Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:126839596-127130325

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sluc3 6 104503360 to 127042975 22539615 QTL susceptibility to lung cancer 3
Ndufa9 6 126821863 to 126849144 27281 - protein coding gene NADH:ubiquinone oxidoreductase subunit A9
Tssr63345 6 126840841 to 126840845 4 - TSS region transcription start site region 63345
Cpgi18027 6 126848658 to 126849241 583 CpG island CpG island 18027
Tssr63346 6 126849109 to 126849141 32 - TSS region transcription start site region 63346
Tssr63347 6 126849147 to 126849149 2 - TSS region transcription start site region 63347
Tssr59010 6 126853091 to 126853116 25 + TSS region transcription start site region 59010
Akap3 6 126853098 to 126874308 21210 + protein coding gene A kinase (PRKA) anchor protein 3
Tssr2023 6 126853123 to 126853128 5 + TSS region transcription start site region 2023
Tssr59011 6 126853139 to 126853154 15 + TSS region transcription start site region 59011
Tssr63348 6 126854249 to 126854269 20 - TSS region transcription start site region 63348
Tssr59012 6 126854372 to 126854383 11 + TSS region transcription start site region 59012
Tssr59013 6 126854398 to 126854403 5 + TSS region transcription start site region 59013
Dyrk4 6 126876020 to 126921839 45819 - protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
Tssr63349 6 126877297 to 126877330 33 - TSS region transcription start site region 63349
Tssr63350 6 126921791 to 126921801 10 - TSS region transcription start site region 63350
Tssr63351 6 126921804 to 126921827 23 - TSS region transcription start site region 63351
Tssr59014 6 126921920 to 126921958 38 + TSS region transcription start site region 59014
Rad51ap1 6 126923415 to 126939701 16286 - protein coding gene RAD51 associated protein 1
Gm17808 6 126931688 to 126932581 893 + pseudogene predicted gene, 17808
Cpgi18028 6 126939035 to 126939803 768 CpG island CpG island 18028
Tssr63352 6 126939524 to 126939604 80 - TSS region transcription start site region 63352
Tssr59015 6 126939957 to 126939988 31 + TSS region transcription start site region 59015
D6Wsu163e 6 126939966 to 126975704 35738 + protein coding gene DNA segment, Chr 6, Wayne State University 163, expressed
Tssr59016 6 126939993 to 126940004 11 + TSS region transcription start site region 59016
Tssr63353 6 126966782 to 126966794 12 - TSS region transcription start site region 63353
Gm43125 6 126984596 to 126985325 729 - pseudogene predicted gene 43125
Tssr59017 6 126990540 to 126990585 45 + TSS region transcription start site region 59017
Gm43124 6 126990596 to 126990873 277 + pseudogene predicted gene 43124
Fgf6 6 127015542 to 127024718 9176 + protein coding gene fibroblast growth factor 6
Cpgi18029 6 127015610 to 127015848 238 CpG island CpG island 18029
D6Uwa1 6 127026058 to 127026259 201 DNA segment DNA segment, Chr 6, University of Western Australia 1
D6Mit218 6 127042856 to 127042975 119 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 218
Tssr59018 6 127072902 to 127072910 8 + TSS region transcription start site region 59018
Fgf23 6 127072902 to 127081408 8506 + protein coding gene fibroblast growth factor 23
Cpgi18030 6 127079850 to 127080713 863 CpG island CpG island 18030
Cpgi18031 6 127084852 to 127085119 267 CpG island CpG island 18031
Tigar 6 127085116 to 127109552 24436 - protein coding gene Trp53 induced glycolysis repulatory phosphatase
Platr31 6 127100297 to 127110467 10170 + antisense lncRNA gene pluripotency associated transcript 31
Cpgi18032 6 127109176 to 127109875 699 CpG island CpG island 18032
Tssr63354 6 127109496 to 127109507 11 - TSS region transcription start site region 63354
Tssr63355 6 127109517 to 127109569 52 - TSS region transcription start site region 63355
Gm43126 6 127122966 to 127126155 3189 + antisense lncRNA gene predicted gene 43126
Ccnd2 6 127125162 to 127152188 27026 - protein coding gene cyclin D2
Tssr63356 6 127125514 to 127125532 18 - TSS region transcription start site region 63356
Tssr63357 6 127125630 to 127125641 11 - TSS region transcription start site region 63357
Tssr63358 6 127125801 to 127125818 17 - TSS region transcription start site region 63358
Tssr63359 6 127125825 to 127125842 17 - TSS region transcription start site region 63359
Tssr63360 6 127128754 to 127128766 12 - TSS region transcription start site region 63360
Tssr63361 6 127128820 to 127128833 13 - TSS region transcription start site region 63361
Tssr63362 6 127129172 to 127129183 11 - TSS region transcription start site region 63362
Tssr63363 6 127129289 to 127129318 29 - TSS region transcription start site region 63363
Tssr63364 6 127130181 to 127130203 22 - TSS region transcription start site region 63364
Tssr59019 6 127130228 to 127130241 13 + TSS region transcription start site region 59019
Tssr63365 6 127130280 to 127130311 31 - TSS region transcription start site region 63365