Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:12727525-13108467

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Thsd7a 6 12311608 to 12749253 437645 - protein coding gene thrombospondin, type I, domain containing 7A
n-R5s160 6 12742899 to 12743018 119 + rRNA gene nuclear encoded rRNA 5S 160
Cpgi17163 6 12748690 to 12749551 861 CpG island CpG island 17163
Tssr59828 6 12749070 to 12749079 9 - TSS region transcription start site region 59828
Tssr59829 6 12749084 to 12749095 11 - TSS region transcription start site region 59829
Tssr59830 6 12749153 to 12749167 14 - TSS region transcription start site region 59830
Tssr1780 6 12749185 to 12749190 5 - TSS region transcription start site region 1780
Tssr59831 6 12749193 to 12749209 16 - TSS region transcription start site region 59831
Tssr59832 6 12749435 to 12749440 5 - TSS region transcription start site region 59832
Tssr59833 6 12786654 to 12786666 12 - TSS region transcription start site region 59833
Gm18221 6 12809066 to 12874600 65534 - pseudogene predicted gene, 18221
Gm15529 6 12857397 to 12858390 993 + pseudogene predicted gene 15529
Tssr54949 6 12911081 to 12911085 4 + TSS region transcription start site region 54949
Gm44472 6 12917525 to 12918467 942 + unclassified gene predicted gene, 44472
Gm5300 6 13055595 to 13056597 1002 - pseudogene predicted gene 5300
Cpgi17164 6 13069585 to 13070247 662 CpG island CpG island 17164
Tssr54950 6 13069750 to 13069755 5 + TSS region transcription start site region 54950
Tssr54951 6 13069758 to 13069866 108 + TSS region transcription start site region 54951
Tmem106b 6 13069759 to 13089269 19510 + protein coding gene transmembrane protein 106B
Tssr54952 6 13069879 to 13069895 16 + TSS region transcription start site region 54952