Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:128517800-128897813

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ath37 6 116664897 to 128519025 11854128 QTL atherosclerosis 37
Pzp 6 128483567 to 128526720 43153 - protein coding gene PZP, alpha-2-macroglobulin like
Ath38 6 128518894 to 136316178 7797284 QTL atherosclerosis 38
D6Mit61 6 128518894 to 128519025 131 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 61
Tssr63483 6 128519427 to 128519457 30 - TSS region transcription start site region 63483
Tssr63484 6 128519495 to 128519520 25 - TSS region transcription start site region 63484
Tssr63485 6 128521120 to 128521137 17 - TSS region transcription start site region 63485
Tssr63486 6 128521184 to 128521194 10 - TSS region transcription start site region 63486
Tssr63487 6 128522044 to 128522058 14 - TSS region transcription start site region 63487
Tssr63488 6 128522065 to 128522080 15 - TSS region transcription start site region 63488
Tssr63489 6 128522083 to 128522117 34 - TSS region transcription start site region 63489
Tssr63490 6 128522119 to 128522142 23 - TSS region transcription start site region 63490
Tssr59068 6 128523962 to 128524001 39 + TSS region transcription start site region 59068
Tssr63491 6 128524050 to 128524132 82 - TSS region transcription start site region 63491
Tssr63492 6 128525170 to 128525209 39 - TSS region transcription start site region 63492
Tssr63493 6 128525281 to 128525290 9 - TSS region transcription start site region 63493
Tssr63494 6 128526687 to 128526692 5 - TSS region transcription start site region 63494
Tssr63495 6 128526704 to 128526720 16 - TSS region transcription start site region 63495
Tssr2026 6 128526853 to 128526854 1 + TSS region transcription start site region 2026
Tssr63496 6 128526909 to 128526929 20 - TSS region transcription start site region 63496
Gm5318 6 128529320 to 128529725 405 - pseudogene predicted gene 5318
Gm8724 6 128530918 to 128531400 482 - pseudogene predicted pseudogene 8724
A2ml1 6 128539822 to 128581606 41784 - protein coding gene alpha-2-macroglobulin like 1
Tssr63497 6 128541041 to 128541053 12 - TSS region transcription start site region 63497
Tssr63498 6 128543312 to 128543321 9 - TSS region transcription start site region 63498
Tssr63499 6 128543337 to 128543376 39 - TSS region transcription start site region 63499
Tssr63500 6 128543379 to 128543436 57 - TSS region transcription start site region 63500
Cpgi18054 6 128566826 to 128567005 179 CpG island CpG island 18054
Tssr63501 6 128581597 to 128581612 15 - TSS region transcription start site region 63501
Tssr63502 6 128583867 to 128583868 1 - TSS region transcription start site region 63502
Gm44009 6 128585625 to 128588025 2400 - lincRNA gene predicted gene, 44009
Tssr63503 6 128600063 to 128600067 4 - TSS region transcription start site region 63503
Klrb1a 6 128609227 to 128622934 13707 - protein coding gene killer cell lectin-like receptor subfamily B member 1A
Tssr63504 6 128622831 to 128622847 16 - TSS region transcription start site region 63504
Tssr63505 6 128622873 to 128622895 22 - TSS region transcription start site region 63505
Gm44478 6 128642999 to 128643112 113 - pseudogene predicted gene, 44478
Gm5884 6 128644913 to 128646391 1478 + pseudogene predicted pseudogene 5884
Cpgi18055 6 128645665 to 128645848 183 CpG island CpG island 18055
Gm44420 6 128648576 to 128649065 489 - pseudogene predicted gene, 44420
Gm34617 6 128648735 to 128659122 10387 + lncRNA gene predicted gene, 34617
Tssr59069 6 128648872 to 128648886 14 + TSS region transcription start site region 59069
Tssr59070 6 128648960 to 128648965 5 + TSS region transcription start site region 59070
Clec2j 6 128654923 to 128657091 2168 - protein coding gene C-type lectin domain family 2, member J
Tssr59071 6 128657976 to 128657989 13 + TSS region transcription start site region 59071
Gm44216 6 128658110 to 128658266 156 + pseudogene predicted gene, 44216
Tssr59072 6 128662379 to 128662396 17 + TSS region transcription start site region 59072
