Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 6:124656849-124856883

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180 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lpcat3 6 124639990 to 124681381 41391 + protein coding gene lysophosphatidylcholine acyltransferase 3
Tssr58837 6 124678476 to 124678490 14 + TSS region transcription start site region 58837
Tssr58838 6 124678586 to 124678600 14 + TSS region transcription start site region 58838
Emg1 6 124681333 to 124689151 7818 - protein coding gene EMG1 N1-specific pseudouridine methyltransferase
Tssr63098 6 124686015 to 124686020 5 - TSS region transcription start site region 63098
Cpgi17963 6 124688863 to 124689897 1034 CpG island CpG island 17963
Tssr63099 6 124689001 to 124689034 33 - TSS region transcription start site region 63099
Tssr63100 6 124689094 to 124689134 40 - TSS region transcription start site region 63100
Tssr58839 6 124689242 to 124689316 74 + TSS region transcription start site region 58839
Phb2 6 124689299 to 124693913 4614 + protein coding gene prohibitin 2
Tssr58840 6 124690062 to 124690080 18 + TSS region transcription start site region 58840
Tssr58841 6 124690969 to 124690994 25 + TSS region transcription start site region 58841
Tssr58842 6 124692193 to 124692196 3 + TSS region transcription start site region 58842
Gm23547 6 124692195 to 124692465 270 + snoRNA gene predicted gene, 23547
Gm15884 6 124692536 to 124695794 3258 - lncRNA gene predicted gene 15884
Gm29008 6 124694610 to 124694907 297 - sense intronic lncRNA gene predicted gene 29008
Mir141 6 124694877 to 124694948 71 - miRNA gene microRNA 141
Mirc13 6 124694877 to 124695353 476 complex/cluster/region microRNA cluster 13, including Mir141 through Mir200c
Mir200c 6 124695285 to 124695353 68 - miRNA gene microRNA 200c
Cpgi17964 6 124695606 to 124695785 179 CpG island CpG island 17964
Tssr63101 6 124695771 to 124695798 27 - TSS region transcription start site region 63101
Tssr63102 6 124695800 to 124695820 20 - TSS region transcription start site region 63102
Ptpn6 6 124697670 to 124715672 18002 - protein coding gene protein tyrosine phosphatase, non-receptor type 6
Tssr63103 6 124698869 to 124698880 11 - TSS region transcription start site region 63103
Tssr2008 6 124699082 to 124699098 16 - TSS region transcription start site region 2008
Tssr2009 6 124699112 to 124699123 11 - TSS region transcription start site region 2009
2010010I01Rik 6 124699580 to 124700991 1411 + lncRNA gene RIKEN cDNA 2010010I01 gene
Tssr63104 6 124699964 to 124699966 2 - TSS region transcription start site region 63104
Tssr63105 6 124700577 to 124700617 40 - TSS region transcription start site region 63105
Tssr63106 6 124701553 to 124701567 14 - TSS region transcription start site region 63106
Tssr63107 6 124704076 to 124704087 11 - TSS region transcription start site region 63107
Tssr63108 6 124704175 to 124704179 4 - TSS region transcription start site region 63108
Tssr63109 6 124704237 to 124704250 13 - TSS region transcription start site region 63109
Tssr63110 6 124705408 to 124705417 9 - TSS region transcription start site region 63110
Tssr63111 6 124706902 to 124706917 15 - TSS region transcription start site region 63111
Tssr63112 6 124706943 to 124706954 11 - TSS region transcription start site region 63112
Gm20531 6 124709131 to 124715003 5872 + lncRNA gene predicted gene 20531
Tssr63113 6 124709349 to 124709396 47 - TSS region transcription start site region 63113
Tssr63114 6 124709984 to 124709995 11 - TSS region transcription start site region 63114
Tssr63115 6 124710030 to 124710083 53 - TSS region transcription start site region 63115
Tssr63116 6 124710084 to 124710108 24 - TSS region transcription start site region 63116
Tssr63117 6 124710139 to 124710150 11 - TSS region transcription start site region 63117
Tssr63118 6 124715542 to 124715554 12 - TSS region transcription start site region 63118
