Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:124870091-124970121

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd4 6 124864692 to 124888221 23529 - protein coding gene CD4 antigen
Tssr63206 6 124870521 to 124870529 8 - TSS region transcription start site region 63206
Tssr63207 6 124888165 to 124888181 16 - TSS region transcription start site region 63207
Tssr63208 6 124888192 to 124888217 25 - TSS region transcription start site region 63208
Cpgi17979 6 124903730 to 124903988 258 CpG island CpG island 17979
Lag3 6 124904361 to 124911705 7344 - protein coding gene lymphocyte-activation gene 3
Tssr63209 6 124905093 to 124905108 15 - TSS region transcription start site region 63209
Cpgi17980 6 124909822 to 124910608 786 CpG island CpG island 17980
Tssr63210 6 124911623 to 124911628 5 - TSS region transcription start site region 63210
Tssr63211 6 124911636 to 124911676 40 - TSS region transcription start site region 63211
Tssr63212 6 124911680 to 124911699 19 - TSS region transcription start site region 63212
Tssr63213 6 124911745 to 124911758 13 - TSS region transcription start site region 63213
Ptms 6 124913675 to 124917946 4271 - protein coding gene parathymosin
Tssr58857 6 124913676 to 124913696 20 + TSS region transcription start site region 58857
Tssr63214 6 124913858 to 124913886 28 - TSS region transcription start site region 63214
Tssr63215 6 124913945 to 124913955 10 - TSS region transcription start site region 63215
Tssr63216 6 124913969 to 124913994 25 - TSS region transcription start site region 63216
Tssr63217 6 124914006 to 124914021 15 - TSS region transcription start site region 63217
Tssr63218 6 124914035 to 124914044 9 - TSS region transcription start site region 63218
Tssr63219 6 124914053 to 124914057 4 - TSS region transcription start site region 63219
Tssr63220 6 124914061 to 124914065 4 - TSS region transcription start site region 63220
Tssr63221 6 124914091 to 124914107 16 - TSS region transcription start site region 63221
Tssr58858 6 124914105 to 124914127 22 + TSS region transcription start site region 58858
Tssr63222 6 124914111 to 124914130 19 - TSS region transcription start site region 63222
Tssr58859 6 124914146 to 124914163 17 + TSS region transcription start site region 58859
Tssr58860 6 124914178 to 124914211 33 + TSS region transcription start site region 58860
Tssr63223 6 124914186 to 124914199 13 - TSS region transcription start site region 63223
Tssr63224 6 124914206 to 124914213 7 - TSS region transcription start site region 63224
Tssr63225 6 124914222 to 124914234 12 - TSS region transcription start site region 63225
Tssr58861 6 124914395 to 124914434 39 + TSS region transcription start site region 58861
Tssr63226 6 124914436 to 124914458 22 - TSS region transcription start site region 63226
Tssr58862 6 124914626 to 124914669 43 + TSS region transcription start site region 58862
Tssr58863 6 124914670 to 124914686 16 + TSS region transcription start site region 58863
Tssr63227 6 124914676 to 124914694 18 - TSS region transcription start site region 63227
Tssr58864 6 124914904 to 124914928 24 + TSS region transcription start site region 58864
Tssr63228 6 124914939 to 124914975 36 - TSS region transcription start site region 63228
Cpgi17981 6 124915461 to 124915676 215 CpG island CpG island 17981
Tssr63229 6 124915572 to 124915615 43 - TSS region transcription start site region 63229
A230083G16Rik 6 124916863 to 124925753 8890 + antisense lncRNA gene RIKEN cDNA A230083G16 gene
Cpgi17982 6 124916936 to 124918459 1523 CpG island CpG island 17982
Tssr63230 6 124917756 to 124917762 6 - TSS region transcription start site region 63230
Tssr2013 6 124917895 to 124917899 4 - TSS region transcription start site region 2013
Tssr63231 6 124917939 to 124917955 16 - TSS region transcription start site region 63231
Gm38896 6 124920036 to 124920738 702 + lncRNA gene predicted gene, 38896
Tssr63232 6 124920091 to 124920121 30 - TSS region transcription start site region 63232
Cpgi17983 6 124930839 to 124932430 1591 CpG island CpG island 17983
Tssr58865 6 124931378 to 124931425 47 + TSS region transcription start site region 58865
Mlf2 6 124931388 to 124936149 4761 + protein coding gene myeloid leukemia factor 2
Tssr58866 6 124931426 to 124931451 25 + TSS region transcription start site region 58866
Tssr58867 6 124931499 to 124931539 40 + TSS region transcription start site region 58867
Tssr58868 6 124934303 to 124934333 30 + TSS region transcription start site region 58868
Tssr58869 6 124935330 to 124935357 27 + TSS region transcription start site region 58869
Tssr58870 6 124935370 to 124935394 24 + TSS region transcription start site region 58870
Tssr58871 6 124935619 to 124935646 27 + TSS region transcription start site region 58871
Tssr58872 6 124935737 to 124935762 25 + TSS region transcription start site region 58872
Tssr58873 6 124935779 to 124935800 21 + TSS region transcription start site region 58873
Tssr58874 6 124939302 to 124939319 17 + TSS region transcription start site region 58874
Gm32536 6 124951321 to 124951765 444 - pseudogene predicted gene, 32536
Cops7a 6 124958411 to 124965529 7118 - protein coding gene COP9 signalosome subunit 7A
Tssr63233 6 124959464 to 124959578 114 - TSS region transcription start site region 63233
Tssr63234 6 124962425 to 124962438 13 - TSS region transcription start site region 63234
Gm23851 6 124964285 to 124964387 102 + snRNA gene predicted gene, 23851
Cpgi17984 6 124964800 to 124965993 1193 CpG island CpG island 17984
Tssr63235 6 124965231 to 124965243 12 - TSS region transcription start site region 63235
Tssr63236 6 124965248 to 124965275 27 - TSS region transcription start site region 63236
Tssr63237 6 124965403 to 124965458 55 - TSS region transcription start site region 63237
Tssr63238 6 124965469 to 124965483 14 - TSS region transcription start site region 63238
Tssr63239 6 124965485 to 124965543 58 - TSS region transcription start site region 63239
Tssr58875 6 124965578 to 124965590 12 + TSS region transcription start site region 58875
Tssr58876 6 124965620 to 124965633 13 + TSS region transcription start site region 58876