 63697
Tssr63698 6 131388465 to 131388476 11 - TSS region transcription start site region 63698
Gm18688 6 131432070 to 131433865 1795 - pseudogene predicted gene, 18688
Cpgi18067 6 131433525 to 131434074 549 CpG island CpG island 18067
D6Ott113 6 131477422 to 131477706 284 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 113
Gm6619 6 131486422 to 131491435 5013 + protein coding gene predicted gene 6619
Gm22190 6 131532922 to 131533031 109 + miRNA gene predicted gene, 22190
5430401F13Rik 6 131543762 to 131553757 9995 + protein coding gene RIKEN cDNA 5430401F13 gene
Gm16571 6 131585110 to 131590261 5151 + pseudogene predicted gene 16571
Hmgb1l 6 131608301 to 131608871 570 - pseudogene high mobility group box 1-like
Gm43943 6 131613688 to 131613800 112 + pseudogene predicted gene, 43943
Tas2r130 6 131629892 to 131630830 938 - protein coding gene taste receptor, type 2, member 130
D6Ott115 6 131632272 to 131632447 175 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 115
Tas2r107 6 131659118 to 131660149 1031 - protein coding gene taste receptor, type 2, member 107
Tas2r106 6 131677960 to 131678886 926 - protein coding gene taste receptor, type 2, member 106
Tas2r104 6 131684836 to 131685744 908 - protein coding gene taste receptor, type 2, member 104
Tas2r105 6 131686561 to 131687463 902 - protein coding gene taste receptor, type 2, member 105
Tas2r114 6 131689134 to 131690063 929 - protein coding gene taste receptor, type 2, member 114
Tssr59198 6 131782168 to 131782176 8 + TSS region transcription start site region 59198
D6Wum20 6 131833191 to 131833319 128 DNA segment DNA segment, Chr 6, Washington University School of Medicine 20
Tssr59199 6 131837164 to 131837191 27 + TSS region transcription start site region 59199
Tssr59200 6 131837445 to 131837488 43 + TSS region transcription start site region 59200
Gm43973 6 131880668 to 131880877 209 + pseudogene predicted gene, 43973
D6Wum18 6 131937025 to 131937388 363 DNA segment DNA segment, Chr 6, Washington University School of Medicine 18
Gm43974 6 131940936 to 131941619 683 - lincRNA gene predicted gene, 43974
D6Wum16 6 131956012 to 131956298 286 DNA segment DNA segment, Chr 6, Washington University School of Medicine 16
Prb3-ps 6 132055403 to 132056513 1110 - pseudogene proline-rich protein BstNI subfamily 3, pseudogene
Gm43975 6 132069305 to 132069785 480 - pseudogene predicted gene, 43975
Gm4736 6 132114576 to 132117662 3086 - pseudogene predicted gene 4736
Gm43976 6 132135455 to 132135689 234 - pseudogene predicted gene, 43976
Gm43978 6 132140165 to 132140615 450 - pseudogene predicted gene, 43978
Gm18912 6 132163521 to 132229055 65534 - pseudogene predicted gene, 18912
Prb1 6 132206795 to 132210521 3726 - protein coding gene proline-rich protein BstNI subfamily 1
Gm44687 6 132228839 to 132229073 234 - pseudogene predicted gene 44687
Gm43979 6 132233522 to 132233996 474 - pseudogene predicted gene, 43979
Shm5 6 132289569 to 145656013 13366444 QTL sperm head morphology 5
D6Mit219a 6 132289569 to 132289756 187 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 219a
Prpmp5 6 132311590 to 132314743 3153 - protein coding gene proline-rich protein MP5
Tssr2031 6 132314751 to 132314757 6 - TSS region transcription start site region 2031
Gm44990 6 132333590 to 132333806 216 - pseudogene predicted gene 44990
Gm20951 6 132333608 to 132384045 50437 - pseudogene predicted gene, 20951
Gm44727 6 132338858 to 132339308 450 - pseudogene predicted gene 44727
Gm8882 6 132361105 to 132364134 3029 - protein coding gene predicted gene 8882
Tssr63699 6 132364129 to 132364135 6 - TSS region transcription start site region 63699
Gm44726 6 132383828 to 132384044 216 - pseudogene predicted gene 44726
Gm44003 6 132388886 to 132389375 489 - pseudogene predicted gene, 44003
D6Mit219b 6 132435189 to 132435375 186 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 219b
Gm5154 6 132438531 to 132441722 3191 - pseudogene predicted gene 5154
Tssr59201 6 132439539 to 132439542 3 + TSS region transcription start site region 59201
Tssr63700 6 132439714 to 132439718 4 - TSS region transcription start site region 63700
Tssr63701 6 132439741 to 132439769 28 - TSS region transcription start site region 63701
Tssr63702 6 132441745 to 132441752 7 - TSS region transcription start site region 63702
Gm45063 6 132462502 to 132462973 471 - pseudogene predicted gene 45063
Gm18326 6 132462521 to 132473772 11251 - pseudogene predicted gene, 18326
