Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:128759112-129275527

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192 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18056 6 128760196 to 128761030 834 CpG island CpG island 18056
Cpgi18057 6 128763930 to 128764553 623 CpG island CpG island 18057
Klrb1c 6 128778485 to 128788641 10156 - protein coding gene killer cell lectin-like receptor subfamily B member 1C
Gm44511 6 128780285 to 128826315 46030 - protein coding gene predicted gene 44511
Tssr63509 6 128788497 to 128788534 37 - TSS region transcription start site region 63509
Tssr63510 6 128788538 to 128788559 21 - TSS region transcription start site region 63510
Tssr63511 6 128788566 to 128788574 8 - TSS region transcription start site region 63511
Tssr63512 6 128788598 to 128788614 16 - TSS region transcription start site region 63512
Gm34755 6 128798913 to 128805831 6918 + lncRNA gene predicted gene, 34755
Cpgi18058 6 128798986 to 128800007 1021 CpG island CpG island 18058
Cpgi18059 6 128802901 to 128803393 492 CpG island CpG island 18059
Tssr63513 6 128803106 to 128803110 4 - TSS region transcription start site region 63513
Klrb1b 6 128813706 to 128826331 12625 - protein coding gene killer cell lectin-like receptor subfamily B member 1B
Tssr63514 6 128826277 to 128826330 53 - TSS region transcription start site region 63514
D6Mit338.1 6 128834803 to 128834916 113 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 338.1
Cmv3 6 128834894 to 137439929 8605035 QTL cytomegalovirus resistance 3
D6Mit135 6 128834894 to 128835032 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 135
D6Mit338 6 128834931 to 128835048 117 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 338
Fl1n 6 128835032 to 45314059 -83520973 QTL fatty liver 1 in NSY
Cpgi18060 6 128838355 to 128839484 1129 CpG island CpG island 18060
Tssr59076 6 128838448 to 128838452 4 + TSS region transcription start site region 59076
Tssr63515 6 128839623 to 128839648 25 - TSS region transcription start site region 63515
D6Mit289 6 128839901 to 128840035 134 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 289
Cpgi18061 6 128842538 to 128843865 1327 CpG island CpG island 18061
Gm44066 6 128842558 to 128843171 613 - lincRNA gene predicted gene, 44066
Gm44067 6 128843786 to 128846959 3173 - lincRNA gene predicted gene, 44067
Gm26656 6 128843786 to 128846959 3173 + lincRNA gene predicted gene, 26656
BC035044 6 128849090 to 128891126 42036 - protein coding gene cDNA sequence BC035044
Gm34849 6 128857033 to 128860097 3064 + lncRNA gene predicted gene, 34849
Gm44078 6 128862549 to 128865194 2645 - unclassified gene predicted gene, 44078
Gm8774 6 128883852 to 128884540 688 + pseudogene predicted gene 8774
Tssr59077 6 128887586 to 128887592 6 + TSS region transcription start site region 59077
Clec2i 6 128887588 to 128898167 10579 + protein coding gene C-type lectin domain family 2, member i
Tssr63516 6 128890959 to 128890962 3 - TSS region transcription start site region 63516
Tssr63517 6 128890992 to 128891001 9 - TSS region transcription start site region 63517
Tssr63518 6 128891049 to 128891101 52 - TSS region transcription start site region 63518
Tssr63519 6 128891105 to 128891178 73 - TSS region transcription start site region 63519
Gm38905 6 128914114 to 128920059 5945 + lncRNA gene predicted gene, 38905
Tssr59078 6 128914258 to 128914273 15 + TSS region transcription start site region 59078
Gm44223 6 128919867 to 128919980 113 + pseudogene predicted gene, 44223
Gm27336 6 128931793 to 128931848 55 - miRNA gene predicted gene, 27336
Tssr63520 6 128933655 to 128933668 13 - TSS region transcription start site region 63520
Tssr63521 6 128934305 to 128934347 42 - TSS region transcription start site region 63521
Tssr59079 6 128934373 to 128934387 14 + TSS region transcription start site region 59079
Clec2g 6 128934381 to 128984707 50326 + protein coding gene C-type lectin domain family 2, member g
Tssr63522 6 128945530 to 128945552 22 - TSS region transcription start site region 63522
Tssr63523 6 128945853 to 128945859 6 - TSS region transcription start site region 63523
Gm15987 6 128952353 to 128975029 22676 - antisense lncRNA gene predicted gene 15987
