Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:126375514-126695532

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D6Tem4 6 126380344 to 126380507 163 DNA segment DNA segment, Chr 6, Temple 4
Gm38899 6 126486460 to 126514874 28414 - lncRNA gene predicted gene, 38899
Kcna5 6 126532551 to 126535412 2861 - protein coding gene potassium voltage-gated channel, shaker-related subfamily, member 5
Cpgi18019 6 126534344 to 126535372 1028 CpG island CpG island 18019
Tssr63322 6 126534997 to 126535034 37 - TSS region transcription start site region 63322
Tssr63323 6 126535264 to 126535277 13 - TSS region transcription start site region 63323
Tssr63324 6 126535365 to 126535376 11 - TSS region transcription start site region 63324
Tssr63325 6 126535386 to 126535413 27 - TSS region transcription start site region 63325
Tssr63326 6 126535424 to 126535452 28 - TSS region transcription start site region 63326
Tssr63327 6 126535514 to 126535532 18 - TSS region transcription start site region 63327
Gm45869 6 126549869 to 126556169 6300 - lincRNA gene predicted gene 45869
Gm33320 6 126554387 to 126554916 529 - lncRNA gene predicted gene, 33320
D6Tem1 6 126566368 to 126566526 158 DNA segment DNA segment, Chr 6, Temple 1
Gm33449 6 126567995 to 126584290 16295 - lncRNA gene predicted gene, 33449
Gm33496 6 126598682 to 126610836 12154 + lncRNA gene predicted gene, 33496
Tssr63328 6 126638622 to 126638669 47 - TSS region transcription start site region 63328
Tssr63329 6 126640060 to 126640062 2 - TSS region transcription start site region 63329
Kcna1 6 126640397 to 126646384 5987 - protein coding gene potassium voltage-gated channel, shaker-related subfamily, member 1
Tssr63330 6 126641716 to 126641730 14 - TSS region transcription start site region 63330
Tssr63331 6 126642086 to 126642098 12 - TSS region transcription start site region 63331
Cpgi18020 6 126642114 to 126642434 320 CpG island CpG island 18020
Cpgi18021 6 126642732 to 126643417 685 CpG island CpG island 18021
Cpgi18022 6 126643708 to 126645960 2252 CpG island CpG island 18022
Tssr63332 6 126644575 to 126644591 16 - TSS region transcription start site region 63332
Tssr63333 6 126644734 to 126644772 38 - TSS region transcription start site region 63333
Tssr63334 6 126644789 to 126644805 16 - TSS region transcription start site region 63334
Tssr63335 6 126644807 to 126644827 20 - TSS region transcription start site region 63335
Tssr63336 6 126644833 to 126644844 11 - TSS region transcription start site region 63336
Tssr63337 6 126645153 to 126645172 19 - TSS region transcription start site region 63337
Tssr63338 6 126645784 to 126645800 16 - TSS region transcription start site region 63338
D6Tem3 6 126646260 to 126646409 149 DNA segment DNA segment, Chr 6, Temple 3
D6Tem2 6 126685809 to 126686123 314 DNA segment DNA segment, Chr 6, Temple 2