Gm44952 6 132473338 to 132473770 432 - pseudogene predicted gene 44952
Tssr59202 6 132507758 to 132507762 4 + TSS region transcription start site region 59202
Gm44070 6 132525033 to 132527252 2219 + unclassified gene predicted gene, 44070
n-R5s166 6 132564972 to 132565092 120 + rRNA gene nuclear encoded rRNA 5S 166
Tssr59203 6 132569804 to 132569809 5 + TSS region transcription start site region 59203
Rua 6 132569842 to 132572401 2559 QTL raffinose acetate tasting
Qui 6 132569842 to 132572401 2559 QTL quinine sensitivity, taste
Cyx 6 132569842 to 132572401 2559 QTL cycloheximide tasting
Prh1 6 132569842 to 132572401 2559 + protein coding gene proline rich protein HaeIII subfamily 1
Tssr59204 6 132572019 to 132572062 43 + TSS region transcription start site region 59204
Tssr59205 6 132572145 to 132572156 11 + TSS region transcription start site region 59205
Tssr63703 6 132572182 to 132572184 2 - TSS region transcription start site region 63703
D6Mit13.1a 6 132572631 to 132572762 131 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13.1a
n-R5s167 6 132591058 to 132591178 120 + rRNA gene nuclear encoded rRNA 5S 167
Tssr59206 6 132595909 to 132595913 4 + TSS region transcription start site region 59206
Prp2 6 132595946 to 132600702 4756 + protein coding gene proline rich protein 2
D6Mit13.1b 6 132600933 to 132601066 133 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13.1b
Etohcta6 6 132601042 to 132601187 145 QTL ethanol conditioned taste aversion 6
Mop1 6 132601042 to 146429238 13828196 QTL morphine preference 1
D6Mit13 6 132601042 to 132601187 145 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13
D6Mit13.2 6 132601162 to 132601273 111 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13.2
A630073D07Rik 6 132625111 to 132627511 2400 - protein coding gene RIKEN cDNA A630073D07 gene
Tssr63704 6 132627512 to 132627516 4 - TSS region transcription start site region 63704
Tas2r120 6 132656957 to 132657844 887 + protein coding gene taste receptor, type 2, member 120
Tas2r121 6 132700090 to 132701007 917 - protein coding gene taste receptor, type 2, member 121
Tas2r122 6 132710999 to 132711928 929 - protein coding gene taste receptor, type 2, member 122
Tas2r115 6 132737054 to 132737986 932 - protein coding gene taste receptor, type 2, member 115
Gm44137 6 132746272 to 132746638 366 - pseudogene predicted gene, 44137
Tas2r124 6 132754730 to 132755659 929 + protein coding gene taste receptor, type 2, member 124
Gm44138 6 132760705 to 132760975 270 + pseudogene predicted gene, 44138
Tas2r102 6 132762131 to 132763174 1043 + protein coding gene taste receptor, type 2, member 102
Tas2r136 6 132777179 to 132778162 983 - protein coding gene taste receptor, type 2, member 136
Tas2r145-ps3 6 132786734 to 132787698 964 + pseudogene taste receptor, type 2, member 145, pseudogene 3
Tas2r117 6 132802901 to 132803893 992 + protein coding gene taste receptor, type 2, member 117
Tas2r111-ps2 6 132820318 to 132821218 900 + pseudogene taste receptor, type 2, member 111, pseudogene 2
Gm44139 6 132824866 to 132825238 372 - pseudogene predicted gene, 44139
Tas2r123 6 132847142 to 132848143 1001 + protein coding gene taste receptor, type 2, member 123
Tas2r116 6 132855438 to 132856355 917 + protein coding gene taste receptor, type 2, member 116
Gm44142 6 132860465 to 132860775 310 + unclassified gene predicted gene, 44142
Tas2r110 6 132868008 to 132869009 1001 + protein coding gene taste receptor, type 2, member 110
Tas2r113 6 132893011 to 132893940 929 + protein coding gene taste receptor, type 2, member 113
Tas2r142-ps5 6 132901963 to 132902891 928 + pseudogene taste receptor, type 2, member 142, pseudogene 5
Tas2r125 6 132909651 to 132910586 935 + protein coding gene taste receptor, type 2, member 125
Tas2r146-ps1 6 132933967 to 132934900 933 + pseudogene taste receptor, type 2, member 146, pseudogene 1
Tas2r129 6 132951102 to 132952064 962 + protein coding gene taste receptor, type 2, member 129
Tas2r131 6 132956912 to 132957844 932 - protein coding gene taste receptor, type 2, member 131
Gm40405 6 132963463 to 132965214 1751 - lncRNA gene predicted gene, 40405
Gm44425 6 132974377 to 132974805 428 + pseudogene predicted gene, 44425
Tas2r109 6 132980015 to 132980965 950 - protein coding gene taste receptor, type 2, member 109
Gm44426 6 132997753 to 132998107 354 + pseudogene predicted gene, 44426