Tssr63524 6 128954158 to 128954164 6 - TSS region transcription start site region 63524
Tssr59080 6 128960597 to 128960600 3 + TSS region transcription start site region 59080
Tssr63525 6 128961084 to 128961086 2 - TSS region transcription start site region 63525
Tssr63526 6 128966921 to 128966932 11 - TSS region transcription start site region 63526
Tssr63527 6 128970288 to 128970306 18 - TSS region transcription start site region 63527
Tssr63528 6 128970329 to 128970343 14 - TSS region transcription start site region 63528
Tssr63529 6 128970474 to 128970480 6 - TSS region transcription start site region 63529
Mir7649 6 128974840 to 128974895 55 - miRNA gene microRNA 7649
Tssr63530 6 128974898 to 128974919 21 - TSS region transcription start site region 63530
Tssr63531 6 128974976 to 128975014 38 - TSS region transcription start site region 63531
Tssr63532 6 128975019 to 128975048 29 - TSS region transcription start site region 63532
Gm8778 6 128976869 to 128977972 1103 - pseudogene predicted gene 8778
Tssr59081 6 128992937 to 128992952 15 + TSS region transcription start site region 59081
BC064078 6 128992961 to 129006647 13686 + pseudogene cDNA sequence BC064078
Tssr59082 6 128992971 to 128993054 83 + TSS region transcription start site region 59082
Tssr59083 6 128993071 to 128993080 9 + TSS region transcription start site region 59083
Tssr63533 6 128996406 to 128996409 3 - TSS region transcription start site region 63533
Tssr59084 6 129008789 to 129008800 11 + TSS region transcription start site region 59084
Tssr59085 6 129014106 to 129014114 8 + TSS region transcription start site region 59085
Clec2f 6 129014112 to 129020527 6415 + protein coding gene C-type lectin domain family 2, member f
Gm16186 6 129030837 to 129031676 839 - pseudogene predicted gene 16186
Tssr59086 6 129036521 to 129036526 5 + TSS region transcription start site region 59086
Tssr59087 6 129036593 to 129036607 14 + TSS region transcription start site region 59087
Tssr2027 6 129036619 to 129036648 29 + TSS region transcription start site region 2027
Tssr59088 6 129036672 to 129036682 10 + TSS region transcription start site region 59088
Tssr59089 6 129036707 to 129036722 15 + TSS region transcription start site region 59089
Tssr59090 6 129036743 to 129036753 10 + TSS region transcription start site region 59090
Tssr63534 6 129038543 to 129038553 10 - TSS region transcription start site region 63534
Tssr59091 6 129045821 to 129045830 9 + TSS region transcription start site region 59091
Tssr59092 6 129045893 to 129045906 13 + TSS region transcription start site region 59092
Klrb1f 6 129045901 to 129057464 11563 + protein coding gene killer cell lectin-like receptor subfamily B member 1F
Tssr59093 6 129045910 to 129045932 22 + TSS region transcription start site region 59093
Tssr59094 6 129045937 to 129045938 1 + TSS region transcription start site region 59094
Gm43992 6 129046845 to 129047041 196 - unclassified gene predicted gene, 43992
Gm44000 6 129047277 to 129049835 2558 - antisense lncRNA gene predicted gene, 44000
Tssr63535 6 129047460 to 129047480 20 - TSS region transcription start site region 63535
Tssr63536 6 129049208 to 129049219 11 - TSS region transcription start site region 63536
Tssr63537 6 129049830 to 129049851 21 - TSS region transcription start site region 63537
Tssr59095 6 129057207 to 129057256 49 + TSS region transcription start site region 59095
Clec2e 6 129091998 to 129100913 8915 - protein coding gene C-type lectin domain family 2, member e
Tssr63538 6 129093351 to 129093355 4 - TSS region transcription start site region 63538
Tssr63539 6 129097260 to 129097272 12 - TSS region transcription start site region 63539
Tssr63540 6 129097329 to 129097338 9 - TSS region transcription start site region 63540
Tssr63541 6 129097495 to 129097506 11 - TSS region transcription start site region 63541
Tssr63542 6 129097701 to 129097714 13 - TSS region transcription start site region 63542
Tssr63543 6 129100904 to 129100925 21 - TSS region transcription start site region 63543
Tssr63544 6 129100938 to 129100947 9 - TSS region transcription start site region 63544
Klrb1-ps1 6 129116518 to 129129446 12928 + pseudogene killer cell lectin-like receptor subfamily B member 1, pseudogene 1
