Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:124399772-124529783

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pex5 6 124396816 to 124415067 18251 - protein coding gene peroxisomal biogenesis factor 5
Cpgi17959 6 124414315 to 124415420 1105 CpG island CpG island 17959
Tssr63079 6 124415017 to 124415026 9 - TSS region transcription start site region 63079
Tssr63080 6 124415037 to 124415078 41 - TSS region transcription start site region 63080
D830015G05Rik 6 124415090 to 124423436 8346 + lncRNA gene RIKEN cDNA D830015G05 gene
Clstn3 6 124430756 to 124464784 34028 - protein coding gene calsyntenin 3
Tssr63081 6 124431601 to 124431610 9 - TSS region transcription start site region 63081
Tssr63082 6 124433433 to 124433438 5 - TSS region transcription start site region 63082
Tssr63083 6 124433469 to 124433485 16 - TSS region transcription start site region 63083
Tssr63084 6 124433490 to 124433515 25 - TSS region transcription start site region 63084
Tssr63085 6 124433522 to 124433534 12 - TSS region transcription start site region 63085
Tssr63086 6 124433749 to 124433778 29 - TSS region transcription start site region 63086
Tssr63087 6 124433779 to 124433801 22 - TSS region transcription start site region 63087
Tssr63088 6 124436374 to 124436395 21 - TSS region transcription start site region 63088
D6Mit331 6 124441054 to 124441148 94 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 331
Cpgi17960 6 124449434 to 124449861 427 CpG island CpG island 17960
Tssr63089 6 124450159 to 124450174 15 - TSS region transcription start site region 63089
Tssr63090 6 124450177 to 124450210 33 - TSS region transcription start site region 63090
Tssr63091 6 124464673 to 124464682 9 - TSS region transcription start site region 63091
Tssr63092 6 124464696 to 124464759 63 - TSS region transcription start site region 63092
Tssr63093 6 124464772 to 124464783 11 - TSS region transcription start site region 63093
D6Mit193.2 6 124467968 to 124468129 161 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 193.2
D6Mit193 6 124468113 to 124468231 118 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 193
Tssr58819 6 124474857 to 124474868 11 + TSS region transcription start site region 58819
Tssr58820 6 124476466 to 124476467 1 + TSS region transcription start site region 58820
Tssr58821 6 124477228 to 124477235 7 + TSS region transcription start site region 58821
Tssr58822 6 124480523 to 124480528 5 + TSS region transcription start site region 58822
Gm44096 6 124492163 to 124494368 2205 - antisense lncRNA gene predicted gene, 44096
Tssr58823 6 124493101 to 124493170 69 + TSS region transcription start site region 58823
C1rl 6 124493113 to 124510643 17530 + protein coding gene complement component 1, r subcomponent-like
Tssr58824 6 124493175 to 124493178 3 + TSS region transcription start site region 58824
Tssr63094 6 124496102 to 124496107 5 - TSS region transcription start site region 63094
Tssr2006 6 124505245 to 124505253 8 + TSS region transcription start site region 2006
Tssr58825 6 124512615 to 124512640 25 + TSS region transcription start site region 58825
C1ra 6 124512621 to 124523440 10819 + protein coding gene complement component 1, r subcomponent A
Tssr58826 6 124512644 to 124512668 24 + TSS region transcription start site region 58826
Tssr58827 6 124512713 to 124512735 22 + TSS region transcription start site region 58827
Tssr58828 6 124519964 to 124519979 15 + TSS region transcription start site region 58828
D6Mit336 6 124526698 to 124526820 122 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 336