Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:129299064-129983337

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172 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4922502D21Rik 6 129322164 to 129331796 9632 - protein coding gene RIKEN cDNA 4922502D21 gene
Tssr63593 6 129326706 to 129326725 19 - TSS region transcription start site region 63593
Tssr63594 6 129331738 to 129331779 41 - TSS region transcription start site region 63594
Tssr63595 6 129331786 to 129331791 5 - TSS region transcription start site region 63595
Tssr63596 6 129331805 to 129331807 2 - TSS region transcription start site region 63596
Tssr59139 6 129349738 to 129349750 12 + TSS region transcription start site region 59139
Clec12a 6 129349785 to 129365303 15518 + protein coding gene C-type lectin domain family 12, member a
Tssr59140 6 129350203 to 129350210 7 + TSS region transcription start site region 59140
Tssr59141 6 129350222 to 129350231 9 + TSS region transcription start site region 59141
Tssr59142 6 129350237 to 129350249 12 + TSS region transcription start site region 59142
Tssr59143 6 129350259 to 129350270 11 + TSS region transcription start site region 59143
Tssr59144 6 129350282 to 129350297 15 + TSS region transcription start site region 59144
Tssr59145 6 129350309 to 129350331 22 + TSS region transcription start site region 59145
Tssr59146 6 129350333 to 129350338 5 + TSS region transcription start site region 59146
Tssr59147 6 129350348 to 129350374 26 + TSS region transcription start site region 59147
Tssr59148 6 129350377 to 129350391 14 + TSS region transcription start site region 59148
Tssr59149 6 129350454 to 129350463 9 + TSS region transcription start site region 59149
Tssr2029 6 129350479 to 129350491 12 + TSS region transcription start site region 2029
Tssr59150 6 129351423 to 129351437 14 + TSS region transcription start site region 59150
Tssr59151 6 129351452 to 129351481 29 + TSS region transcription start site region 59151
Tssr59152 6 129352711 to 129352728 17 + TSS region transcription start site region 59152
Tssr59153 6 129353431 to 129353454 23 + TSS region transcription start site region 59153
Tssr59154 6 129359759 to 129359766 7 + TSS region transcription start site region 59154
Tssr59155 6 129361883 to 129361890 7 + TSS region transcription start site region 59155
Tssr59156 6 129366547 to 129366558 11 + TSS region transcription start site region 59156
Clec12b 6 129375515 to 129385874 10359 - protein coding gene C-type lectin domain family 12, member B
Tssr59157 6 129377426 to 129377431 5 + TSS region transcription start site region 59157
Tssr59158 6 129377460 to 129377465 5 + TSS region transcription start site region 59158
Tssr2030 6 129385469 to 129385472 3 - TSS region transcription start site region 2030
Tssr63597 6 129385475 to 129385486 11 - TSS region transcription start site region 63597
Tssr63598 6 129385497 to 129385510 13 - TSS region transcription start site region 63598
Tssr63599 6 129386052 to 129386062 10 - TSS region transcription start site region 63599
Clec1b 6 129397297 to 129405413 8116 + protein coding gene C-type lectin domain family 1, member b
Tssr59159 6 129397308 to 129397332 24 + TSS region transcription start site region 59159
Tssr59160 6 129397478 to 129397498 20 + TSS region transcription start site region 59160
Tssr59161 6 129403601 to 129403616 15 + TSS region transcription start site region 59161
Tssr59162 6 129408854 to 129408876 22 + TSS region transcription start site region 59162
Clec9a 6 129408862 to 129424763 15901 + protein coding gene C-type lectin domain family 9, member a
Tssr59163 6 129408896 to 129408912 16 + TSS region transcription start site region 59163
Tssr59164 6 129408916 to 129408927 11 + TSS region transcription start site region 59164
Tssr59165 6 129408930 to 129408937 7 + TSS region transcription start site region 59165