Tssr63545 6 129160207 to 129160215 8 - TSS region transcription start site region 63545
Gm26160 6 129174820 to 129174882 62 + snRNA gene predicted gene, 26160
Tssr59096 6 129180613 to 129180630 17 + TSS region transcription start site region 59096
Clec2d 6 129180615 to 129186534 5919 + protein coding gene C-type lectin domain family 2, member d
Tssr59097 6 129180639 to 129180656 17 + TSS region transcription start site region 59097
Tssr59098 6 129180917 to 129180939 22 + TSS region transcription start site region 59098
Tssr59099 6 129180951 to 129180968 17 + TSS region transcription start site region 59099
Tssr59100 6 129180975 to 129181013 38 + TSS region transcription start site region 59100
Tssr59101 6 129181268 to 129181307 39 + TSS region transcription start site region 59101
Tssr59102 6 129181343 to 129181361 18 + TSS region transcription start site region 59102
Tssr59103 6 129181852 to 129181863 11 + TSS region transcription start site region 59103
Tssr59104 6 129181922 to 129181933 11 + TSS region transcription start site region 59104
Tssr59105 6 129182678 to 129182689 11 + TSS region transcription start site region 59105
Tssr59106 6 129182702 to 129182725 23 + TSS region transcription start site region 59106
Tssr63546 6 129182833 to 129182844 11 - TSS region transcription start site region 63546
Tssr59107 6 129182932 to 129182950 18 + TSS region transcription start site region 59107
Tssr59108 6 129182998 to 129183009 11 + TSS region transcription start site region 59108
Tssr59109 6 129183111 to 129183131 20 + TSS region transcription start site region 59109
Tssr59110 6 129186044 to 129186049 5 + TSS region transcription start site region 59110
Tssr59111 6 129187156 to 129187167 11 + TSS region transcription start site region 59111
Tssr59112 6 129187308 to 129187320 12 + TSS region transcription start site region 59112
Tssr59113 6 129187400 to 129187412 12 + TSS region transcription start site region 59113
Tssr59114 6 129187508 to 129187520 12 + TSS region transcription start site region 59114
Tssr59115 6 129187525 to 129187538 13 + TSS region transcription start site region 59115
Gm27514 6 129189015 to 129189124 109 - miRNA gene predicted gene, 27514
Gm38906 6 129193473 to 129227598 34125 + lncRNA gene predicted gene, 38906
Tssr59116 6 129205500 to 129205506 6 + TSS region transcription start site region 59116
Tssr63547 6 129216343 to 129216364 21 - TSS region transcription start site region 63547
Tssr59117 6 129220062 to 129220071 9 + TSS region transcription start site region 59117
Tssr59118 6 129221933 to 129221955 22 + TSS region transcription start site region 59118
Tssr63548 6 129225441 to 129225447 6 - TSS region transcription start site region 63548
Tssr63549 6 129229087 to 129229119 32 - TSS region transcription start site region 63549
Tssr63550 6 129229237 to 129229245 8 - TSS region transcription start site region 63550
Tssr59119 6 129229376 to 129229383 7 + TSS region transcription start site region 59119
Tssr59120 6 129229395 to 129229415 20 + TSS region transcription start site region 59120
Tssr63551 6 129230262 to 129230293 31 - TSS region transcription start site region 63551
Tssr59121 6 129230502 to 129230513 11 + TSS region transcription start site region 59121
Tssr59122 6 129230536 to 129230547 11 + TSS region transcription start site region 59122
Tssr59123 6 129230595 to 129230598 3 + TSS region transcription start site region 59123
2310001H17Rik 6 129232623 to 129238482 5859 - lincRNA gene RIKEN cDNA 2310001H17 gene
Tssr63552 6 129232897 to 129232904 7 - TSS region transcription start site region 63552
Tssr63553 6 129232933 to 129232955 22 - TSS region transcription start site region 63553
Tssr63554 6 129232957 to 129232985 28 - TSS region transcription start site region 63554
Tssr59124 6 129233058 to 129233112 54 + TSS region transcription start site region 59124
Tssr63555 6 129233182 to 129233187 5 - TSS region transcription start site region 63555
Tssr59125 6 129233378 to 129233393 15 + TSS region transcription start site region 59125
Tssr59126 6 129233811 to 129233833 22 + TSS region transcription start site region 59126
Tssr63556 6 129233953 to 129233960 7 - TSS region transcription start site region 63556
