Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:124782687-124932705

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125 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38895 6 124789334 to 124790310 976 + lncRNA gene predicted gene, 38895
Gm38894 6 124789734 to 124797093 7359 - lncRNA gene predicted gene, 38894
Cpgi17970 6 124805521 to 124805879 358 CpG island CpG island 17970
Tssr63166 6 124805717 to 124805745 28 - TSS region transcription start site region 63166
Tssr58845 6 124805816 to 124805854 38 + TSS region transcription start site region 58845
Tssr58846 6 124808658 to 124808704 46 + TSS region transcription start site region 58846
Spsb2 6 124808661 to 124810619 1958 + protein coding gene splA/ryanodine receptor domain and SOCS box containing 2
Cpgi17971 6 124808675 to 124809874 1199 CpG island CpG island 17971
Tssr58847 6 124808898 to 124808933 35 + TSS region transcription start site region 58847
Tssr58848 6 124808936 to 124808956 20 + TSS region transcription start site region 58848
Tssr58849 6 124809724 to 124809760 36 + TSS region transcription start site region 58849
Tpi1 6 124810592 to 124814296 3704 - protein coding gene triosephosphate isomerase 1
Tssr63167 6 124812482 to 124812503 21 - TSS region transcription start site region 63167
Tssr63168 6 124812890 to 124812916 26 - TSS region transcription start site region 63168
Tssr63169 6 124812963 to 124813033 70 - TSS region transcription start site region 63169
Tssr63170 6 124813045 to 124813057 12 - TSS region transcription start site region 63170
Tssr63171 6 124813065 to 124813092 27 - TSS region transcription start site region 63171
Tssr63172 6 124813095 to 124813111 16 - TSS region transcription start site region 63172
Cpgi17972 6 124813467 to 124813780 313 CpG island CpG island 17972
Tssr63173 6 124814151 to 124814168 17 - TSS region transcription start site region 63173
Tssr63174 6 124814269 to 124814278 9 - TSS region transcription start site region 63174
Tssr63175 6 124814288 to 124814296 8 - TSS region transcription start site region 63175
Tssr63176 6 124814297 to 124814310 13 - TSS region transcription start site region 63176
Usp5 6 124815019 to 124829484 14465 - protein coding gene ubiquitin specific peptidase 5 (isopeptidase T)
Tssr2011 6 124817997 to 124818007 10 - TSS region transcription start site region 2011
Tssr63177 6 124818011 to 124818021 10 - TSS region transcription start site region 63177
Tssr63178 6 124818039 to 124818054 15 - TSS region transcription start site region 63178
Tssr63179 6 124819436 to 124819453 17 - TSS region transcription start site region 63179
Tssr63180 6 124828313 to 124828343 30 - TSS region transcription start site region 63180
Cpgi17973 6 124828924 to 124829654 730 CpG island CpG island 17973
Tssr63181 6 124829398 to 124829452 54 - TSS region transcription start site region 63181
Tssr63182 6 124829467 to 124829478 11 - TSS region transcription start site region 63182
Tssr58850 6 124829494 to 124829513 19 + TSS region transcription start site region 58850
Tssr58851 6 124829516 to 124829539 23 + TSS region transcription start site region 58851
Tssr58852 6 124829540 to 124829577 37 + TSS region transcription start site region 58852
Cdca3 6 124829547 to 124833701 4154 + protein coding gene cell division cycle associated 3
Tssr58853 6 124829582 to 124829587 5 + TSS region transcription start site region 58853
Tssr58854 6 124830193 to 124830209 16 + TSS region transcription start site region 58854
Tssr58855 6 124830218 to 124830251 33 + TSS region transcription start site region 58855
Cpgi17974 6 124830261 to 124830627 366 CpG island CpG island 17974
Gnb3 6 124834240 to 124840275 6035 - protein coding gene guanine nucleotide binding protein (G protein), beta 3
Tssr63183 6 124839967 to 124840016 49 - TSS region transcription start site region 63183
Tssr63184 6 124840041 to 124840052 11 - TSS region transcription start site region 63184
Tssr63185 6 124840058 to 124840069 11 - TSS region transcription start site region 63185
Tssr63186 6 124840183 to 124840186 3 - TSS region transcription start site region 63186
Tssr63187 6 124840192 to 124840205 13 - TSS region transcription start site region 63187
P3h3 6 124841095 to 124857687 16592 - protein coding gene prolyl 3-hydroxylase 3
Cpgi17975 6 124856942 to 124858288 1346 CpG island CpG island 17975
Tssr58856 6 124857140 to 124857165 25 + TSS region transcription start site region 58856
Tssr63188 6 124857687 to 124857705 18 - TSS region transcription start site region 63188
Tssr63189 6 124857707 to 124857755 48 - TSS region transcription start site region 63189
Gm32404 6 124857807 to 124858428 621 + lncRNA gene predicted gene, 32404
Gpr162 6 124858444 to 124863983 5539 - protein coding gene G protein-coupled receptor 162
Gm46975 6 124859144 to 124859997 853 + lncRNA gene predicted gene, 46975
Cpgi17976 6 124859879 to 124860170 291 CpG island CpG island 17976
Cpgi17977 6 124861109 to 124861436 327 CpG island CpG island 17977
Tssr63190 6 124863050 to 124863061 11 - TSS region transcription start site region 63190
Cpgi17978 6 124863451 to 124864168 717 CpG island CpG island 17978
Tssr63191 6 124863698 to 124863724 26 - TSS region transcription start site region 63191
Tssr63192 6 124863725 to 124863771 46 - TSS region transcription start site region 63192
Tssr63193 6 124863877 to 124863996 119 - TSS region transcription start site region 63193
Tssr63194 6 124864082 to 124864093 11 - TSS region transcription start site region 63194
