Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:122864962-123256555

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17958 6 122874291 to 122875104 813 CpG island CpG island 17958
Tssr58715 6 122874526 to 122874573 47 + TSS region transcription start site region 58715
Necap1 6 122874557 to 122888941 14384 + protein coding gene NECAP endocytosis associated 1
Tssr58716 6 122875346 to 122875351 5 + TSS region transcription start site region 58716
Tssr58717 6 122882897 to 122882908 11 + TSS region transcription start site region 58717
Gm5316 6 122899731 to 122900538 807 - pseudogene predicted gene 5316
Tssr2002 6 122901587 to 122901588 1 + TSS region transcription start site region 2002
Tssr63009 6 122921480 to 122921516 36 - TSS region transcription start site region 63009
Tssr2003 6 122921788 to 122921799 11 + TSS region transcription start site region 2003
Tssr58718 6 122921805 to 122921865 60 + TSS region transcription start site region 58718
Clec4a1 6 122921848 to 122934619 12771 + protein coding gene C-type lectin domain family 4, member a1
Tssr58719 6 122922552 to 122922577 25 + TSS region transcription start site region 58719
Tssr58720 6 122922596 to 122922619 23 + TSS region transcription start site region 58720
Tssr58721 6 122922744 to 122922756 12 + TSS region transcription start site region 58721
Tssr58722 6 122923676 to 122923726 50 + TSS region transcription start site region 58722
Tssr58723 6 122928986 to 122929012 26 + TSS region transcription start site region 58723
Tssr58724 6 122932190 to 122932204 14 + TSS region transcription start site region 58724
Tssr58725 6 122932222 to 122932239 17 + TSS region transcription start site region 58725
Tssr58726 6 122933771 to 122933791 20 + TSS region transcription start site region 58726
Tssr58727 6 122933848 to 122933872 24 + TSS region transcription start site region 58727
Tssr58728 6 122933901 to 122933920 19 + TSS region transcription start site region 58728
Tssr58729 6 122933964 to 122933976 12 + TSS region transcription start site region 58729
Tssr58730 6 122933983 to 122934003 20 + TSS region transcription start site region 58730
Tssr63010 6 122933993 to 122934004 11 - TSS region transcription start site region 63010
Tssr58731 6 122934024 to 122934039 15 + TSS region transcription start site region 58731
Tssr63011 6 122934041 to 122934088 47 - TSS region transcription start site region 63011
Tssr58732 6 122934076 to 122934126 50 + TSS region transcription start site region 58732
Tssr58733 6 122934142 to 122934157 15 + TSS region transcription start site region 58733
Tssr58734 6 122947048 to 122947090 42 + TSS region transcription start site region 58734
Tssr63012 6 122952401 to 122952416 15 - TSS region transcription start site region 63012
Tssr58735 6 122952420 to 122952440 20 + TSS region transcription start site region 58735
Tssr58736 6 122952450 to 122952505 55 + TSS region transcription start site region 58736
Clec4a3 6 122952515 to 122969875 17360 + protein coding gene C-type lectin domain family 4, member a3
Tssr58737 6 122952533 to 122952555 22 + TSS region transcription start site region 58737
Tssr63013 6 122952539 to 122952552 13 - TSS region transcription start site region 63013
Tssr58738 6 122952632 to 122952650 18 + TSS region transcription start site region 58738
Tssr58739 6 122952684 to 122952697 13 + TSS region transcription start site region 58739
Tssr58740 6 122952701 to 122952763 62 + TSS region transcription start site region 58740
Tssr58741 6 122952794 to 122952809 15 + TSS region transcription start site region 58741
Tssr58742 6 122952810 to 122952832 22 + TSS region transcription start site region 58742
Tssr58743 6 122969439 to 122969457 18 + TSS region transcription start site region 58743
Tssr58744 6 122990295 to 122990308 13 + TSS region transcription start site region 58744
Tssr58745 6 122990350 to 122990365 15 + TSS region transcription start site region 58745
Clec4a4 6 122990367 to 123024105 33738 + protein coding gene C-type lectin domain family 4, member a4
D6Mit300 6 122991353 to 122991456 103 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 300
Clec4b1 6 123049962 to 123071555 21593 + protein coding gene C-type lectin domain family 4, member b1
Tssr58746 6 123049967 to 123049979 12 + TSS region transcription start site region 58746
Tssr58747 6 123049980 to 123049991 11 + TSS region transcription start site region 58747
Tssr58748 6 123049999 to 123050021 22 + TSS region transcription start site region 58748
Tssr58749 6 123050026 to 123050064 38 + TSS region transcription start site region 58749
Gm44132 6 123114595 to 123114745 150 + pseudogene predicted gene, 44132
Tssr58750 6 123122656 to 123122732 76 + TSS region transcription start site region 58750
Clec4a2 6 123122690 to 123143999 21309 + protein coding gene C-type lectin domain family 4, member a2
Tssr58751 6 123123313 to 123123342 29 + TSS region transcription start site region 58751
Tssr58752 6 123123353 to 123123369 16 + TSS region transcription start site region 58752
Tssr58753 6 123123385 to 123123416 31 + TSS region transcription start site region 58753
Tssr58754 6 123123423 to 123123484 61 + TSS region transcription start site region 58754
Tssr58755 6 123123514 to 123123528 14 + TSS region transcription start site region 58755
Tssr58756 6 123123553 to 123123564 11 + TSS region transcription start site region 58756
Tssr58757 6 123124430 to 123124441 11 + TSS region transcription start site region 58757
Tssr58758 6 123124514 to 123124529 15 + TSS region transcription start site region 58758
Tssr58759 6 123124540 to 123124564 24 + TSS region transcription start site region 58759
Tssr58760 6 123129809 to 123129818 9 + TSS region transcription start site region 58760
Tssr58761 6 123138409 to 123138427 18 + TSS region transcription start site region 58761
Tssr58762 6 123138432 to 123138444 12 + TSS region transcription start site region 58762
Gm44147 6 123150076 to 123150169 93 + pseudogene predicted gene, 44147
Tssr2004 6 123172888 to 123172896 8 + TSS region transcription start site region 2004
Clec4b2 6 123172893 to 123204671 31778 + protein coding gene C-type lectin domain family 4, member b2
Gm22946 6 123195632 to 123195713 81 - snRNA gene predicted gene, 22946
Tssr58763 6 123207513 to 123207517 4 + TSS region transcription start site region 58763
Gm5883 6 123218953 to 123219447 494 - pseudogene predicted gene 5883
Clec4n 6 123229843 to 123247021 17178 + protein coding gene C-type lectin domain family 4, member n
Tssr58764 6 123229847 to 123229863 16 + TSS region transcription start site region 58764
Tssr58765 6 123229922 to 123229927 5 + TSS region transcription start site region 58765
Tssr58766 6 123237096 to 123237121 25 + TSS region transcription start site region 58766
Tssr58767 6 123253080 to 123253113 33 + TSS region transcription start site region 58767
Tssr58768 6 123253132 to 123253142 10 + TSS region transcription start site region 58768