Tssr59166 6 129416743 to 129416768 25 + TSS region transcription start site region 59166
Gm43914 6 129418179 to 129418772 593 + sense intronic lncRNA gene predicted gene, 43914
Tssr63600 6 129421145 to 129421149 4 - TSS region transcription start site region 63600
Clec1a 6 129426684 to 129452000 25316 - protein coding gene C-type lectin domain family 1, member a
Tssr63601 6 129428549 to 129428555 6 - TSS region transcription start site region 63601
Tssr63602 6 129451739 to 129451752 13 - TSS region transcription start site region 63602
Tssr63603 6 129451783 to 129451864 81 - TSS region transcription start site region 63603
Tssr63604 6 129451873 to 129451884 11 - TSS region transcription start site region 63604
Tssr63605 6 129451906 to 129451917 11 - TSS region transcription start site region 63605
Gm45969 6 129459780 to 129501701 41921 + lncRNA gene predicted gene, 45969
Clec7a 6 129461591 to 129472779 11188 - polymorphic pseudogene C-type lectin domain family 7, member a
Tssr63606 6 129462427 to 129462444 17 - TSS region transcription start site region 63606
Tssr63607 6 129462445 to 129462458 13 - TSS region transcription start site region 63607
Tssr63608 6 129462607 to 129462616 9 - TSS region transcription start site region 63608
Tssr63609 6 129462635 to 129462652 17 - TSS region transcription start site region 63609
Tssr63610 6 129462654 to 129462674 20 - TSS region transcription start site region 63610
Tssr59167 6 129462657 to 129462677 20 + TSS region transcription start site region 59167
Tssr63611 6 129462679 to 129462686 7 - TSS region transcription start site region 63611
Tssr63612 6 129462728 to 129462737 9 - TSS region transcription start site region 63612
Tssr63613 6 129462761 to 129462777 16 - TSS region transcription start site region 63613
Tssr63614 6 129462785 to 129462795 10 - TSS region transcription start site region 63614
Tssr63615 6 129462802 to 129462814 12 - TSS region transcription start site region 63615
Tssr63616 6 129462830 to 129462847 17 - TSS region transcription start site region 63616
Tssr59168 6 129462865 to 129462883 18 + TSS region transcription start site region 59168
Tssr63617 6 129462883 to 129462894 11 - TSS region transcription start site region 63617
Tssr63618 6 129462955 to 129463002 47 - TSS region transcription start site region 63618
Tssr63619 6 129463086 to 129463117 31 - TSS region transcription start site region 63619
Tssr63620 6 129463121 to 129463145 24 - TSS region transcription start site region 63620
Tssr63621 6 129463153 to 129463165 12 - TSS region transcription start site region 63621
Tssr63622 6 129464425 to 129464434 9 - TSS region transcription start site region 63622
Tssr63623 6 129464462 to 129464473 11 - TSS region transcription start site region 63623
Tssr63624 6 129464502 to 129464513 11 - TSS region transcription start site region 63624
Tssr63625 6 129464619 to 129464647 28 - TSS region transcription start site region 63625
Tssr63626 6 129464877 to 129464884 7 - TSS region transcription start site region 63626
Tssr63627 6 129465061 to 129465072 11 - TSS region transcription start site region 63627
Tssr63628 6 129465149 to 129465158 9 - TSS region transcription start site region 63628
Tssr63629 6 129465182 to 129465195 13 - TSS region transcription start site region 63629
Tssr63630 6 129465470 to 129465487 17 - TSS region transcription start site region 63630
Tssr63631 6 129465488 to 129465504 16 - TSS region transcription start site region 63631
Tssr63632 6 129465508 to 129465531 23 - TSS region transcription start site region 63632
Tssr63633 6 129465533 to 129465540 7 - TSS region transcription start site region 63633
Tssr63634 6 129465551 to 129465564 13 - TSS region transcription start site region 63634
Tssr63635 6 129465565 to 129465574 9 - TSS region transcription start site region 63635
Tssr63636 6 129467545 to 129467564 19 - TSS region transcription start site region 63636
