MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:12584153-12914167

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Thsd7a	6	12311608 to 12749253	437645	-	protein coding gene	thrombospondin, type I, domain containing 7A
D6Mit169	6	12589175 to 12589373	198		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 169
Gm44129	6	12608996 to 12658956	49960	+	lincRNA gene	predicted gene, 44129
Tssr59825	6	12706778 to 12706780	2	-	TSS region	transcription start site region 59825
Tssr59826	6	12724614 to 12724618	4	-	TSS region	transcription start site region 59826
Tssr59827	6	12726180 to 12726199	19	-	TSS region	transcription start site region 59827
n-R5s160	6	12742899 to 12743018	119	+	rRNA gene	nuclear encoded rRNA 5S 160
Cpgi17163	6	12748690 to 12749551	861		CpG island	CpG island 17163
Tssr59828	6	12749070 to 12749079	9	-	TSS region	transcription start site region 59828
Tssr59829	6	12749084 to 12749095	11	-	TSS region	transcription start site region 59829
Tssr59830	6	12749153 to 12749167	14	-	TSS region	transcription start site region 59830
Tssr1780	6	12749185 to 12749190	5	-	TSS region	transcription start site region 1780
Tssr59831	6	12749193 to 12749209	16	-	TSS region	transcription start site region 59831
Tssr59832	6	12749435 to 12749440	5	-	TSS region	transcription start site region 59832
Tssr59833	6	12786654 to 12786666	12	-	TSS region	transcription start site region 59833
Gm18221	6	12809066 to 12874600	65534	-	pseudogene	predicted gene, 18221
Gm15529	6	12857397 to 12858390	993	+	pseudogene	predicted gene 15529
Tssr54949	6	12911081 to 12911085	4	+	TSS region	transcription start site region 54949