Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:127427937-127727938

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr59026 6 127434427 to 127434439 12 + TSS region transcription start site region 59026
Tssr59027 6 127446792 to 127446803 11 + TSS region transcription start site region 59027
Tssr59028 6 127446819 to 127446872 53 + TSS region transcription start site region 59028
Parp11 6 127446840 to 127494261 47421 + protein coding gene poly (ADP-ribose) polymerase family, member 11
Tssr59029 6 127446875 to 127446888 13 + TSS region transcription start site region 59029
Gm34148 6 127447135 to 127448648 1513 - lncRNA gene predicted gene, 34148
Cpgi18040 6 127453361 to 127454055 694 CpG island CpG island 18040
Tssr59030 6 127453608 to 127453662 54 + TSS region transcription start site region 59030
Tssr59031 6 127453667 to 127453685 18 + TSS region transcription start site region 59031
Tssr59032 6 127453705 to 127453716 11 + TSS region transcription start site region 59032
Tssr59033 6 127455313 to 127455316 3 + TSS region transcription start site region 59033
Tssr59034 6 127457356 to 127457371 15 + TSS region transcription start site region 59034
Tssr63380 6 127458625 to 127458638 13 - TSS region transcription start site region 63380
Tssr59035 6 127474137 to 127474151 14 + TSS region transcription start site region 59035
Tssr2024 6 127474175 to 127474193 18 + TSS region transcription start site region 2024
Gm43633 6 127485793 to 127488122 2329 + unclassified gene predicted gene 43633
Tssr2025 6 127543152 to 127543153 1 + TSS region transcription start site region 2025
Cracr2a 6 127561064 to 127673733 112669 + protein coding gene calcium release activated channel regulator 2A
Cpgi18041 6 127561141 to 127561544 403 CpG island CpG island 18041
Tssr59036 6 127561207 to 127561241 34 + TSS region transcription start site region 59036
Tssr59037 6 127561312 to 127561343 31 + TSS region transcription start site region 59037
Tssr59038 6 127561347 to 127561369 22 + TSS region transcription start site region 59038
Tssr59039 6 127577937 to 127577938 1 + TSS region transcription start site region 59039
Tssr59040 6 127577945 to 127577957 12 + TSS region transcription start site region 59040
Tssr59041 6 127577963 to 127577979 16 + TSS region transcription start site region 59041
Tssr59042 6 127577981 to 127578000 19 + TSS region transcription start site region 59042
Tssr59043 6 127582123 to 127582186 63 + TSS region transcription start site region 59043
Tssr59044 6 127582201 to 127582212 11 + TSS region transcription start site region 59044
D6Mit335 6 127587651 to 127587777 126 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 335
D6Mit368 6 127639952 to 127640068 116 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 368
Gm43634 6 127644440 to 127657925 13485 + lincRNA gene predicted gene 43634
Prmt8 6 127689011 to 127769472 80461 - protein coding gene protein arginine N-methyltransferase 8
Gm38900 6 127723167 to 127726518 3351 - lncRNA gene predicted gene, 38900