Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:123277814-124398190

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116 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr58807 6 123277833 to 123277838 5 + TSS region transcription start site region 58807
Tssr63019 6 123281528 to 123281572 44 - TSS region transcription start site region 63019
Clec4e 6 123281789 to 123289870 8081 - protein coding gene C-type lectin domain family 4, member e
Tssr63020 6 123282493 to 123282504 11 - TSS region transcription start site region 63020
Tssr63021 6 123282579 to 123282582 3 - TSS region transcription start site region 63021
Tssr63022 6 123282614 to 123282621 7 - TSS region transcription start site region 63022
Tssr63023 6 123282642 to 123282676 34 - TSS region transcription start site region 63023
Tssr58808 6 123282730 to 123282780 50 + TSS region transcription start site region 58808
Tssr63024 6 123282745 to 123282774 29 - TSS region transcription start site region 63024
Tssr63025 6 123282798 to 123282806 8 - TSS region transcription start site region 63025
Tssr63026 6 123282809 to 123282827 18 - TSS region transcription start site region 63026
Tssr63027 6 123282858 to 123282865 7 - TSS region transcription start site region 63027
Tssr63028 6 123282871 to 123282890 19 - TSS region transcription start site region 63028
Tssr63029 6 123282902 to 123282918 16 - TSS region transcription start site region 63029
Tssr63030 6 123282932 to 123282974 42 - TSS region transcription start site region 63030
Tssr63031 6 123282989 to 123283004 15 - TSS region transcription start site region 63031
Tssr63032 6 123283013 to 123283035 22 - TSS region transcription start site region 63032
Tssr63033 6 123283038 to 123283049 11 - TSS region transcription start site region 63033
Tssr63034 6 123283057 to 123283075 18 - TSS region transcription start site region 63034
Tssr63035 6 123283078 to 123283090 12 - TSS region transcription start site region 63035
Tssr63036 6 123283132 to 123283157 25 - TSS region transcription start site region 63036
Tssr63037 6 123283162 to 123283190 28 - TSS region transcription start site region 63037
Tssr63038 6 123283199 to 123283215 16 - TSS region transcription start site region 63038
Tssr63039 6 123283258 to 123283283 25 - TSS region transcription start site region 63039
Tssr63040 6 123283316 to 123283327 11 - TSS region transcription start site region 63040
Tssr63041 6 123283365 to 123283374 9 - TSS region transcription start site region 63041
Tssr63042 6 123283390 to 123283394 4 - TSS region transcription start site region 63042
Tssr58809 6 123283392 to 123283417 25 + TSS region transcription start site region 58809
Tssr63043 6 123283400 to 123283411 11 - TSS region transcription start site region 63043
Tssr58810 6 123283418 to 123283442 24 + TSS region transcription start site region 58810
Tssr63044 6 123283422 to 123283446 24 - TSS region transcription start site region 63044
Tssr58811 6 123283454 to 123283531 77 + TSS region transcription start site region 58811
Tssr63045 6 123283513 to 123283526 13 - TSS region transcription start site region 63045
Tssr63046 6 123283532 to 123283539 7 - TSS region transcription start site region 63046
Tssr63047 6 123283555 to 123283560 5 - TSS region transcription start site region 63047
Tssr63048 6 123283583 to 123283594 11 - TSS region transcription start site region 63048
Tssr63049 6 123283598 to 123283618 20 - TSS region transcription start site region 63049
Tssr63050 6 123283622 to 123283663 41 - TSS region transcription start site region 63050
Tssr63051 6 123283674 to 123283685 11 - TSS region transcription start site region 63051
Tssr63052 6 123285187 to 123285206 19 - TSS region transcription start site region 63052
Tssr63053 6 123285297 to 123285325 28 - TSS region transcription start site region 63053
Tssr63054 6 123285464 to 123285473 9 - TSS region transcription start site region 63054
Tssr63055 6 123285491 to 123285524 33 - TSS region transcription start site region 63055
Tssr63056 6 123285532 to 123285547 15 - TSS region transcription start site region 63056
Tssr63057 6 123285565 to 123285589 24 - TSS region transcription start site region 63057
Tssr63058 6 123286225 to 123286301 76 - TSS region transcription start site region 63058
Tssr63059 6 123286304 to 123286367 63 - TSS region transcription start site region 63059
Tssr63060 6 123286482 to 123286492 10 - TSS region transcription start site region 63060
Tssr63061 6 123287037 to 123287039 2 - TSS region transcription start site region 63061
Tssr63062 6 123287386 to 123287397 11 - TSS region transcription start site region 63062
Tssr63063 6 123288879 to 123288898 19 - TSS region transcription start site region 63063
Tssr63064 6 123288906 to 123289007 101 - TSS region transcription start site region 63064
Tssr63065 6 123289233 to 123289236 3 - TSS region transcription start site region 63065
Tssr63066 6 123289817 to 123289826 9 - TSS region transcription start site region 63066
Tssr63067 6 123289862 to 123289876 14 - TSS region transcription start site region 63067
