Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:128742586-129032592

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm43907 6 128744644 to 128744760 116 + pseudogene predicted gene, 43907
Cpgi18056 6 128760196 to 128761030 834 CpG island CpG island 18056
Cpgi18057 6 128763930 to 128764553 623 CpG island CpG island 18057
Klrb1c 6 128778485 to 128788641 10156 - protein coding gene killer cell lectin-like receptor subfamily B member 1C
Gm44511 6 128780285 to 128826315 46030 - protein coding gene predicted gene 44511
Tssr63509 6 128788497 to 128788534 37 - TSS region transcription start site region 63509
Tssr63510 6 128788538 to 128788559 21 - TSS region transcription start site region 63510
Tssr63511 6 128788566 to 128788574 8 - TSS region transcription start site region 63511
Tssr63512 6 128788598 to 128788614 16 - TSS region transcription start site region 63512
Gm34755 6 128798913 to 128805831 6918 + lncRNA gene predicted gene, 34755
Cpgi18058 6 128798986 to 128800007 1021 CpG island CpG island 18058
Cpgi18059 6 128802901 to 128803393 492 CpG island CpG island 18059
Tssr63513 6 128803106 to 128803110 4 - TSS region transcription start site region 63513
Klrb1b 6 128813706 to 128826331 12625 - protein coding gene killer cell lectin-like receptor subfamily B member 1B
Tssr63514 6 128826277 to 128826330 53 - TSS region transcription start site region 63514
D6Mit338.1 6 128834803 to 128834916 113 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 338.1
Cmv3 6 128834894 to 137439929 8605035 QTL cytomegalovirus resistance 3
D6Mit135 6 128834894 to 128835032 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 135
D6Mit338 6 128834931 to 128835048 117 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 338
Fl1n 6 128835032 to 45314059 -83520973 QTL fatty liver 1 in NSY
Cpgi18060 6 128838355 to 128839484 1129 CpG island CpG island 18060
Tssr59076 6 128838448 to 128838452 4 + TSS region transcription start site region 59076
Tssr63515 6 128839623 to 128839648 25 - TSS region transcription start site region 63515
D6Mit289 6 128839901 to 128840035 134 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 289
Cpgi18061 6 128842538 to 128843865 1327 CpG island CpG island 18061
Gm44066 6 128842558 to 128843171 613 - lincRNA gene predicted gene, 44066
Gm44067 6 128843786 to 128846959 3173 - lincRNA gene predicted gene, 44067
Gm26656 6 128843786 to 128846959 3173 + lincRNA gene predicted gene, 26656
BC035044 6 128849090 to 128891126 42036 - protein coding gene cDNA sequence BC035044
Gm34849 6 128857033 to 128860097 3064 + lncRNA gene predicted gene, 34849
Gm44078 6 128862549 to 128865194 2645 - unclassified gene predicted gene, 44078
Gm8774 6 128883852 to 128884540 688 + pseudogene predicted gene 8774
Tssr59077 6 128887586 to 128887592 6 + TSS region transcription start site region 59077
Clec2i 6 128887588 to 128898167 10579 + protein coding gene C-type lectin domain family 2, member i
Tssr63516 6 128890959 to 128890962 3 - TSS region transcription start site region 63516
Tssr63517 6 128890992 to 128891001 9 - TSS region transcription start site region 63517
Tssr63518 6 128891049 to 128891101 52 - TSS region transcription start site region 63518
Tssr63519 6 128891105 to 128891178 73 - TSS region transcription start site region 63519
Gm38905 6 128914114 to 128920059 5945 + lncRNA gene predicted gene, 38905
Tssr59078 6 128914258 to 128914273 15 + TSS region transcription start site region 59078
Gm44223 6 128919867 to 128919980 113 + pseudogene predicted gene, 44223
Gm27336 6 128931793 to 128931848 55 - miRNA gene predicted gene, 27336
Tssr63520 6 128933655 to 128933668 13 - TSS region transcription start site region 63520
Tssr63521 6 128934305 to 128934347 42 - TSS region transcription start site region 63521
Tssr59079 6 128934373 to 128934387 14 + TSS region transcription start site region 59079
Clec2g 6 128934381 to 128984707 50326 + protein coding gene C-type lectin domain family 2, member g
Tssr63522 6 128945530 to 128945552 22 - TSS region transcription start site region 63522
Tssr63523 6 128945853 to 128945859 6 - TSS region transcription start site region 63523
Gm15987 6 128952353 to 128975029 22676 - antisense lncRNA gene predicted gene 15987
Tssr63524 6 128954158 to 128954164 6 - TSS region transcription start site region 63524
Tssr59080 6 128960597 to 128960600 3 + TSS region transcription start site region 59080
Tssr63525 6 128961084 to 128961086 2 - TSS region transcription start site region 63525
Tssr63526 6 128966921 to 128966932 11 - TSS region transcription start site region 63526
Tssr63527 6 128970288 to 128970306 18 - TSS region transcription start site region 63527
Tssr63528 6 128970329 to 128970343 14 - TSS region transcription start site region 63528
Tssr63529 6 128970474 to 128970480 6 - TSS region transcription start site region 63529
Mir7649 6 128974840 to 128974895 55 - miRNA gene microRNA 7649
Tssr63530 6 128974898 to 128974919 21 - TSS region transcription start site region 63530
Tssr63531 6 128974976 to 128975014 38 - TSS region transcription start site region 63531
Tssr63532 6 128975019 to 128975048 29 - TSS region transcription start site region 63532
Gm8778 6 128976869 to 128977972 1103 - pseudogene predicted gene 8778
Tssr59081 6 128992937 to 128992952 15 + TSS region transcription start site region 59081
BC064078 6 128992961 to 129006647 13686 + pseudogene cDNA sequence BC064078
Tssr59082 6 128992971 to 128993054 83 + TSS region transcription start site region 59082
Tssr59083 6 128993071 to 128993080 9 + TSS region transcription start site region 59083
Tssr63533 6 128996406 to 128996409 3 - TSS region transcription start site region 63533
Tssr59084 6 129008789 to 129008800 11 + TSS region transcription start site region 59084
Tssr59085 6 129014106 to 129014114 8 + TSS region transcription start site region 59085
Clec2f 6 129014112 to 129020527 6415 + protein coding gene C-type lectin domain family 2, member f
Gm16186 6 129030837 to 129031676 839 - pseudogene predicted gene 16186