Tssr63119 6 124715559 to 124715593 34 - TSS region transcription start site region 63119
Tssr63120 6 124715616 to 124715641 25 - TSS region transcription start site region 63120
Tssr63121 6 124715757 to 124715789 32 - TSS region transcription start site region 63121
Tssr63122 6 124715813 to 124715840 27 - TSS region transcription start site region 63122
Grcc10 6 124716146 to 124718032 1886 - protein coding gene gene rich cluster, C10 gene
Tssr58843 6 124716147 to 124716195 48 + TSS region transcription start site region 58843
Gm45234 6 124716152 to 124732984 16832 - protein coding gene predicted gene 45234
Cpgi17965 6 124717442 to 124718251 809 CpG island CpG island 17965
Tssr63123 6 124717947 to 124718056 109 - TSS region transcription start site region 63123
Tssr63124 6 124718064 to 124718081 17 - TSS region transcription start site region 63124
Tssr63125 6 124718082 to 124718091 9 - TSS region transcription start site region 63125
Tssr63126 6 124718146 to 124718156 10 - TSS region transcription start site region 63126
Rnu7 6 124718188 to 124718249 61 - snRNA gene U7 small nuclear RNA
Tssr63127 6 124718241 to 124718252 11 - TSS region transcription start site region 63127
Tssr63128 6 124718341 to 124718365 24 - TSS region transcription start site region 63128
Atn1 6 124719507 to 124733450 13943 - protein coding gene atrophin 1
Tssr63129 6 124719606 to 124719633 27 - TSS region transcription start site region 63129
Tssr63130 6 124719638 to 124719692 54 - TSS region transcription start site region 63130
Tssr58844 6 124720485 to 124720488 3 + TSS region transcription start site region 58844
Cpgi17966 6 124721859 to 124723510 1651 CpG island CpG island 17966
Tssr63131 6 124722563 to 124722582 19 - TSS region transcription start site region 63131
Tssr63132 6 124723650 to 124723667 17 - TSS region transcription start site region 63132
Tssr63133 6 124723821 to 124723841 20 - TSS region transcription start site region 63133
Tssr63134 6 124723904 to 124723921 17 - TSS region transcription start site region 63134
Tssr63135 6 124724086 to 124724126 40 - TSS region transcription start site region 63135
Tssr63136 6 124724155 to 124724183 28 - TSS region transcription start site region 63136
Tssr63137 6 124724365 to 124724391 26 - TSS region transcription start site region 63137
Tssr63138 6 124724932 to 124724957 25 - TSS region transcription start site region 63138
Tssr63139 6 124726466 to 124726485 19 - TSS region transcription start site region 63139
Tssr63140 6 124730977 to 124730980 3 - TSS region transcription start site region 63140
Cpgi17967 6 124732733 to 124734470 1737 CpG island CpG island 17967
Tssr63141 6 124733286 to 124733326 40 - TSS region transcription start site region 63141
Tssr63142 6 124733441 to 124733490 49 - TSS region transcription start site region 63142
Tssr63143 6 124733662 to 124733731 69 - TSS region transcription start site region 63143
Tssr63144 6 124733789 to 124733810 21 - TSS region transcription start site region 63144
Tssr63145 6 124733812 to 124733846 34 - TSS region transcription start site region 63145
Tssr63146 6 124733850 to 124733861 11 - TSS region transcription start site region 63146
Tssr63147 6 124733925 to 124733938 13 - TSS region transcription start site region 63147
Tssr63148 6 124733960 to 124733971 11 - TSS region transcription start site region 63148
Tssr63149 6 124733983 to 124733994 11 - TSS region transcription start site region 63149
Tssr63150 6 124734202 to 124734229 27 - TSS region transcription start site region 63150
Eno2 6 124737016 to 124746636 9620 - protein coding gene enolase 2, gamma neuronal
Tssr63151 6 124737470 to 124737485 15 - TSS region transcription start site region 63151
Tssr63152 6 124737788 to 124737803 15 - TSS region transcription start site region 63152
Tssr63153 6 124738246 to 124738256 10 - TSS region transcription start site region 63153
Tssr63154 6 124738298 to 124738310 12 - TSS region transcription start site region 63154