Tssr63068 6 123290358 to 123290371 13 - TSS region transcription start site region 63068
Tssr63069 6 123290555 to 123290563 8 - TSS region transcription start site region 63069
Tssr63070 6 123290587 to 123290596 9 - TSS region transcription start site region 63070
Tssr63071 6 123290597 to 123290609 12 - TSS region transcription start site region 63071
Vmn2r19 6 123308333 to 123336537 28204 + protein coding gene vomeronasal 2, receptor 19
Gm18375 6 123344279 to 123409813 65534 + pseudogene predicted gene, 18375
Vmn2r20 6 123385262 to 123418061 32799 - protein coding gene vomeronasal 2, receptor 20
Gm22833 6 123424556 to 123424687 131 - snoRNA gene predicted gene, 22833
Vmn2r-ps31 6 123443775 to 123444534 759 + pseudogene vomeronasal 2, receptor, pseudogene 31
Vmn2r21 6 123492508 to 123533406 40898 - protein coding gene vomeronasal 2, receptor 21
Gm25891 6 123506711 to 123506842 131 + snoRNA gene predicted gene, 25891
Gm22722 6 123539901 to 123540032 131 - snoRNA gene predicted gene, 22722
Vmn2r-ps32 6 123559122 to 123559878 756 + pseudogene vomeronasal 2, receptor, pseudogene 32
Vmn2r22 6 123609758 to 123650635 40877 - protein coding gene vomeronasal 2, receptor 22
Gm25065 6 123623932 to 123624063 131 + snoRNA gene predicted gene, 25065
Tssr58812 6 123653488 to 123653493 5 + TSS region transcription start site region 58812
Gm18374 6 123661724 to 123672898 11174 - pseudogene predicted gene, 18374
Vmn2r23 6 123702821 to 123742239 39418 + protein coding gene vomeronasal 2, receptor 23
Gm22724 6 123736886 to 123737012 126 - snoRNA gene predicted gene, 22724
Vmn2r24 6 123778971 to 123816280 37309 + protein coding gene vomeronasal 2, receptor 24
Gm18608 6 123793710 to 123794546 836 + pseudogene predicted gene, 18608
Gm23079 6 123808105 to 123808221 116 - snoRNA gene predicted gene, 23079
Vmn2r25 6 123822814 to 123853190 30376 - protein coding gene vomeronasal 2, receptor 25
Gm5317 6 123886396 to 123887242 846 + pseudogene predicted gene 5317
A330044P14Rik 6 123932288 to 123939493 7205 - pseudogene RIKEN cDNA A330044P14 gene
Gm44823 6 123932293 to 123939493 7200 - pseudogene predicted gene 44823
Gm22763 6 123954883 to 123954989 106 + snoRNA gene predicted gene, 22763
Gm21023 6 123959783 to 123978041 18258 - pseudogene predicted gene, 21023
Vmn2r26 6 124024758 to 124062035 37277 + protein coding gene vomeronasal 2, receptor 26
Gm24843 6 124058539 to 124058614 75 - snoRNA gene predicted gene, 24843
Tssr58813 6 124065805 to 124065808 3 + TSS region transcription start site region 58813
Tssr58814 6 124068122 to 124068170 48 + TSS region transcription start site region 58814
Vmn2r-ps33 6 124081698 to 124082601 903 - pseudogene vomeronasal 2, receptor, pseudogene 33
Gm22916 6 124095450 to 124095568 118 + snoRNA gene predicted gene, 22916
Vmn2r-ps34 6 124138731 to 124173146 34415 - pseudogene vomeronasal 2, receptor, pseudogene 34
Gm23554 6 124142185 to 124142294 109 + snoRNA gene predicted gene, 23554
Vmn2r27 6 124191596 to 124231784 40188 - protein coding gene vomeronasal 2, receptor27
Gm6423 6 124251531 to 124252464 933 + pseudogene predicted gene 6423
Tssr58815 6 124272528 to 124272538 10 + TSS region transcription start site region 58815
Gm43971 6 124279485 to 124282592 3107 + lincRNA gene predicted gene, 43971
Tssr58816 6 124279797 to 124279811 14 + TSS region transcription start site region 58816
Gm6308 6 124297863 to 124298175 312 + pseudogene predicted gene 6308
Gm25311 6 124304297 to 124304428 131 - snoRNA gene predicted gene, 25311
Tssr58817 6 124304646 to 124304671 25 + TSS region transcription start site region 58817
Cd163 6 124304656 to 124330527 25871 + protein coding gene CD163 antigen
Tssr58818 6 124320527 to 124320537 10 + TSS region transcription start site region 58818
Tssr63072 6 124321556 to 124321627 71 - TSS region transcription start site region 63072
Tssr63073 6 124321632 to 124321654 22 - TSS region transcription start site region 63073
Tssr63074 6 124321660 to 124321670 10 - TSS region transcription start site region 63074
1700013D24Rik 6 124347598 to 124357069 9471 - protein coding gene RIKEN cDNA 1700013D24 gene
Tssr63075 6 124357032 to 124357054 22 - TSS region transcription start site region 63075
Tssr63076 6 124357067 to 124357078 11 - TSS region transcription start site region 63076
D6Mit12 6 124357314 to 124357438 124 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 12
Pas17 6 124357314 to 145656013 21298699 QTL pulmonary adenoma susceptibility 17
1700027F06Rik 6 124363282 to 124364486 1204 - lincRNA gene RIKEN cDNA 1700027F06 gene
Tssr63077 6 124364470 to 124364477 7 - TSS region transcription start site region 63077
Tssr63078 6 124364479 to 124364495 16 - TSS region transcription start site region 63078
1700060L04Rik 6 124372161 to 124374804 2643 lncRNA gene RIKEN cDNA 1700060L04 gene
Gm44006 6 124372162 to 124374805 2643 + lincRNA gene predicted gene, 44006
Gm44007 6 124381972 to 124384160 2188 - unclassified gene predicted gene, 44007
Pex5 6 124396816 to 124415067 18251 - protein coding gene peroxisomal biogenesis factor 5