Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:129472733-129552745

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm45969 6 129459780 to 129501701 41921 + lncRNA gene predicted gene, 45969
Clec7a 6 129461591 to 129472779 11188 - polymorphic pseudogene C-type lectin domain family 7, member a
Tssr63647 6 129472775 to 129472792 17 - TSS region transcription start site region 63647
Olr1 6 129485244 to 129507165 21921 - protein coding gene oxidized low density lipoprotein (lectin-like) receptor 1
Tssr59171 6 129486588 to 129486602 14 + TSS region transcription start site region 59171
Tssr63648 6 129486962 to 129486976 14 - TSS region transcription start site region 63648
Tssr63649 6 129487002 to 129487012 10 - TSS region transcription start site region 63649
Tssr63650 6 129487786 to 129487796 10 - TSS region transcription start site region 63650
Tssr63651 6 129494408 to 129494422 14 - TSS region transcription start site region 63651
Tssr63652 6 129507156 to 129507171 15 - TSS region transcription start site region 63652
Tssr63653 6 129507177 to 129507181 4 - TSS region transcription start site region 63653
Tssr59172 6 129512538 to 129512562 24 + TSS region transcription start site region 59172
Tmem52b 6 129512555 to 129519227 6672 + protein coding gene transmembrane protein 52B
Tssr59173 6 129512579 to 129512644 65 + TSS region transcription start site region 59173
Tssr59174 6 129512650 to 129512675 25 + TSS region transcription start site region 59174
Tssr59175 6 129512733 to 129512745 12 + TSS region transcription start site region 59175
Tssr59176 6 129514452 to 129514456 4 + TSS region transcription start site region 59176
Tssr59177 6 129517525 to 129517539 14 + TSS region transcription start site region 59177
Gm44120 6 129522562 to 129525584 3022 + unclassified gene predicted gene, 44120
1700101I11Rik 6 129532184 to 129533284 1100 - lncRNA gene RIKEN cDNA 1700101I11 gene
Cpgi18063 6 129533121 to 129533914 793 CpG island CpG island 18063
Tssr59178 6 129533154 to 129533181 27 + TSS region transcription start site region 59178
Tssr59179 6 129533183 to 129533205 22 + TSS region transcription start site region 59179
Gabarapl1 6 129533192 to 129542331 9139 + protein coding gene gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
Tssr59180 6 129533208 to 129533249 41 + TSS region transcription start site region 59180
Tssr59181 6 129533251 to 129533268 17 + TSS region transcription start site region 59181
Tssr63654 6 129533267 to 129533275 8 - TSS region transcription start site region 63654
Tssr63655 6 129533278 to 129533289 11 - TSS region transcription start site region 63655
Tssr59182 6 129533368 to 129533401 33 + TSS region transcription start site region 59182
Tssr63656 6 129533654 to 129533659 5 - TSS region transcription start site region 63656
Gm44243 6 129540221 to 129540912 691 + unclassified gene predicted gene, 44243
Tssr59183 6 129542159 to 129542207 48 + TSS region transcription start site region 59183
Tssr59184 6 129545397 to 129545423 26 + TSS region transcription start site region 59184
Gm44251 6 129552007 to 129552448 441 - pseudogene predicted gene, 44251