Gm18689 6 133001748 to 133002649 901 - pseudogene predicted gene, 18689
Gm18690 6 133017394 to 133018378 984 - pseudogene predicted gene, 18690
Tas2r103 6 133036163 to 133037101 938 - protein coding gene taste receptor, type 2, member 103
Tas2r140 6 133054855 to 133055793 938 - protein coding gene taste receptor, type 2, member 140
Gm35765 6 133063016 to 133085284 22268 - lncRNA gene predicted gene, 35765
Gm18691 6 133087115 to 133087855 740 - pseudogene predicted gene, 18691
Gm8921 6 133092181 to 133092829 648 + pseudogene predicted gene 8921
Tas2r141-ps4 6 133095066 to 133095931 865 - pseudogene taste receptor, type 2, member 141, pseudogene 4
Smim10l1 6 133104909 to 133110899 5990 + protein coding gene small integral membrane protein 10 like 1
Cpgi18068 6 133104966 to 133105834 868 CpG island CpG island 18068
Tssr59207 6 133105199 to 133105208 9 + TSS region transcription start site region 59207
Tssr59208 6 133105240 to 133105319 79 + TSS region transcription start site region 59208
Tssr63705 6 133105648 to 133105679 31 - TSS region transcription start site region 63705
Tssr2032 6 133105819 to 133105832 13 + TSS region transcription start site region 2032
Tssr59209 6 133106352 to 133106367 15 + TSS region transcription start site region 59209
Gm45769 6 133110474 to 133112301 1827 + unclassified gene predicted gene 45769
Gm7039 6 133113928 to 133114273 345 - pseudogene predicted gene 7039
Tssr59210 6 133115277 to 133115291 14 + TSS region transcription start site region 59210
Gm23403 6 133191792 to 133191901 109 + miRNA gene predicted gene, 23403
Gm25019 6 133196640 to 133196749 109 + miRNA gene predicted gene, 25019
5530400C23Rik 6 133292216 to 133295790 3574 + protein coding gene RIKEN cDNA 5530400C23 gene
Gm34149 6 133309929 to 133312011 2082 + pseudogene predicted gene, 34149
Gm44239 6 133379384 to 133381019 1635 - pseudogene predicted gene, 44239
Tssr63706 6 133381051 to 133381058 7 - TSS region transcription start site region 63706
Gm5885 6 133529189 to 133532762 3573 + pseudogene predicted gene 5885
Gm44245 6 133563937 to 133564168 231 - pseudogene predicted gene, 44245
Gm34224 6 133597285 to 133599305 2020 + pseudogene predicted gene, 34224
Gm34314 6 133617235 to 133619197 1962 - pseudogene predicted gene, 34314
Tssr59211 6 133699965 to 133699972 7 + TSS region transcription start site region 59211
Gm46987 6 133701186 to 133719651 18465 + lncRNA gene predicted gene, 46987
Gm44247 6 133706870 to 133707146 276 + unclassified gene predicted gene, 44247
Gm44252 6 133732049 to 133732378 329 - pseudogene predicted gene, 44252
Gm6375 6 133761445 to 133763062 1617 - pseudogene predicted gene 6375
Gm23375 6 133761688 to 133761770 82 - miRNA gene predicted gene, 23375
Gm5886 6 133763999 to 133767404 3405 - pseudogene predicted gene 5886
Tssr63707 6 133767409 to 133767414 5 - TSS region transcription start site region 63707
Kap 6 133849855 to 133853667 3812 - protein coding gene kidney androgen regulated protein
Tssr63708 6 133849876 to 133849884 8 - TSS region transcription start site region 63708
Tssr59212 6 133851928 to 133851948 20 + TSS region transcription start site region 59212
Tssr63709 6 133851973 to 133851976 3 - TSS region transcription start site region 63709
Tssr63710 6 133851977 to 133851989 12 - TSS region transcription start site region 63710
Tssr63711 6 133852007 to 133852019 12 - TSS region transcription start site region 63711
Tssr63712 6 133852089 to 133852090 1 - TSS region transcription start site region 63712
D6Uwa8 6 133852549 to 133852756 207 DNA segment DNA segment, Chr 6, University of Western Australia 8
Skmw15 6 133852888 to 133853029 141 QTL skeletal muscle weight 15
D6Mit111 6 133852888 to 133853029 141 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 111
Tssr63713 6 133853650 to 133853673 23 - TSS region transcription start site region 63713
Gm43968 6 133864054 to 133864720 666 + pseudogene predicted gene, 43968
Tssr63714 6 133864993 to 133865005 12 - TSS region transcription start site region 63714
Gm8956 6 133931587 to 133932409 822 - pseudogene predicted gene 8956
D6Mit290 6 133986464 to 133986588 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 290
Gm46977 6 134018144 to 134035302 17158 - protein coding gene predicted gene, 46977
Tssr2033 6 134020860 to 134020869 9 - TSS region transcription start site region 2033
Tssr2034 6 134034086 to 134034103 17 + TSS region transcription start site region 2034