Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:130712960-132643886

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137 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bhr5 6 115717516 to 132601187 16883671 QTL bronchial hyperresponsiveness 5
Gm20997 6 130721388 to 130721618 230 - pseudogene predicted gene, 20997
Gm44527 6 130728161 to 130747623 19462 - pseudogene predicted gene 44527
D6Ott32 6 130771047 to 130771444 397 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 32
Gm18423 6 130776236 to 130777309 1073 + pseudogene predicted gene, 18423
Gm44525 6 130786622 to 130799987 13365 - pseudogene predicted gene 44525
Gm44118 6 130825832 to 130826060 228 + pseudogene predicted gene, 44118
Gm21940 6 130838105 to 130840382 2277 - pseudogene predicted gene, 21940
Gm33962 6 130868228 to 130888691 20463 - pseudogene predicted gene, 33962
Gm44128 6 130911171 to 130911389 218 - pseudogene predicted gene, 44128
Gm6608 6 130914982 to 130980516 65534 - pseudogene predicted gene 6608
Gm44988 6 130939248 to 130940408 1160 - pseudogene predicted gene 44988
Gm44828 6 130953357 to 130953462 105 - pseudogene predicted gene 44828
Gm44989 6 130980290 to 130980506 216 - pseudogene predicted gene 44989
Gm44133 6 130987148 to 131003919 16771 - pseudogene predicted gene, 44133
Gm44134 6 131038181 to 131052469 14288 - pseudogene predicted gene, 44134
Gm44149 6 131071820 to 131072045 225 + pseudogene predicted gene, 44149
Gm44150 6 131084231 to 131104337 20106 - pseudogene predicted gene, 44150
Gm8837 6 131130944 to 131132687 1743 + pseudogene predicted gene 8837
Gm5581 6 131166104 to 131182379 16275 - pseudogene predicted gene 5581
Klra2 6 131219223 to 131247362 28139 - protein coding gene killer cell lectin-like receptor, subfamily A, member 2
Tssr63671 6 131243956 to 131243966 10 - TSS region transcription start site region 63671
Tssr63672 6 131245249 to 131245283 34 - TSS region transcription start site region 63672
Tssr63673 6 131247342 to 131247367 25 - TSS region transcription start site region 63673
Gm5582 6 131253528 to 131254049 521 - pseudogene predicted gene 5582
Gm44182 6 131270429 to 131270543 114 - pseudogene predicted gene, 44182
Magohb 6 131284389 to 131293244 8855 - protein coding gene mago homolog B, exon junction complex core component
Gm44958 6 131291603 to 131292338 735 - pseudogene predicted gene 44958
Cpgi18064 6 131292872 to 131293441 569 CpG island CpG island 18064
Tssr63674 6 131293157 to 131293168 11 - TSS region transcription start site region 63674
Tssr63675 6 131293187 to 131293248 61 - TSS region transcription start site region 63675
Styk1 6 131299133 to 131317015 17882 - protein coding gene serine/threonine/tyrosine kinase 1
Tssr63676 6 131316046 to 131316049 3 - TSS region transcription start site region 63676
Tssr63677 6 131348366 to 131348377 11 - TSS region transcription start site region 63677
Tssr63678 6 131348379 to 131348392 13 - TSS region transcription start site region 63678
Tssr63679 6 131353534 to 131353555 21 - TSS region transcription start site region 63679
Tssr63680 6 131353557 to 131353610 53 - TSS region transcription start site region 63680
Ybx3 6 131364858 to 131388450 23592 - protein coding gene Y box protein 3
Tssr59195 6 131365283 to 131365333 50 + TSS region transcription start site region 59195
Tssr63681 6 131365347 to 131365374 27 - TSS region transcription start site region 63681
Tssr63682 6 131367820 to 131367864 44 - TSS region transcription start site region 63682
Tssr63683 6 131368099 to 131368110 11 - TSS region transcription start site region 63683
Tssr63684 6 131368423 to 131368436 13 - TSS region transcription start site region 63684
Tssr63685 6 131368468 to 131368499 31 - TSS region transcription start site region 63685
Tssr63686 6 131368508 to 131368524 16 - TSS region transcription start site region 63686
