Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:123991596-124431784

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn2r26 6 124024758 to 124062035 37277 + protein coding gene vomeronasal 2, receptor 26
Gm24843 6 124058539 to 124058614 75 - snoRNA gene predicted gene, 24843
Tssr58813 6 124065805 to 124065808 3 + TSS region transcription start site region 58813
Tssr58814 6 124068122 to 124068170 48 + TSS region transcription start site region 58814
Vmn2r-ps33 6 124081698 to 124082601 903 - pseudogene vomeronasal 2, receptor, pseudogene 33
Gm22916 6 124095450 to 124095568 118 + snoRNA gene predicted gene, 22916
Vmn2r-ps34 6 124138731 to 124173146 34415 - pseudogene vomeronasal 2, receptor, pseudogene 34
Gm23554 6 124142185 to 124142294 109 + snoRNA gene predicted gene, 23554
Vmn2r27 6 124191596 to 124231784 40188 - protein coding gene vomeronasal 2, receptor27
Gm6423 6 124251531 to 124252464 933 + pseudogene predicted gene 6423
Tssr58815 6 124272528 to 124272538 10 + TSS region transcription start site region 58815
Gm43971 6 124279485 to 124282592 3107 + lincRNA gene predicted gene, 43971
Tssr58816 6 124279797 to 124279811 14 + TSS region transcription start site region 58816
Gm6308 6 124297863 to 124298175 312 + pseudogene predicted gene 6308
Gm25311 6 124304297 to 124304428 131 - snoRNA gene predicted gene, 25311
Tssr58817 6 124304646 to 124304671 25 + TSS region transcription start site region 58817
Cd163 6 124304656 to 124330527 25871 + protein coding gene CD163 antigen
Tssr58818 6 124320527 to 124320537 10 + TSS region transcription start site region 58818
Tssr63072 6 124321556 to 124321627 71 - TSS region transcription start site region 63072
Tssr63073 6 124321632 to 124321654 22 - TSS region transcription start site region 63073
Tssr63074 6 124321660 to 124321670 10 - TSS region transcription start site region 63074
1700013D24Rik 6 124347598 to 124357069 9471 - protein coding gene RIKEN cDNA 1700013D24 gene
Tssr63075 6 124357032 to 124357054 22 - TSS region transcription start site region 63075
Tssr63076 6 124357067 to 124357078 11 - TSS region transcription start site region 63076
Pas17 6 124357314 to 145656013 21298699 QTL pulmonary adenoma susceptibility 17
D6Mit12 6 124357314 to 124357438 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 12
1700027F06Rik 6 124363282 to 124364486 1204 - lincRNA gene RIKEN cDNA 1700027F06 gene
Tssr63077 6 124364470 to 124364477 7 - TSS region transcription start site region 63077
Tssr63078 6 124364479 to 124364495 16 - TSS region transcription start site region 63078
1700060L04Rik 6 124372161 to 124374804 2643 lncRNA gene RIKEN cDNA 1700060L04 gene
Gm44006 6 124372162 to 124374805 2643 + lincRNA gene predicted gene, 44006
Gm44007 6 124381972 to 124384160 2188 - unclassified gene predicted gene, 44007
Pex5 6 124396816 to 124415067 18251 - protein coding gene peroxisomal biogenesis factor 5
Cpgi17959 6 124414315 to 124415420 1105 CpG island CpG island 17959
Tssr63079 6 124415017 to 124415026 9 - TSS region transcription start site region 63079
Tssr63080 6 124415037 to 124415078 41 - TSS region transcription start site region 63080
D830015G05Rik 6 124415090 to 124423436 8346 + lncRNA gene RIKEN cDNA D830015G05 gene
Clstn3 6 124430756 to 124464784 34028 - protein coding gene calsyntenin 3
Tssr63081 6 124431601 to 124431610 9 - TSS region transcription start site region 63081