Tssr63637 6 129467565 to 129467586 21 - TSS region transcription start site region 63637
Tssr63638 6 129467589 to 129467599 10 - TSS region transcription start site region 63638
Tssr63639 6 129467611 to 129467644 33 - TSS region transcription start site region 63639
Tssr63640 6 129467651 to 129467669 18 - TSS region transcription start site region 63640
Tssr63641 6 129468895 to 129468909 14 - TSS region transcription start site region 63641
Tssr63642 6 129468957 to 129468972 15 - TSS region transcription start site region 63642
Tssr63643 6 129470815 to 129470821 6 - TSS region transcription start site region 63643
Tssr63644 6 129470943 to 129470960 17 - TSS region transcription start site region 63644
Tssr63645 6 129470980 to 129470997 17 - TSS region transcription start site region 63645
Tssr63646 6 129471472 to 129471504 32 - TSS region transcription start site region 63646
Tssr59169 6 129471637 to 129471664 27 + TSS region transcription start site region 59169
Tssr59170 6 129471686 to 129471694 8 + TSS region transcription start site region 59170
Tssr63647 6 129472775 to 129472792 17 - TSS region transcription start site region 63647
Olr1 6 129485244 to 129507165 21921 - protein coding gene oxidized low density lipoprotein (lectin-like) receptor 1
Tssr59171 6 129486588 to 129486602 14 + TSS region transcription start site region 59171
Tssr63648 6 129486962 to 129486976 14 - TSS region transcription start site region 63648
Tssr63649 6 129487002 to 129487012 10 - TSS region transcription start site region 63649
Tssr63650 6 129487786 to 129487796 10 - TSS region transcription start site region 63650
Tssr63651 6 129494408 to 129494422 14 - TSS region transcription start site region 63651
Tssr63652 6 129507156 to 129507171 15 - TSS region transcription start site region 63652
Tssr63653 6 129507177 to 129507181 4 - TSS region transcription start site region 63653
Tssr59172 6 129512538 to 129512562 24 + TSS region transcription start site region 59172
Tmem52b 6 129512555 to 129519227 6672 + protein coding gene transmembrane protein 52B
Tssr59173 6 129512579 to 129512644 65 + TSS region transcription start site region 59173
Tssr59174 6 129512650 to 129512675 25 + TSS region transcription start site region 59174
Tssr59175 6 129512733 to 129512745 12 + TSS region transcription start site region 59175
Tssr59176 6 129514452 to 129514456 4 + TSS region transcription start site region 59176
Tssr59177 6 129517525 to 129517539 14 + TSS region transcription start site region 59177
Gm44120 6 129522562 to 129525584 3022 + unclassified gene predicted gene, 44120
1700101I11Rik 6 129532184 to 129533284 1100 - lncRNA gene RIKEN cDNA 1700101I11 gene
Cpgi18063 6 129533121 to 129533914 793 CpG island CpG island 18063
Tssr59178 6 129533154 to 129533181 27 + TSS region transcription start site region 59178
Tssr59179 6 129533183 to 129533205 22 + TSS region transcription start site region 59179
Gabarapl1 6 129533192 to 129542331 9139 + protein coding gene gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
Tssr59180 6 129533208 to 129533249 41 + TSS region transcription start site region 59180
Tssr59181 6 129533251 to 129533268 17 + TSS region transcription start site region 59181
Tssr63654 6 129533267 to 129533275 8 - TSS region transcription start site region 63654
Tssr63655 6 129533278 to 129533289 11 - TSS region transcription start site region 63655
Tssr59182 6 129533368 to 129533401 33 + TSS region transcription start site region 59182
Tssr63656 6 129533654 to 129533659 5 - TSS region transcription start site region 63656
Gm44243 6 129540221 to 129540912 691 + unclassified gene predicted gene, 44243
Tssr59183 6 129542159 to 129542207 48 + TSS region transcription start site region 59183
Tssr59184 6 129545397 to 129545423 26 + TSS region transcription start site region 59184
Gm44251 6 129552007 to 129552448 441 - pseudogene predicted gene, 44251