Tssr63687 6 131368542 to 131368567 25 - TSS region transcription start site region 63687
Tssr63688 6 131370365 to 131370380 15 - TSS region transcription start site region 63688
Cpgi18065 6 131375935 to 131376174 239 CpG island CpG island 18065
Tssr63689 6 131376035 to 131376055 20 - TSS region transcription start site region 63689
Tssr63690 6 131376087 to 131376103 16 - TSS region transcription start site region 63690
Tssr63691 6 131379420 to 131379442 22 - TSS region transcription start site region 63691
Gm22362 6 131380273 to 131380406 133 - snoRNA gene predicted gene, 22362
Tssr59196 6 131380870 to 131380888 18 + TSS region transcription start site region 59196
Tssr59197 6 131380907 to 131380919 12 + TSS region transcription start site region 59197
Tssr63692 6 131383764 to 131383809 45 - TSS region transcription start site region 63692
Tssr63693 6 131385840 to 131385843 3 - TSS region transcription start site region 63693
Cpgi18066 6 131387370 to 131388843 1473 CpG island CpG island 18066
Tssr63694 6 131388260 to 131388344 84 - TSS region transcription start site region 63694
Tssr63695 6 131388345 to 131388365 20 - TSS region transcription start site region 63695
Tssr63696 6 131388382 to 131388397 15 - TSS region transcription start site region 63696
Tssr63697 6 131388417 to 131388464 47 - TSS region transcription start site region 63697
Tssr63698 6 131388465 to 131388476 11 - TSS region transcription start site region 63698
Gm18688 6 131432070 to 131433865 1795 - pseudogene predicted gene, 18688
Cpgi18067 6 131433525 to 131434074 549 CpG island CpG island 18067
D6Ott113 6 131477422 to 131477706 284 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 113
Gm6619 6 131486422 to 131491435 5013 + protein coding gene predicted gene 6619
Gm22190 6 131532922 to 131533031 109 + miRNA gene predicted gene, 22190
5430401F13Rik 6 131543762 to 131553757 9995 + protein coding gene RIKEN cDNA 5430401F13 gene
Gm16571 6 131585110 to 131590261 5151 + pseudogene predicted gene 16571
Hmgb1l 6 131608301 to 131608871 570 - pseudogene high mobility group box 1-like
Gm43943 6 131613688 to 131613800 112 + pseudogene predicted gene, 43943
Tas2r130 6 131629892 to 131630830 938 - protein coding gene taste receptor, type 2, member 130
D6Ott115 6 131632272 to 131632447 175 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 115
Tas2r107 6 131659118 to 131660149 1031 - protein coding gene taste receptor, type 2, member 107
Tas2r106 6 131677960 to 131678886 926 - protein coding gene taste receptor, type 2, member 106
Tas2r104 6 131684836 to 131685744 908 - protein coding gene taste receptor, type 2, member 104
Tas2r105 6 131686561 to 131687463 902 - protein coding gene taste receptor, type 2, member 105
Tas2r114 6 131689134 to 131690063 929 - protein coding gene taste receptor, type 2, member 114
Tssr59198 6 131782168 to 131782176 8 + TSS region transcription start site region 59198
D6Wum20 6 131833191 to 131833319 128 DNA segment DNA segment, Chr 6, Washington University School of Medicine 20
Tssr59199 6 131837164 to 131837191 27 + TSS region transcription start site region 59199
Tssr59200 6 131837445 to 131837488 43 + TSS region transcription start site region 59200
Gm43973 6 131880668 to 131880877 209 + pseudogene predicted gene, 43973
D6Wum18 6 131937025 to 131937388 363 DNA segment DNA segment, Chr 6, Washington University School of Medicine 18
Gm43974 6 131940936 to 131941619 683 - lincRNA gene predicted gene, 43974
D6Wum16 6 131956012 to 131956298 286 DNA segment DNA segment, Chr 6, Washington University School of Medicine 16
Prb3-ps 6 132055403 to 132056513 1110 - pseudogene proline-rich protein BstNI subfamily 3, pseudogene
Gm43975 6 132069305 to 132069785 480 - pseudogene predicted gene, 43975
Gm4736 6 132114576 to 132117662 3086 - pseudogene predicted gene 4736
Gm43976 6 132135455 to 132135689 234 - pseudogene predicted gene, 43976