Tssr63155 6 124739685 to 124739699 14 - TSS region transcription start site region 63155
Cpgi17968 6 124739927 to 124740158 231 CpG island CpG island 17968
Tssr63156 6 124740028 to 124740039 11 - TSS region transcription start site region 63156
Tssr63157 6 124743094 to 124743112 18 - TSS region transcription start site region 63157
Tssr63158 6 124745293 to 124745343 50 - TSS region transcription start site region 63158
Cpgi17969 6 124745721 to 124746954 1233 CpG island CpG island 17969
Tssr63159 6 124746445 to 124746464 19 - TSS region transcription start site region 63159
Tssr63160 6 124746468 to 124746500 32 - TSS region transcription start site region 63160
Tssr63161 6 124746511 to 124746533 22 - TSS region transcription start site region 63161
Lrrc23 6 124746826 to 124756690 9864 - protein coding gene leucine rich repeat containing 23
Tssr63162 6 124756600 to 124756611 11 - TSS region transcription start site region 63162
Tssr2010 6 124756629 to 124756643 14 - TSS region transcription start site region 2010
Tssr63163 6 124756649 to 124756705 56 - TSS region transcription start site region 63163
Tssr63164 6 124756709 to 124756726 17 - TSS region transcription start site region 63164
Tssr63165 6 124757405 to 124757437 32 - TSS region transcription start site region 63165
Gm38895 6 124764248 to 124767273 3025 + lncRNA gene predicted gene, 38895
Gm38894 6 124766702 to 124774056 7354 - lncRNA gene predicted gene, 38894
Cpgi17970 6 124782484 to 124782842 358 CpG island CpG island 17970
Tssr63166 6 124782680 to 124782708 28 - TSS region transcription start site region 63166
Tssr58845 6 124782779 to 124782817 38 + TSS region transcription start site region 58845
Tssr58846 6 124785621 to 124785667 46 + TSS region transcription start site region 58846
Spsb2 6 124785624 to 124787582 1958 + protein coding gene splA/ryanodine receptor domain and SOCS box containing 2
Cpgi17971 6 124785638 to 124786837 1199 CpG island CpG island 17971
Tssr58847 6 124785861 to 124785896 35 + TSS region transcription start site region 58847
Tssr58848 6 124785899 to 124785919 20 + TSS region transcription start site region 58848
Tssr58849 6 124786687 to 124786723 36 + TSS region transcription start site region 58849
Tpi1 6 124787549 to 124791121 3572 - protein coding gene triosephosphate isomerase 1
Tssr63167 6 124789445 to 124789466 21 - TSS region transcription start site region 63167
Tssr63168 6 124789853 to 124789879 26 - TSS region transcription start site region 63168
Tssr63169 6 124789926 to 124789996 70 - TSS region transcription start site region 63169
Tssr63170 6 124790008 to 124790020 12 - TSS region transcription start site region 63170
Tssr63171 6 124790028 to 124790055 27 - TSS region transcription start site region 63171
Tssr63172 6 124790058 to 124790074 16 - TSS region transcription start site region 63172
Cpgi17972 6 124790430 to 124790743 313 CpG island CpG island 17972
Tssr63173 6 124791114 to 124791131 17 - TSS region transcription start site region 63173
Tssr63174 6 124791232 to 124791241 9 - TSS region transcription start site region 63174
Tssr63175 6 124791251 to 124791259 8 - TSS region transcription start site region 63175
Tssr63176 6 124791260 to 124791273 13 - TSS region transcription start site region 63176
Usp5 6 124791982 to 124806447 14465 - protein coding gene ubiquitin specific peptidase 5 (isopeptidase T)
Tssr2011 6 124794960 to 124794970 10 - TSS region transcription start site region 2011
Tssr63177 6 124794974 to 124794984 10 - TSS region transcription start site region 63177
Tssr63178 6 124795002 to 124795017 15 - TSS region transcription start site region 63178
Tssr63179 6 124796399 to 124796416 17 - TSS region transcription start site region 63179
Tssr63180 6 124805276 to 124805306 30 - TSS region transcription start site region 63180
Cpgi17973 6 124805887 to 124806617 730 CpG island CpG island 17973
