Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 6:125236062-125336075

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59 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
E130112N10Rik 6 125231269 to 125239934 8665 + lncRNA gene RIKEN cDNA E130112N10 gene
Cd27 6 125232622 to 125237010 4388 - protein coding gene CD27 antigen
Tssr58939 6 125236104 to 125236110 6 + TSS region transcription start site region 58939
Tssr63271 6 125236838 to 125236854 16 - TSS region transcription start site region 63271
Tssr63272 6 125236923 to 125236934 11 - TSS region transcription start site region 63272
Tssr63273 6 125236954 to 125236971 17 - TSS region transcription start site region 63273
Tssr63274 6 125236974 to 125236993 19 - TSS region transcription start site region 63274
Tssr63275 6 125236996 to 125237025 29 - TSS region transcription start site region 63275
Tssr2017 6 125237094 to 125237101 7 - TSS region transcription start site region 2017
Tssr58940 6 125237749 to 125237770 21 + TSS region transcription start site region 58940
Tssr63276 6 125241667 to 125241673 6 - TSS region transcription start site region 63276
Tssr58941 6 125241900 to 125241921 21 + TSS region transcription start site region 58941
Tssr58942 6 125241953 to 125241976 23 + TSS region transcription start site region 58942
Tssr63277 6 125254054 to 125254102 48 - TSS region transcription start site region 63277
Tssr63278 6 125254184 to 125254258 74 - TSS region transcription start site region 63278
Gm44259 6 125257711 to 125258008 297 - pseudogene predicted gene, 44259
Gm24175 6 125258049 to 125258177 128 - snoRNA gene predicted gene, 24175
Tssr63279 6 125265327 to 125265342 15 - TSS region transcription start site region 63279
Tssr63280 6 125265346 to 125265354 8 - TSS region transcription start site region 63280
Tssr58943 6 125265470 to 125265481 11 + TSS region transcription start site region 58943
Tssr58944 6 125265513 to 125265530 17 + TSS region transcription start site region 58944
4930417O13Rik 6 125265525 to 125273777 8252 + lncRNA gene RIKEN cDNA 4930417O13 gene
Tssr58945 6 125265538 to 125265545 7 + TSS region transcription start site region 58945
Tssr58946 6 125265558 to 125265585 27 + TSS region transcription start site region 58946
Tssr58947 6 125265587 to 125265598 11 + TSS region transcription start site region 58947
Tssr63281 6 125266105 to 125266147 42 - TSS region transcription start site region 63281
Tssr58948 6 125266240 to 125266252 12 + TSS region transcription start site region 58948
Tssr58949 6 125266263 to 125266283 20 + TSS region transcription start site region 58949
Tssr63282 6 125266462 to 125266471 9 - TSS region transcription start site region 63282
Tssr63283 6 125275940 to 125275943 3 - TSS region transcription start site region 63283
Tuba3a 6 125278274 to 125286042 7768 - protein coding gene tubulin, alpha 3A
Cpgi18000 6 125285765 to 125286421 656 CpG island CpG island 18000
Tssr63284 6 125286015 to 125286050 35 - TSS region transcription start site region 63284
Tssr63285 6 125286062 to 125286075 13 - TSS region transcription start site region 63285
Ltbr 6 125306571 to 125313885 7314 - protein coding gene lymphotoxin B receptor
D6Mit134 6 125308619 to 125308746 127 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 134
Tssr63286 6 125308768 to 125308782 14 - TSS region transcription start site region 63286
Tssr58950 6 125309688 to 125309724 36 + TSS region transcription start site region 58950
Tssr63287 6 125313054 to 125313083 29 - TSS region transcription start site region 63287
Cpgi18001 6 125313649 to 125314188 539 CpG island CpG island 18001
Tssr63288 6 125313698 to 125313723 25 - TSS region transcription start site region 63288
Tssr63289 6 125313796 to 125313805 9 - TSS region transcription start site region 63289
Tssr63290 6 125313825 to 125313836 11 - TSS region transcription start site region 63290
Tssr63291 6 125313844 to 125313878 34 - TSS region transcription start site region 63291
Tssr58951 6 125314001 to 125314054 53 + TSS region transcription start site region 58951
D6Mit217 6 125318823 to 125319007 184 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 217
Tssr58952 6 125320633 to 125320639 6 + TSS region transcription start site region 58952
Scnn1a 6 125320659 to 125344943 24284 + protein coding gene sodium channel, nonvoltage-gated 1 alpha
Tssr58953 6 125321223 to 125321237 14 + TSS region transcription start site region 58953
Tssr58954 6 125321258 to 125321273 15 + TSS region transcription start site region 58954
Tssr58955 6 125321333 to 125321360 27 + TSS region transcription start site region 58955
Tssr58956 6 125321390 to 125321406 16 + TSS region transcription start site region 58956
Tssr58957 6 125321409 to 125321420 11 + TSS region transcription start site region 58957
Cpgi18002 6 125321559 to 125322322 763 CpG island CpG island 18002
Tssr2018 6 125321812 to 125321833 21 + TSS region transcription start site region 2018
Tssr58958 6 125321858 to 125321869 11 + TSS region transcription start site region 58958
Tssr58959 6 125322879 to 125322892 13 + TSS region transcription start site region 58959
Tssr58960 6 125322906 to 125322913 7 + TSS region transcription start site region 58960
Cpgi18003 6 125330927 to 125331305 378 CpG island CpG island 18003