Gm43978 6 132140165 to 132140615 450 - pseudogene predicted gene, 43978
Gm18912 6 132163521 to 132229055 65534 - pseudogene predicted gene, 18912
Prb1 6 132206795 to 132210521 3726 - protein coding gene proline-rich protein BstNI subfamily 1
Gm44687 6 132228839 to 132229073 234 - pseudogene predicted gene 44687
Gm43979 6 132233522 to 132233996 474 - pseudogene predicted gene, 43979
D6Mit219a 6 132289569 to 132289756 187 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 219a
Shm5 6 132289569 to 145656013 13366444 QTL sperm head morphology 5
Prpmp5 6 132311590 to 132314743 3153 - protein coding gene proline-rich protein MP5
Tssr2031 6 132314751 to 132314757 6 - TSS region transcription start site region 2031
Gm44990 6 132333590 to 132333806 216 - pseudogene predicted gene 44990
Gm20951 6 132333608 to 132384045 50437 - pseudogene predicted gene, 20951
Gm44727 6 132338858 to 132339308 450 - pseudogene predicted gene 44727
Gm8882 6 132361105 to 132364134 3029 - protein coding gene predicted gene 8882
Tssr63699 6 132364129 to 132364135 6 - TSS region transcription start site region 63699
Gm44726 6 132383828 to 132384044 216 - pseudogene predicted gene 44726
Gm44003 6 132388886 to 132389375 489 - pseudogene predicted gene, 44003
D6Mit219b 6 132435189 to 132435375 186 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 219b
Gm5154 6 132438531 to 132441722 3191 - pseudogene predicted gene 5154
Tssr59201 6 132439539 to 132439542 3 + TSS region transcription start site region 59201
Tssr63700 6 132439714 to 132439718 4 - TSS region transcription start site region 63700
Tssr63701 6 132439741 to 132439769 28 - TSS region transcription start site region 63701
Tssr63702 6 132441745 to 132441752 7 - TSS region transcription start site region 63702
Gm45063 6 132462502 to 132462973 471 - pseudogene predicted gene 45063
Gm18326 6 132462521 to 132473772 11251 - pseudogene predicted gene, 18326
Gm44952 6 132473338 to 132473770 432 - pseudogene predicted gene 44952
Tssr59202 6 132507758 to 132507762 4 + TSS region transcription start site region 59202
Gm44070 6 132525033 to 132527252 2219 + unclassified gene predicted gene, 44070
n-R5s166 6 132564972 to 132565092 120 + rRNA gene nuclear encoded rRNA 5S 166
Tssr59203 6 132569804 to 132569809 5 + TSS region transcription start site region 59203
Rua 6 132569842 to 132572401 2559 QTL raffinose acetate tasting
Prh1 6 132569842 to 132572401 2559 + protein coding gene proline rich protein HaeIII subfamily 1
Qui 6 132569842 to 132572401 2559 QTL quinine sensitivity, taste
Cyx 6 132569842 to 132572401 2559 QTL cycloheximide tasting
Tssr59204 6 132572019 to 132572062 43 + TSS region transcription start site region 59204
Tssr59205 6 132572145 to 132572156 11 + TSS region transcription start site region 59205
Tssr63703 6 132572182 to 132572184 2 - TSS region transcription start site region 63703
D6Mit13.1a 6 132572631 to 132572762 131 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13.1a
n-R5s167 6 132591058 to 132591178 120 + rRNA gene nuclear encoded rRNA 5S 167
Tssr59206 6 132595909 to 132595913 4 + TSS region transcription start site region 59206
Prp2 6 132595946 to 132600702 4756 + protein coding gene proline rich protein 2
D6Mit13.1b 6 132600933 to 132601066 133 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13.1b
Etohcta6 6 132601042 to 132601187 145 QTL ethanol conditioned taste aversion 6
Mop1 6 132601042 to 146429238 13828196 QTL morphine preference 1
D6Mit13 6 132601042 to 132601187 145 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13
D6Mit13.2 6 132601162 to 132601273 111 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 13.2
A630073D07Rik 6 132625111 to 132627511 2400 - protein coding gene RIKEN cDNA A630073D07 gene
Tssr63704 6 132627512 to 132627516 4 - TSS region transcription start site region 63704