Tssr63181 6 124806361 to 124806415 54 - TSS region transcription start site region 63181
Tssr63182 6 124806430 to 124806441 11 - TSS region transcription start site region 63182
Tssr58850 6 124806457 to 124806476 19 + TSS region transcription start site region 58850
Tssr58851 6 124806479 to 124806502 23 + TSS region transcription start site region 58851
Tssr58852 6 124806503 to 124806540 37 + TSS region transcription start site region 58852
Cdca3 6 124806533 to 124810664 4131 + protein coding gene cell division cycle associated 3
Tssr58853 6 124806545 to 124806550 5 + TSS region transcription start site region 58853
Tssr58854 6 124807156 to 124807172 16 + TSS region transcription start site region 58854
Tssr58855 6 124807181 to 124807214 33 + TSS region transcription start site region 58855
Cpgi17974 6 124807224 to 124807590 366 CpG island CpG island 17974
Gnb3 6 124811203 to 124817238 6035 - protein coding gene guanine nucleotide binding protein (G protein), beta 3
Tssr63183 6 124816930 to 124816979 49 - TSS region transcription start site region 63183
Tssr63184 6 124817004 to 124817015 11 - TSS region transcription start site region 63184
Tssr63185 6 124817021 to 124817032 11 - TSS region transcription start site region 63185
Tssr63186 6 124817146 to 124817149 3 - TSS region transcription start site region 63186
Tssr63187 6 124817155 to 124817168 13 - TSS region transcription start site region 63187
P3h3 6 124818052 to 124834680 16628 - protein coding gene prolyl 3-hydroxylase 3
Cpgi17975 6 124833905 to 124835251 1346 CpG island CpG island 17975
Tssr58856 6 124834103 to 124834128 25 + TSS region transcription start site region 58856
Tssr63188 6 124834650 to 124834668 18 - TSS region transcription start site region 63188
Tssr63189 6 124834670 to 124834718 48 - TSS region transcription start site region 63189
Gm32404 6 124834770 to 124837733 2963 + lncRNA gene predicted gene, 32404
Gpr162 6 124835407 to 124840946 5539 - protein coding gene G protein-coupled receptor 162
Cpgi17976 6 124836842 to 124837133 291 CpG island CpG island 17976
Cpgi17977 6 124838072 to 124838399 327 CpG island CpG island 17977
Tssr63190 6 124840013 to 124840024 11 - TSS region transcription start site region 63190
Cpgi17978 6 124840414 to 124841131 717 CpG island CpG island 17978
Tssr63191 6 124840661 to 124840687 26 - TSS region transcription start site region 63191
Tssr63192 6 124840688 to 124840734 46 - TSS region transcription start site region 63192
Tssr63193 6 124840840 to 124840959 119 - TSS region transcription start site region 63193
Tssr63194 6 124841045 to 124841056 11 - TSS region transcription start site region 63194
Tssr63195 6 124841086 to 124841112 26 - TSS region transcription start site region 63195
Tssr63196 6 124841114 to 124841128 14 - TSS region transcription start site region 63196
Cd4 6 124841655 to 124865184 23529 - protein coding gene CD4 antigen
Tssr63197 6 124841882 to 124841897 15 - TSS region transcription start site region 63197
D6Mit24 6 124842085 to 124842199 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 24
Tssr63198 6 124842211 to 124842219 8 - TSS region transcription start site region 63198
Tssr63199 6 124842262 to 124842271 9 - TSS region transcription start site region 63199
Tssr63200 6 124842505 to 124842514 9 - TSS region transcription start site region 63200
Tssr63201 6 124842576 to 124842585 9 - TSS region transcription start site region 63201
Tssr2012 6 124842659 to 124842664 5 - TSS region transcription start site region 2012
Tssr63202 6 124842680 to 124842689 9 - TSS region transcription start site region 63202
Tssr63203 6 124842728 to 124842744 16 - TSS region transcription start site region 63203
Tssr63204 6 124842756 to 124842767 11 - TSS region transcription start site region 63204
Tssr63205 6 124842791 to 124842800 9 - TSS region transcription start site region 63205
Tssr63206 6 124847484 to 124847492 8 - TSS region transcription start site region 63206