Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:128237271-128488501

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tead4 6 128227143 to 128300813 73670 - protein coding gene TEA domain family member 4
Tssr63417 6 128243478 to 128243503 25 - TSS region transcription start site region 63417
Tssr63418 6 128244429 to 128244433 4 - TSS region transcription start site region 63418
Tssr63419 6 128279130 to 128279137 7 - TSS region transcription start site region 63419
Gm21893 6 128294102 to 128294498 396 + pseudogene predicted gene, 21893
Tssr63420 6 128297089 to 128297107 18 - TSS region transcription start site region 63420
Cpgi18049 6 128299655 to 128301016 1361 CpG island CpG island 18049
Tssr63421 6 128300362 to 128300424 62 - TSS region transcription start site region 63421
Tssr63422 6 128300430 to 128300435 5 - TSS region transcription start site region 63422
Tssr63423 6 128300439 to 128300444 5 - TSS region transcription start site region 63423
Tssr63424 6 128300453 to 128300501 48 - TSS region transcription start site region 63424
Tssr63425 6 128300503 to 128300525 22 - TSS region transcription start site region 63425
Tssr63426 6 128300552 to 128300562 10 - TSS region transcription start site region 63426
Rpl18-ps2 6 128313357 to 128313923 566 + pseudogene ribosomal protein L18, pseudogene 2
Tulp3 6 128321161 to 128355851 34690 - protein coding gene tubby-like protein 3
Tssr63427 6 128340303 to 128340308 5 - TSS region transcription start site region 63427
Gm44190 6 128348754 to 128350154 1400 - sense intronic lncRNA gene predicted gene, 44190
D6Ertd90e 6 128354244 to 128354490 246 DNA segment DNA segment, Chr 6, ERATO Doi 90, expressed
Cpgi18050 6 128355177 to 128356216 1039 CpG island CpG island 18050
Tssr63428 6 128355797 to 128355824 27 - TSS region transcription start site region 63428
Tssr63429 6 128355826 to 128355856 30 - TSS region transcription start site region 63429
Gm26770 6 128356004 to 128358837 2833 + antisense lncRNA gene predicted gene, 26770
Rhno1 6 128357000 to 128362911 5911 - protein coding gene RAD9-HUS1-RAD1 interacting nuclear orphan 1
Tssr63430 6 128358197 to 128358202 5 - TSS region transcription start site region 63430
Gm44371 6 128359518 to 128359984 466 + unclassified gene predicted gene, 44371
Cpgi18051 6 128362271 to 128363501 1230 CpG island CpG island 18051
Tssr63431 6 128362502 to 128362523 21 - TSS region transcription start site region 63431
Tssr63432 6 128362667 to 128362686 19 - TSS region transcription start site region 63432
Tssr63433 6 128362692 to 128362724 32 - TSS region transcription start site region 63433
Tssr59058 6 128362754 to 128362774 20 + TSS region transcription start site region 59058
Tssr59059 6 128362794 to 128362803 9 + TSS region transcription start site region 59059
Tssr63434 6 128362861 to 128362926 65 - TSS region transcription start site region 63434
Tssr59060 6 128362919 to 128363058 139 + TSS region transcription start site region 59060
Foxm1 6 128362994 to 128375886 12892 + protein coding gene forkhead box M1
Tssr59061 6 128375464 to 128375512 48 + TSS region transcription start site region 59061
Gm44596 6 128375503 to 128407475 31972 + protein coding gene predicted gene 44596
Tex52 6 128375510 to 128385144 9634 + protein coding gene testis expressed 52
Gm43965 6 128376981 to 128377769 788 + unclassified gene predicted gene, 43965
Gm15862 6 128381584 to 128399740 18156 - antisense lncRNA gene predicted gene 15862
Nrip2 6 128397632 to 128409121 11489 + protein coding gene nuclear receptor interacting protein 2
Tssr59062 6 128399788 to 128399825 37 + TSS region transcription start site region 59062
Tssr59063 6 128399881 to 128399919 38 + TSS region transcription start site region 59063
