Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:129485804-130123936

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45969 6 129459780 to 129501701 41921 + lncRNA gene predicted gene, 45969
Olr1 6 129485244 to 129507165 21921 - protein coding gene oxidized low density lipoprotein (lectin-like) receptor 1
Tssr59171 6 129486588 to 129486602 14 + TSS region transcription start site region 59171
Tssr63648 6 129486962 to 129486976 14 - TSS region transcription start site region 63648
Tssr63649 6 129487002 to 129487012 10 - TSS region transcription start site region 63649
Tssr63650 6 129487786 to 129487796 10 - TSS region transcription start site region 63650
Tssr63651 6 129494408 to 129494422 14 - TSS region transcription start site region 63651
Tssr63652 6 129507156 to 129507171 15 - TSS region transcription start site region 63652
Tssr63653 6 129507177 to 129507181 4 - TSS region transcription start site region 63653
Tssr59172 6 129512538 to 129512562 24 + TSS region transcription start site region 59172
Tmem52b 6 129512555 to 129519227 6672 + protein coding gene transmembrane protein 52B
Tssr59173 6 129512579 to 129512644 65 + TSS region transcription start site region 59173
Tssr59174 6 129512650 to 129512675 25 + TSS region transcription start site region 59174
Tssr59175 6 129512733 to 129512745 12 + TSS region transcription start site region 59175
Tssr59176 6 129514452 to 129514456 4 + TSS region transcription start site region 59176
Tssr59177 6 129517525 to 129517539 14 + TSS region transcription start site region 59177
Gm44120 6 129522562 to 129525584 3022 + unclassified gene predicted gene, 44120
1700101I11Rik 6 129532184 to 129533284 1100 - lncRNA gene RIKEN cDNA 1700101I11 gene
Cpgi18063 6 129533121 to 129533914 793 CpG island CpG island 18063
Tssr59178 6 129533154 to 129533181 27 + TSS region transcription start site region 59178
Tssr59179 6 129533183 to 129533205 22 + TSS region transcription start site region 59179
Gabarapl1 6 129533192 to 129542331 9139 + protein coding gene gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
Tssr59180 6 129533208 to 129533249 41 + TSS region transcription start site region 59180
Tssr59181 6 129533251 to 129533268 17 + TSS region transcription start site region 59181
Tssr63654 6 129533267 to 129533275 8 - TSS region transcription start site region 63654
Tssr63655 6 129533278 to 129533289 11 - TSS region transcription start site region 63655
Tssr59182 6 129533368 to 129533401 33 + TSS region transcription start site region 59182
Tssr63656 6 129533654 to 129533659 5 - TSS region transcription start site region 63656
Gm44243 6 129540221 to 129540912 691 + unclassified gene predicted gene, 44243
Tssr59183 6 129542159 to 129542207 48 + TSS region transcription start site region 59183
Tssr59184 6 129545397 to 129545423 26 + TSS region transcription start site region 59184
Gm44251 6 129552007 to 129552448 441 - pseudogene predicted gene, 44251
D6Wum2 6 129577426 to 129577706 280 DNA segment DNA segment, Chr 6, Washington University School of Medicine 2
Klre1 6 129577905 to 129585827 7922 + protein coding gene killer cell lectin-like receptor family E member 1
Tssr59185 6 129578208 to 129578217 9 + TSS region transcription start site region 59185
Tssr59186 6 129582167 to 129582182 15 + TSS region transcription start site region 59186
Tssr59187 6 129588057 to 129588067 10 + TSS region transcription start site region 59187
Tssr59188 6 129588074 to 129588083 9 + TSS region transcription start site region 59188
Tssr59189 6 129588091 to 129588098 7 + TSS region transcription start site region 59189
Tssr59190 6 129588118 to 129588126 8 + TSS region transcription start site region 59190
Tssr59191 6 129588363 to 129588393 30 + TSS region transcription start site region 59191
Tssr59192 6 129591713 to 129591723 10 + TSS region transcription start site region 59192
Tssr59193 6 129591755 to 129591767 12 + TSS region transcription start site region 59193