Tssr63557 6 129233969 to 129233979 10 - TSS region transcription start site region 63557
Tssr63558 6 129233980 to 129233999 19 - TSS region transcription start site region 63558
Tssr63559 6 129234019 to 129234027 8 - TSS region transcription start site region 63559
Cpgi18062 6 129234131 to 129234573 442 CpG island CpG island 18062
Tssr63560 6 129234755 to 129234770 15 - TSS region transcription start site region 63560
Tssr59127 6 129234907 to 129234917 10 + TSS region transcription start site region 59127
Tssr59128 6 129235089 to 129235101 12 + TSS region transcription start site region 59128
Tssr63561 6 129235816 to 129235831 15 - TSS region transcription start site region 63561
Tssr2028 6 129236113 to 129236129 16 + TSS region transcription start site region 2028
Tssr59129 6 129236162 to 129236188 26 + TSS region transcription start site region 59129
Tssr63562 6 129236201 to 129236214 13 - TSS region transcription start site region 63562
Tssr59130 6 129237000 to 129237016 16 + TSS region transcription start site region 59130
Tssr63563 6 129237025 to 129237042 17 - TSS region transcription start site region 63563
Tssr63564 6 129237046 to 129237064 18 - TSS region transcription start site region 63564
Tssr63565 6 129237086 to 129237099 13 - TSS region transcription start site region 63565
Tssr63566 6 129237172 to 129237179 7 - TSS region transcription start site region 63566
Tssr59131 6 129237259 to 129237270 11 + TSS region transcription start site region 59131
Tssr59132 6 129237292 to 129237314 22 + TSS region transcription start site region 59132
Tssr63567 6 129237783 to 129237830 47 - TSS region transcription start site region 63567
Tssr63568 6 129237967 to 129237987 20 - TSS region transcription start site region 63568
Tssr63569 6 129238004 to 129238015 11 - TSS region transcription start site region 63569
Tssr63570 6 129238040 to 129238051 11 - TSS region transcription start site region 63570
Tssr63571 6 129238052 to 129238082 30 - TSS region transcription start site region 63571
Tssr59133 6 129238158 to 129238199 41 + TSS region transcription start site region 59133
Gm47861 6 129238276 to 129248328 10052 + lincRNA gene predicted gene, 47861
Tssr59134 6 129238421 to 129238429 8 + TSS region transcription start site region 59134
Tssr63572 6 129238483 to 129238505 22 - TSS region transcription start site region 63572
Tssr63573 6 129239744 to 129239771 27 - TSS region transcription start site region 63573
Tssr63574 6 129239795 to 129239806 11 - TSS region transcription start site region 63574
Tssr63575 6 129239826 to 129239833 7 - TSS region transcription start site region 63575
Cd69 6 129267324 to 129275369 8045 - protein coding gene CD69 antigen
Tssr59135 6 129267994 to 129268038 44 + TSS region transcription start site region 59135
Tssr63576 6 129268017 to 129268033 16 - TSS region transcription start site region 63576
Tssr63577 6 129268067 to 129268077 10 - TSS region transcription start site region 63577
Tssr59136 6 129268083 to 129268108 25 + TSS region transcription start site region 59136
Tssr63578 6 129268294 to 129268302 8 - TSS region transcription start site region 63578
Tssr63579 6 129269567 to 129269579 12 - TSS region transcription start site region 63579
Tssr63580 6 129269592 to 129269593 1 - TSS region transcription start site region 63580
Tssr63581 6 129269664 to 129269702 38 - TSS region transcription start site region 63581
Tssr63582 6 129270050 to 129270060 10 - TSS region transcription start site region 63582
Tssr63583 6 129271451 to 129271466 15 - TSS region transcription start site region 63583
Tssr63584 6 129271810 to 129271822 12 - TSS region transcription start site region 63584
Tssr63585 6 129274409 to 129274417 8 - TSS region transcription start site region 63585
Tssr63586 6 129274512 to 129274522 10 - TSS region transcription start site region 63586
Tssr63587 6 129275088 to 129275099 11 - TSS region transcription start site region 63587
Tssr63588 6 129275360 to 129275376 16 - TSS region transcription start site region 63588
Tssr63589 6 129275433 to 129275439 6 - TSS region transcription start site region 63589
Tssr59137 6 129275461 to 129275491 30 + TSS region transcription start site region 59137