D6Wum2 6 129577426 to 129577706 280 DNA segment DNA segment, Chr 6, Washington University School of Medicine 2
Klre1 6 129577905 to 129585827 7922 + protein coding gene killer cell lectin-like receptor family E member 1
Tssr59185 6 129578208 to 129578217 9 + TSS region transcription start site region 59185
Tssr59186 6 129582167 to 129582182 15 + TSS region transcription start site region 59186
Tssr59187 6 129588057 to 129588067 10 + TSS region transcription start site region 59187
Tssr59188 6 129588074 to 129588083 9 + TSS region transcription start site region 59188
Tssr59189 6 129588091 to 129588098 7 + TSS region transcription start site region 59189
Tssr59190 6 129588118 to 129588126 8 + TSS region transcription start site region 59190
Tssr59191 6 129588363 to 129588393 30 + TSS region transcription start site region 59191
Tssr59192 6 129591713 to 129591723 10 + TSS region transcription start site region 59192
Tssr59193 6 129591755 to 129591767 12 + TSS region transcription start site region 59193
Klrd1 6 129591782 to 129598775 6993 + protein coding gene killer cell lectin-like receptor, subfamily D, member 1
Tssr59194 6 129591785 to 129591817 32 + TSS region transcription start site region 59194
Klrk1 6 129610323 to 129623864 13541 - protein coding gene killer cell lectin-like receptor subfamily K, member 1
Tssr63657 6 129615831 to 129615861 30 - TSS region transcription start site region 63657
Tssr63658 6 129622602 to 129622613 11 - TSS region transcription start site region 63658
Tssr63659 6 129622685 to 129622711 26 - TSS region transcription start site region 63659
Tssr63660 6 129623840 to 129623866 26 - TSS region transcription start site region 63660
Tssr63661 6 129623898 to 129623907 9 - TSS region transcription start site region 63661
Tssr63662 6 129623971 to 129623978 7 - TSS region transcription start site region 63662
Klrc3 6 129639064 to 129643337 4273 - protein coding gene killer cell lectin-like receptor subfamily C, member 3
Klrc2 6 129649602 to 129660737 11135 - protein coding gene killer cell lectin-like receptor subfamily C, member 2
Klrc1 6 129666015 to 129678973 12958 - protein coding gene killer cell lectin-like receptor subfamily C, member 1
Tssr63663 6 129678809 to 129678820 11 - TSS region transcription start site region 63663
Tssr63664 6 129678844 to 129678853 9 - TSS region transcription start site region 63664
Tssr63665 6 129678908 to 129678933 25 - TSS region transcription start site region 63665
Gm7309 6 129689618 to 129690198 580 - pseudogene predicted gene 7309
Mir680-1 6 129691535 to 129691643 108 + miRNA gene microRNA 680-1
Gm44135 6 129696118 to 129696485 367 - unclassified gene predicted gene, 44135
Klri1 6 129697218 to 129717132 19914 - protein coding gene killer cell lectin-like receptor family I member 1
Klri2 6 129729041 to 129740484 11443 - protein coding gene killer cell lectin-like receptor family I member 2
Tssr63666 6 129740468 to 129740500 32 - TSS region transcription start site region 63666
Gm156 6 129766568 to 129784270 17702 - protein coding gene predicted gene 156
Gm16242 6 129795804 to 129813936 18132 - pseudogene predicted gene 16242
D6Ott8 6 129829193 to 129829418 225 DNA segment DNA segment, Chr 6, Animal Research Centre, Ottawa 8
Klra17 6 129831154 to 129876672 45518 - protein coding gene killer cell lectin-like receptor, subfamily A, member 17
Gm44248 6 129848693 to 129850241 1548 + pseudogene predicted gene, 44248
Gm17631 6 129862649 to 129864393 1744 + protein coding gene predicted gene, 17631
Tssr63667 6 129876659 to 129876677 18 - TSS region transcription start site region 63667
Gm23977 6 129897932 to 129898005 73 + snRNA gene predicted gene, 23977
Klra5 6 129898988 to 129913224 14236 - protein coding gene killer cell lectin-like receptor, subfamily A, member 5
Gm40404 6 129945741 to 129963751 18010 - lncRNA gene predicted gene, 40404
Gm15854 6 129972380 to 129992844 20464 - pseudogene predicted gene 15854