Klrd1 6 129591782 to 129598775 6993 + protein coding gene killer cell lectin-like receptor, subfamily D, member 1
Tssr59194 6 129591785 to 129591817 32 + TSS region transcription start site region 59194
Klrk1 6 129610323 to 129623864 13541 - protein coding gene killer cell lectin-like receptor subfamily K, member 1
Tssr63657 6 129615831 to 129615861 30 - TSS region transcription start site region 63657
Tssr63658 6 129622602 to 129622613 11 - TSS region transcription start site region 63658
Tssr63659 6 129622685 to 129622711 26 - TSS region transcription start site region 63659
Tssr63660 6 129623840 to 129623866 26 - TSS region transcription start site region 63660
Tssr63661 6 129623898 to 129623907 9 - TSS region transcription start site region 63661
Tssr63662 6 129623971 to 129623978 7 - TSS region transcription start site region 63662
Klrc3 6 129639064 to 129643337 4273 - protein coding gene killer cell lectin-like receptor subfamily C, member 3
Klrc2 6 129649602 to 129660737 11135 - protein coding gene killer cell lectin-like receptor subfamily C, member 2
Klrc1 6 129666015 to 129678973 12958 - protein coding gene killer cell lectin-like receptor subfamily C, member 1
Tssr63663 6 129678809 to 129678820 11 - TSS region transcription start site region 63663
Tssr63664 6 129678844 to 129678853 9 - TSS region transcription start site region 63664
Tssr63665 6 129678908 to 129678933 25 - TSS region transcription start site region 63665
Gm7309 6 129689618 to 129690198 580 - pseudogene predicted gene 7309
Mir680-1 6 129691535 to 129691643 108 + miRNA gene microRNA 680-1
Gm44135 6 129696118 to 129696485 367 - unclassified gene predicted gene, 44135
Klri1 6 129697218 to 129717132 19914 - protein coding gene killer cell lectin-like receptor family I member 1
Klri2 6 129729041 to 129740484 11443 - protein coding gene killer cell lectin-like receptor family I member 2
Tssr63666 6 129740468 to 129740500 32 - TSS region transcription start site region 63666
Gm156 6 129766568 to 129784270 17702 - protein coding gene predicted gene 156
Gm16242 6 129795804 to 129813936 18132 - pseudogene predicted gene 16242
D6Ott8 6 129829193 to 129829418 225 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 8
Klra17 6 129831154 to 129876672 45518 - protein coding gene killer cell lectin-like receptor, subfamily A, member 17
Gm44248 6 129848693 to 129850241 1548 + pseudogene predicted gene, 44248
Gm17631 6 129862649 to 129864393 1744 + protein coding gene predicted gene, 17631
Tssr63667 6 129876659 to 129876677 18 - TSS region transcription start site region 63667
Gm23977 6 129897932 to 129898005 73 + snRNA gene predicted gene, 23977
Klra5 6 129898988 to 129913224 14236 - protein coding gene killer cell lectin-like receptor, subfamily A, member 5
Gm40404 6 129945741 to 129963751 18010 - lncRNA gene predicted gene, 40404
Gm15854 6 129972380 to 129992844 20464 - pseudogene predicted gene 15854
D6Wum4 6 130006926 to 130007194 268 DNA segment DNA segment, Chr 6, Washington University School of Medicine 4
Gm22555 6 130011837 to 130011898 61 + snRNA gene predicted gene, 22555
Klra6 6 130013033 to 130026954 13921 - protein coding gene killer cell lectin-like receptor, subfamily A, member 6
D6Uwa4 6 130029730 to 130029892 162 DNA segment DNA segment, Chr 6, University of Western Australia 4
Klra4 6 130043731 to 130067271 23540 - protein coding gene killer cell lectin-like receptor, subfamily A, member 4
Tssr63668 6 130065242 to 130065260 18 - TSS region transcription start site region 63668
Gm24676 6 130081419 to 130081493 74 + snRNA gene predicted gene, 24676
Klra11-ps 6 130082897 to 130094676 11779 - pseudogene killer cell lectin-like receptor subfamily A, member 11, pseudogene
Gm43988 6 130083660 to 130083771 111 + pseudogene predicted gene, 43988
Gm22621 6 130113291 to 130113364 73 + snRNA gene predicted gene, 22621
Klra8 6 130115226 to 130129898 14672 - protein coding gene killer cell lectin-like receptor, subfamily A, member 8