Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:127461338-127774248

36 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Parp11	6	127446840 to 127494261	47421	+	protein coding gene	poly (ADP-ribose) polymerase family, member 11
Tssr59035	6	127474137 to 127474151	14	+	TSS region	transcription start site region 59035
Tssr2024	6	127474175 to 127474193	18	+	TSS region	transcription start site region 2024
Gm43633	6	127485793 to 127488122	2329	+	unclassified gene	predicted gene 43633
Tssr2025	6	127543152 to 127543153	1	+	TSS region	transcription start site region 2025
Cracr2a	6	127561064 to 127673733	112669	+	protein coding gene	calcium release activated channel regulator 2A
Cpgi18041	6	127561141 to 127561544	403		CpG island	CpG island 18041
Tssr59036	6	127561207 to 127561241	34	+	TSS region	transcription start site region 59036
Tssr59037	6	127561312 to 127561343	31	+	TSS region	transcription start site region 59037
Tssr59038	6	127561347 to 127561369	22	+	TSS region	transcription start site region 59038
Tssr59039	6	127577937 to 127577938	1	+	TSS region	transcription start site region 59039
Tssr59040	6	127577945 to 127577957	12	+	TSS region	transcription start site region 59040
Tssr59041	6	127577963 to 127577979	16	+	TSS region	transcription start site region 59041
Tssr59042	6	127577981 to 127578000	19	+	TSS region	transcription start site region 59042
Tssr59043	6	127582123 to 127582186	63	+	TSS region	transcription start site region 59043
Tssr59044	6	127582201 to 127582212	11	+	TSS region	transcription start site region 59044
D6Mit335	6	127587651 to 127587777	126		DNA segment	DNA Segment, Chr 6, Massachusetts Institute of Technology 335
D6Mit368	6	127639952 to 127640068	116		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 368
Gm43634	6	127644440 to 127657925	13485	+	lincRNA gene	predicted gene 43634
Prmt8	6	127689011 to 127769472	80461	-	protein coding gene	protein arginine N-methyltransferase 8
Gm38900	6	127723167 to 127726518	3351	-	lncRNA gene	predicted gene, 38900
Tssr63381	6	127732803 to 127732814	11	-	TSS region	transcription start site region 63381
Gm42739	6	127763748 to 127763973	225	+	pseudogene	predicted gene 42739
Cpgi18042	6	127766646 to 127767007	361		CpG island	CpG island 18042
Cpgi18043	6	127767222 to 127769863	2641		CpG island	CpG island 18043
Gm42738	6	127767542 to 127768905	1363	+	antisense lncRNA gene	predicted gene 42738
Tssr63382	6	127768775 to 127768790	15	-	TSS region	transcription start site region 63382
Tssr63383	6	127768968 to 127768993	25	-	TSS region	transcription start site region 63383
Tssr63384	6	127769112 to 127769135	23	-	TSS region	transcription start site region 63384
Tssr63385	6	127769142 to 127769164	22	-	TSS region	transcription start site region 63385
Tssr63386	6	127769174 to 127769196	22	-	TSS region	transcription start site region 63386
Tssr63387	6	127769306 to 127769364	58	-	TSS region	transcription start site region 63387
Tssr63388	6	127769427 to 127769456	29	-	TSS region	transcription start site region 63388
Tssr63389	6	127769700 to 127769708	8	-	TSS region	transcription start site region 63389
Tssr63390	6	127769721 to 127769731	10	-	TSS region	transcription start site region 63390
Gm42741	6	127772373 to 127774650	2277	-	unclassified gene	predicted gene 42741