Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:128891672-129181682

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Clec2i 6 128887588 to 128898167 10579 + protein coding gene C-type lectin domain family 2, member i
Gm38905 6 128914114 to 128920059 5945 + lncRNA gene predicted gene, 38905
Tssr59078 6 128914258 to 128914273 15 + TSS region transcription start site region 59078
Gm44223 6 128919867 to 128919980 113 + pseudogene predicted gene, 44223
Gm27336 6 128931793 to 128931848 55 - miRNA gene predicted gene, 27336
Tssr63520 6 128933655 to 128933668 13 - TSS region transcription start site region 63520
Tssr63521 6 128934305 to 128934347 42 - TSS region transcription start site region 63521
Tssr59079 6 128934373 to 128934387 14 + TSS region transcription start site region 59079
Clec2g 6 128934381 to 128984707 50326 + protein coding gene C-type lectin domain family 2, member g
Tssr63522 6 128945530 to 128945552 22 - TSS region transcription start site region 63522
Tssr63523 6 128945853 to 128945859 6 - TSS region transcription start site region 63523
Gm15987 6 128952353 to 128975029 22676 - antisense lncRNA gene predicted gene 15987
Tssr63524 6 128954158 to 128954164 6 - TSS region transcription start site region 63524
Tssr59080 6 128960597 to 128960600 3 + TSS region transcription start site region 59080
Tssr63525 6 128961084 to 128961086 2 - TSS region transcription start site region 63525
Tssr63526 6 128966921 to 128966932 11 - TSS region transcription start site region 63526
Tssr63527 6 128970288 to 128970306 18 - TSS region transcription start site region 63527
Tssr63528 6 128970329 to 128970343 14 - TSS region transcription start site region 63528
Tssr63529 6 128970474 to 128970480 6 - TSS region transcription start site region 63529
Mir7649 6 128974840 to 128974895 55 - miRNA gene microRNA 7649
Tssr63530 6 128974898 to 128974919 21 - TSS region transcription start site region 63530
Tssr63531 6 128974976 to 128975014 38 - TSS region transcription start site region 63531
Tssr63532 6 128975019 to 128975048 29 - TSS region transcription start site region 63532
Gm8778 6 128976869 to 128977972 1103 - pseudogene predicted gene 8778
Tssr59081 6 128992937 to 128992952 15 + TSS region transcription start site region 59081
BC064078 6 128992961 to 129006647 13686 + pseudogene cDNA sequence BC064078
Tssr59082 6 128992971 to 128993054 83 + TSS region transcription start site region 59082
Tssr59083 6 128993071 to 128993080 9 + TSS region transcription start site region 59083
Tssr63533 6 128996406 to 128996409 3 - TSS region transcription start site region 63533
Tssr59084 6 129008789 to 129008800 11 + TSS region transcription start site region 59084
Tssr59085 6 129014106 to 129014114 8 + TSS region transcription start site region 59085
Clec2f 6 129014112 to 129020527 6415 + protein coding gene C-type lectin domain family 2, member f
Gm16186 6 129030837 to 129031676 839 - pseudogene predicted gene 16186
Tssr59086 6 129036521 to 129036526 5 + TSS region transcription start site region 59086
Tssr59087 6 129036593 to 129036607 14 + TSS region transcription start site region 59087
Tssr2027 6 129036619 to 129036648 29 + TSS region transcription start site region 2027
Tssr59088 6 129036672 to 129036682 10 + TSS region transcription start site region 59088
Tssr59089 6 129036707 to 129036722 15 + TSS region transcription start site region 59089
Tssr59090 6 129036743 to 129036753 10 + TSS region transcription start site region 59090
Tssr63534 6 129038543 to 129038553 10 - TSS region transcription start site region 63534
Tssr59091 6 129045821 to 129045830 9 + TSS region transcription start site region 59091
Tssr59092 6 129045893 to 129045906 13 + TSS region transcription start site region 59092
Klrb1f 6 129045901 to 129057464 11563 + protein coding gene killer cell lectin-like receptor subfamily B member 1F
Tssr59093 6 129045910 to 129045932 22 + TSS region transcription start site region 59093
Tssr59094 6 129045937 to 129045938 1 + TSS region transcription start site region 59094
Gm43992 6 129046845 to 129047041 196 - unclassified gene predicted gene, 43992
Gm44000 6 129047277 to 129049835 2558 - antisense lncRNA gene predicted gene, 44000
Tssr63535 6 129047460 to 129047480 20 - TSS region transcription start site region 63535
Tssr63536 6 129049208 to 129049219 11 - TSS region transcription start site region 63536
Tssr63537 6 129049830 to 129049851 21 - TSS region transcription start site region 63537
Tssr59095 6 129057207 to 129057256 49 + TSS region transcription start site region 59095
Clec2e 6 129091998 to 129100913 8915 - protein coding gene C-type lectin domain family 2, member e
Tssr63538 6 129093351 to 129093355 4 - TSS region transcription start site region 63538
Tssr63539 6 129097260 to 129097272 12 - TSS region transcription start site region 63539
Tssr63540 6 129097329 to 129097338 9 - TSS region transcription start site region 63540
Tssr63541 6 129097495 to 129097506 11 - TSS region transcription start site region 63541
Tssr63542 6 129097701 to 129097714 13 - TSS region transcription start site region 63542
Tssr63543 6 129100904 to 129100925 21 - TSS region transcription start site region 63543
Tssr63544 6 129100938 to 129100947 9 - TSS region transcription start site region 63544
Klrb1-ps1 6 129116518 to 129129446 12928 + pseudogene killer cell lectin-like receptor subfamily B member 1, pseudogene 1
Tssr63545 6 129160207 to 129160215 8 - TSS region transcription start site region 63545
Gm26160 6 129174820 to 129174882 62 + snRNA gene predicted gene, 26160
Tssr59096 6 129180613 to 129180630 17 + TSS region transcription start site region 59096
Clec2d 6 129180615 to 129186534 5919 + protein coding gene C-type lectin domain family 2, member d
Tssr59097 6 129180639 to 129180656 17 + TSS region transcription start site region 59097
Tssr59098 6 129180917 to 129180939 22 + TSS region transcription start site region 59098
Tssr59099 6 129180951 to 129180968 17 + TSS region transcription start site region 59099
Tssr59100 6 129180975 to 129181013 38 + TSS region transcription start site region 59100
Tssr59101 6 129181268 to 129181307 39 + TSS region transcription start site region 59101
Tssr59102 6 129181343 to 129181361 18 + TSS region transcription start site region 59102