Tssr63195 6 124864123 to 124864149 26 - TSS region transcription start site region 63195
Tssr63196 6 124864151 to 124864165 14 - TSS region transcription start site region 63196
Cd4 6 124864692 to 124888221 23529 - protein coding gene CD4 antigen
Tssr63197 6 124864919 to 124864934 15 - TSS region transcription start site region 63197
D6Mit24 6 124865122 to 124865236 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 24
Tssr63198 6 124865248 to 124865256 8 - TSS region transcription start site region 63198
Tssr63199 6 124865299 to 124865308 9 - TSS region transcription start site region 63199
Tssr63200 6 124865542 to 124865551 9 - TSS region transcription start site region 63200
Tssr63201 6 124865613 to 124865622 9 - TSS region transcription start site region 63201
Tssr2012 6 124865696 to 124865701 5 - TSS region transcription start site region 2012
Tssr63202 6 124865717 to 124865726 9 - TSS region transcription start site region 63202
Tssr63203 6 124865765 to 124865781 16 - TSS region transcription start site region 63203
Tssr63204 6 124865793 to 124865804 11 - TSS region transcription start site region 63204
Tssr63205 6 124865828 to 124865837 9 - TSS region transcription start site region 63205
Tssr63206 6 124870521 to 124870529 8 - TSS region transcription start site region 63206
Tssr63207 6 124888165 to 124888181 16 - TSS region transcription start site region 63207
Tssr63208 6 124888192 to 124888217 25 - TSS region transcription start site region 63208
Cpgi17979 6 124903730 to 124903988 258 CpG island CpG island 17979
Lag3 6 124904361 to 124911705 7344 - protein coding gene lymphocyte-activation gene 3
Tssr63209 6 124905093 to 124905108 15 - TSS region transcription start site region 63209
Cpgi17980 6 124909822 to 124910608 786 CpG island CpG island 17980
Tssr63210 6 124911623 to 124911628 5 - TSS region transcription start site region 63210
Tssr63211 6 124911636 to 124911676 40 - TSS region transcription start site region 63211
Tssr63212 6 124911680 to 124911699 19 - TSS region transcription start site region 63212
Tssr63213 6 124911745 to 124911758 13 - TSS region transcription start site region 63213
Ptms 6 124913675 to 124917946 4271 - protein coding gene parathymosin
Tssr58857 6 124913676 to 124913696 20 + TSS region transcription start site region 58857
Tssr63214 6 124913858 to 124913886 28 - TSS region transcription start site region 63214
Tssr63215 6 124913945 to 124913955 10 - TSS region transcription start site region 63215
Tssr63216 6 124913969 to 124913994 25 - TSS region transcription start site region 63216
Tssr63217 6 124914006 to 124914021 15 - TSS region transcription start site region 63217
Tssr63218 6 124914035 to 124914044 9 - TSS region transcription start site region 63218
Tssr63219 6 124914053 to 124914057 4 - TSS region transcription start site region 63219
Tssr63220 6 124914061 to 124914065 4 - TSS region transcription start site region 63220
Tssr63221 6 124914091 to 124914107 16 - TSS region transcription start site region 63221
Tssr58858 6 124914105 to 124914127 22 + TSS region transcription start site region 58858
Tssr63222 6 124914111 to 124914130 19 - TSS region transcription start site region 63222
Tssr58859 6 124914146 to 124914163 17 + TSS region transcription start site region 58859
Tssr58860 6 124914178 to 124914211 33 + TSS region transcription start site region 58860
Tssr63223 6 124914186 to 124914199 13 - TSS region transcription start site region 63223
Tssr63224 6 124914206 to 124914213 7 - TSS region transcription start site region 63224
Tssr63225 6 124914222 to 124914234 12 - TSS region transcription start site region 63225
Tssr58861 6 124914395 to 124914434 39 + TSS region transcription start site region 58861
Tssr63226 6 124914436 to 124914458 22 - TSS region transcription start site region 63226
Tssr58862 6 124914626 to 124914669 43 + TSS region transcription start site region 58862
Tssr58863 6 124914670 to 124914686 16 + TSS region transcription start site region 58863
Tssr63227 6 124914676 to 124914694 18 - TSS region transcription start site region 63227
Tssr58864 6 124914904 to 124914928 24 + TSS region transcription start site region 58864
Tssr63228 6 124914939 to 124914975 36 - TSS region transcription start site region 63228
Cpgi17981 6 124915461 to 124915676 215 CpG island CpG island 17981
Tssr63229 6 124915572 to 124915615 43 - TSS region transcription start site region 63229
A230083G16Rik 6 124916863 to 124925753 8890 + antisense lncRNA gene RIKEN cDNA A230083G16 gene
Cpgi17982 6 124916936 to 124918459 1523 CpG island CpG island 17982
Tssr63230 6 124917756 to 124917762 6 - TSS region transcription start site region 63230
Tssr2013 6 124917895 to 124917899 4 - TSS region transcription start site region 2013
Tssr63231 6 124917939 to 124917955 16 - TSS region transcription start site region 63231
Gm38896 6 124920036 to 124920738 702 + lncRNA gene predicted gene, 38896
Tssr63232 6 124920091 to 124920121 30 - TSS region transcription start site region 63232
Cpgi17983 6 124930839 to 124932430 1591 CpG island CpG island 17983
Tssr58865 6 124931378 to 124931425 47 + TSS region transcription start site region 58865
Mlf2 6 124931388 to 124936149 4761 + protein coding gene myeloid leukemia factor 2
Tssr58866 6 124931426 to 124931451 25 + TSS region transcription start site region 58866
Tssr58867 6 124931499 to 124931539 40 + TSS region transcription start site region 58867