Clec2h 6 128662385 to 128677374 14989 + protein coding gene C-type lectin domain family 2, member h
D6Mit257 6 128673302 to 128673425 123 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 257
Tssr59073 6 128674001 to 128674013 12 + TSS region transcription start site region 59073
Tssr59074 6 128674750 to 128674761 11 + TSS region transcription start site region 59074
Tssr59075 6 128676619 to 128676624 5 + TSS region transcription start site region 59075
Gm44215 6 128691073 to 128693783 2710 - unclassified gene predicted gene, 44215
Klrb1 6 128705836 to 128723059 17223 - protein coding gene killer cell lectin-like receptor subfamily B member 1
Tssr63506 6 128707768 to 128707777 9 - TSS region transcription start site region 63506
Tssr63507 6 128707780 to 128707788 8 - TSS region transcription start site region 63507
Tssr63508 6 128707800 to 128707813 13 - TSS region transcription start site region 63508
Gm43907 6 128744644 to 128744760 116 + pseudogene predicted gene, 43907
Cpgi18056 6 128760196 to 128761030 834 CpG island CpG island 18056
Cpgi18057 6 128763930 to 128764553 623 CpG island CpG island 18057
Klrb1c 6 128778485 to 128788641 10156 - protein coding gene killer cell lectin-like receptor subfamily B member 1C
Gm44511 6 128780285 to 128826315 46030 - protein coding gene predicted gene 44511
Tssr63509 6 128788497 to 128788534 37 - TSS region transcription start site region 63509
Tssr63510 6 128788538 to 128788559 21 - TSS region transcription start site region 63510
Tssr63511 6 128788566 to 128788574 8 - TSS region transcription start site region 63511
Tssr63512 6 128788598 to 128788614 16 - TSS region transcription start site region 63512
Gm34755 6 128798913 to 128805831 6918 + lncRNA gene predicted gene, 34755
Cpgi18058 6 128798986 to 128800007 1021 CpG island CpG island 18058
Cpgi18059 6 128802901 to 128803393 492 CpG island CpG island 18059
Tssr63513 6 128803106 to 128803110 4 - TSS region transcription start site region 63513
Klrb1b 6 128813706 to 128826331 12625 - protein coding gene killer cell lectin-like receptor subfamily B member 1B
Tssr63514 6 128826277 to 128826330 53 - TSS region transcription start site region 63514
D6Mit338.1 6 128834803 to 128834916 113 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 338.1
Cmv3 6 128834894 to 137439929 8605035 QTL cytomegalovirus resistance 3
D6Mit135 6 128834894 to 128835032 138 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 135
D6Mit338 6 128834931 to 128835048 117 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 338
Fl1n 6 128835032 to 45314059 -83520973 QTL fatty liver 1 in NSY
Cpgi18060 6 128838355 to 128839484 1129 CpG island CpG island 18060
Tssr59076 6 128838448 to 128838452 4 + TSS region transcription start site region 59076
Tssr63515 6 128839623 to 128839648 25 - TSS region transcription start site region 63515
D6Mit289 6 128839901 to 128840035 134 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 289
Cpgi18061 6 128842538 to 128843865 1327 CpG island CpG island 18061
Gm44066 6 128842558 to 128843171 613 - lincRNA gene predicted gene, 44066
Gm44067 6 128843786 to 128846959 3173 - lincRNA gene predicted gene, 44067
Gm26656 6 128843786 to 128846959 3173 + lincRNA gene predicted gene, 26656
BC035044 6 128849090 to 128891126 42036 - protein coding gene cDNA sequence BC035044
Gm34849 6 128857033 to 128860097 3064 + lncRNA gene predicted gene, 34849
Gm44078 6 128862549 to 128865194 2645 - unclassified gene predicted gene, 44078
Gm8774 6 128883852 to 128884540 688 + pseudogene predicted gene 8774
Tssr59077 6 128887586 to 128887592 6 + TSS region transcription start site region 59077
Clec2i 6 128887588 to 128898167 10579 + protein coding gene C-type lectin domain family 2, member i
Tssr63516 6 128890959 to 128890962 3 - TSS region transcription start site region 63516
Tssr63517 6 128890992 to 128891001 9 - TSS region transcription start site region 63517
Tssr63518 6 128891049 to 128891101 52 - TSS region transcription start site region 63518
Tssr63519 6 128891105 to 128891178 73 - TSS region transcription start site region 63519