Itfg2 6 128409444 to 128424931 15487 - protein coding gene integrin alpha FG-GAP repeat containing 2
Tssr63435 6 128413686 to 128413728 42 - TSS region transcription start site region 63435
Cpgi18052 6 128424434 to 128425058 624 CpG island CpG island 18052
Tssr59064 6 128424715 to 128424729 14 + TSS region transcription start site region 59064
Tssr63436 6 128424883 to 128424935 52 - TSS region transcription start site region 63436
Fkbp4 6 128430107 to 128438631 8524 - protein coding gene FK506 binding protein 4
Tssr63437 6 128430563 to 128430605 42 - TSS region transcription start site region 63437
Tssr63438 6 128434383 to 128434396 13 - TSS region transcription start site region 63438
Tssr63439 6 128434783 to 128434799 16 - TSS region transcription start site region 63439
Cpgi18053 6 128437572 to 128439331 1759 CpG island CpG island 18053
Tssr63440 6 128437704 to 128437730 26 - TSS region transcription start site region 63440
Tssr63441 6 128438515 to 128438551 36 - TSS region transcription start site region 63441
Tssr63442 6 128438560 to 128438571 11 - TSS region transcription start site region 63442
Tssr63443 6 128438576 to 128438588 12 - TSS region transcription start site region 63443
Tssr63444 6 128438593 to 128438606 13 - TSS region transcription start site region 63444
Tssr63445 6 128438618 to 128438636 18 - TSS region transcription start site region 63445
Tssr63446 6 128438638 to 128438667 29 - TSS region transcription start site region 63446
Tssr63447 6 128438673 to 128438698 25 - TSS region transcription start site region 63447
Gm10069 6 128438757 to 128503281 64524 + antisense lncRNA gene predicted gene 10069
Tssr59065 6 128438788 to 128438842 54 + TSS region transcription start site region 59065
Stambp-ps1 6 128447096 to 128448342 1246 - pseudogene STAM binding protein, pseudogene 1
Gm8719 6 128472855 to 128473388 533 - pseudogene predicted pseudogene 8719
Pzp 6 128483567 to 128526720 43153 - protein coding gene PZP, alpha-2-macroglobulin like
Tssr59066 6 128485593 to 128485605 12 + TSS region transcription start site region 59066
Tssr63448 6 128485611 to 128485628 17 - TSS region transcription start site region 63448
Tssr63449 6 128485644 to 128485667 23 - TSS region transcription start site region 63449
Tssr63450 6 128486148 to 128486167 19 - TSS region transcription start site region 63450
Tssr63451 6 128486178 to 128486197 19 - TSS region transcription start site region 63451
Tssr63452 6 128486918 to 128486953 35 - TSS region transcription start site region 63452
Tssr63453 6 128486962 to 128486985 23 - TSS region transcription start site region 63453
Tssr59067 6 128487422 to 128487437 15 + TSS region transcription start site region 59067
Tssr63454 6 128487434 to 128487445 11 - TSS region transcription start site region 63454
Tssr63455 6 128487451 to 128487481 30 - TSS region transcription start site region 63455
Tssr63456 6 128487482 to 128487506 24 - TSS region transcription start site region 63456
Tssr63457 6 128487523 to 128487547 24 - TSS region transcription start site region 63457
Tssr63458 6 128487921 to 128487931 10 - TSS region transcription start site region 63458
Tssr63459 6 128487936 to 128487959 23 - TSS region transcription start site region 63459
Tssr63460 6 128487964 to 128487982 18 - TSS region transcription start site region 63460
Tssr63461 6 128487994 to 128488009 15 - TSS region transcription start site region 63461
Tssr63462 6 128488019 to 128488031 12 - TSS region transcription start site region 63462
Tssr63463 6 128488080 to 128488101 21 - TSS region transcription start site region 63463
Tssr63464 6 128488105 to 128488117 12 - TSS region transcription start site region 63464