Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:12773695-13754606

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr59833 6 12786654 to 12786666 12 - TSS region transcription start site region 59833
Gm18221 6 12809066 to 12874600 65534 - pseudogene predicted gene, 18221
Gm15529 6 12857397 to 12858390 993 + pseudogene predicted gene 15529
Tssr54949 6 12911081 to 12911085 4 + TSS region transcription start site region 54949
Gm44472 6 12917525 to 12918467 942 + unclassified gene predicted gene, 44472
Gm5300 6 13055595 to 13056597 1002 - pseudogene predicted gene 5300
Cpgi17164 6 13069585 to 13070247 662 CpG island CpG island 17164
Tssr54950 6 13069750 to 13069755 5 + TSS region transcription start site region 54950
Tssr54951 6 13069758 to 13069866 108 + TSS region transcription start site region 54951
Tmem106b 6 13069759 to 13089269 19510 + protein coding gene transmembrane protein 106B
Tssr54952 6 13069879 to 13069895 16 + TSS region transcription start site region 54952
Gm24985 6 13111299 to 13111427 128 + snoRNA gene predicted gene, 24985
Vwde 6 13185610 to 13224965 39355 - protein coding gene von Willebrand factor D and EGF domains
Gm725 6 13263695 to 13264606 911 + protein coding gene predicted gene 725
D6Mit83 6 13400268 to 13400420 152 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 83
Tssr54953 6 13413334 to 13413361 27 + TSS region transcription start site region 54953
1700016P04Rik 6 13413337 to 13415996 2659 + lincRNA gene RIKEN cDNA 1700016P04 gene
Tssr54954 6 13413365 to 13413369 4 + TSS region transcription start site region 54954
Gm2796 6 13461462 to 13461957 495 - pseudogene predicted gene 2796
Tssr59834 6 13461995 to 13461996 1 - TSS region transcription start site region 59834
Gm25737 6 13549506 to 13549612 106 + snRNA gene predicted gene, 25737
Tmem168 6 13580687 to 13608100 27413 - protein coding gene transmembrane protein 168
Cpgi17165 6 13607470 to 13608578 1108 CpG island CpG island 17165
Tssr59835 6 13608011 to 13608050 39 - TSS region transcription start site region 59835
Bmt2 6 13625675 to 13677966 52291 - protein coding gene base methyltransferase of 25S rRNA 2
Tssr59836 6 13650969 to 13650988 19 - TSS region transcription start site region 59836
Tssr59837 6 13654130 to 13654157 27 - TSS region transcription start site region 59837
Cpgi17166 6 13677056 to 13678363 1307 CpG island CpG island 17166
Tssr59838 6 13677890 to 13677895 5 - TSS region transcription start site region 59838
Tssr59839 6 13677907 to 13677923 16 - TSS region transcription start site region 59839
Tssr59840 6 13677930 to 13677974 44 - TSS region transcription start site region 59840
Tssr54955 6 13682626 to 13682632 6 + TSS region transcription start site region 54955
Gm40354 6 13749475 to 13776712 27237 + lncRNA gene predicted gene, 40354