Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:122842552-123002577

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97 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxj2 6 122820184 to 122845366 25182 + protein coding gene forkhead box J2
Tssr62965 6 122846512 to 122846535 23 - TSS region transcription start site region 62965
C3ar1 6 122847140 to 122856157 9017 - protein coding gene complement component 3a receptor 1
Tssr62966 6 122847751 to 122847786 35 - TSS region transcription start site region 62966
Tssr62967 6 122847789 to 122847831 42 - TSS region transcription start site region 62967
Tssr62968 6 122847866 to 122847879 13 - TSS region transcription start site region 62968
Tssr58709 6 122847969 to 122847976 7 + TSS region transcription start site region 58709
Tssr58710 6 122848158 to 122848196 38 + TSS region transcription start site region 58710
Tssr62969 6 122848170 to 122848199 29 - TSS region transcription start site region 62969
Tssr62970 6 122848203 to 122848219 16 - TSS region transcription start site region 62970
Tssr62971 6 122848268 to 122848279 11 - TSS region transcription start site region 62971
Tssr62972 6 122848370 to 122848379 9 - TSS region transcription start site region 62972
Tssr62973 6 122848429 to 122848440 11 - TSS region transcription start site region 62973
Tssr62974 6 122848496 to 122848526 30 - TSS region transcription start site region 62974
Tssr62975 6 122848607 to 122848611 4 - TSS region transcription start site region 62975
Tssr62976 6 122848653 to 122848700 47 - TSS region transcription start site region 62976
Tssr62977 6 122848716 to 122848758 42 - TSS region transcription start site region 62977
Tssr62978 6 122848793 to 122848812 19 - TSS region transcription start site region 62978
Tssr62979 6 122848824 to 122848845 21 - TSS region transcription start site region 62979
Tssr62980 6 122848849 to 122848861 12 - TSS region transcription start site region 62980
Tssr62981 6 122848868 to 122848880 12 - TSS region transcription start site region 62981
Tssr62982 6 122849029 to 122849039 10 - TSS region transcription start site region 62982
Tssr62983 6 122849486 to 122849497 11 - TSS region transcription start site region 62983
Tssr62984 6 122849556 to 122849593 37 - TSS region transcription start site region 62984
Tssr62985 6 122849599 to 122849632 33 - TSS region transcription start site region 62985
Tssr62986 6 122849910 to 122849927 17 - TSS region transcription start site region 62986
Tssr62987 6 122850040 to 122850053 13 - TSS region transcription start site region 62987
Tssr62988 6 122850108 to 122850119 11 - TSS region transcription start site region 62988
Tssr62989 6 122850267 to 122850279 12 - TSS region transcription start site region 62989
Tssr62990 6 122850313 to 122850332 19 - TSS region transcription start site region 62990
Tssr62991 6 122850340 to 122850361 21 - TSS region transcription start site region 62991
Tssr62992 6 122850365 to 122850411 46 - TSS region transcription start site region 62992
Tssr58711 6 122850457 to 122850509 52 + TSS region transcription start site region 58711
Tssr62993 6 122850459 to 122850504 45 - TSS region transcription start site region 62993
Tssr62994 6 122850565 to 122850681 116 - TSS region transcription start site region 62994
Tssr58712 6 122850575 to 122850590 15 + TSS region transcription start site region 58712
Tssr58713 6 122850631 to 122850658 27 + TSS region transcription start site region 58713
Tssr62995 6 122850682 to 122850735 53 - TSS region transcription start site region 62995
Tssr62996 6 122850742 to 122850872 130 - TSS region transcription start site region 62996
Tssr62997 6 122850884 to 122850938 54 - TSS region transcription start site region 62997
Tssr62998 6 122850939 to 122851009 70 - TSS region transcription start site region 62998
Tssr62999 6 122851010 to 122851062 52 - TSS region transcription start site region 62999
Tssr63000 6 122851067 to 122851085 18 - TSS region transcription start site region 63000
Tssr63001 6 122851090 to 122851101 11 - TSS region transcription start site region 63001
Tssr63002 6 122852848 to 122852868 20 - TSS region transcription start site region 63002
Tssr58714 6 122852935 to 122852956 21 + TSS region transcription start site region 58714
Tssr63003 6 122855560 to 122855578 18 - TSS region transcription start site region 63003
Tssr63004 6 122855852 to 122855856 4 - TSS region transcription start site region 63004
Tssr63005 6 122856022 to 122856058 36 - TSS region transcription start site region 63005
Tssr63006 6 122856068 to 122856089 21 - TSS region transcription start site region 63006
Tssr63007 6 122856097 to 122856110 13 - TSS region transcription start site region 63007
Tssr63008 6 122856151 to 122856163 12 - TSS region transcription start site region 63008
Cpgi17958 6 122874291 to 122875104 813 CpG island CpG island 17958
Tssr58715 6 122874526 to 122874573 47 + TSS region transcription start site region 58715
Necap1 6 122874557 to 122888941 14384 + protein coding gene NECAP endocytosis associated 1
Tssr58716 6 122875346 to 122875351 5 + TSS region transcription start site region 58716
Tssr58717 6 122882897 to 122882908 11 + TSS region transcription start site region 58717
Gm5316 6 122899731 to 122900538 807 - pseudogene predicted gene 5316
Tssr2002 6 122901587 to 122901588 1 + TSS region transcription start site region 2002
Tssr63009 6 122921480 to 122921516 36 - TSS region transcription start site region 63009
Tssr2003 6 122921788 to 122921799 11 + TSS region transcription start site region 2003
Tssr58718 6 122921805 to 122921865 60 + TSS region transcription start site region 58718
Clec4a1 6 122921848 to 122934619 12771 + protein coding gene C-type lectin domain family 4, member a1
Tssr58719 6 122922552 to 122922577 25 + TSS region transcription start site region 58719
Tssr58720 6 122922596 to 122922619 23 + TSS region transcription start site region 58720
Tssr58721 6 122922744 to 122922756 12 + TSS region transcription start site region 58721
Tssr58722 6 122923676 to 122923726 50 + TSS region transcription start site region 58722
Tssr58723 6 122928986 to 122929012 26 + TSS region transcription start site region 58723
Tssr58724 6 122932190 to 122932204 14 + TSS region transcription start site region 58724
Tssr58725 6 122932222 to 122932239 17 + TSS region transcription start site region 58725
Tssr58726 6 122933771 to 122933791 20 + TSS region transcription start site region 58726
Tssr58727 6 122933848 to 122933872 24 + TSS region transcription start site region 58727
Tssr58728 6 122933901 to 122933920 19 + TSS region transcription start site region 58728
Tssr58729 6 122933964 to 122933976 12 + TSS region transcription start site region 58729
Tssr58730 6 122933983 to 122934003 20 + TSS region transcription start site region 58730
Tssr63010 6 122933993 to 122934004 11 - TSS region transcription start site region 63010
Tssr58731 6 122934024 to 122934039 15 + TSS region transcription start site region 58731
Tssr63011 6 122934041 to 122934088 47 - TSS region transcription start site region 63011
Tssr58732 6 122934076 to 122934126 50 + TSS region transcription start site region 58732
Tssr58733 6 122934142 to 122934157 15 + TSS region transcription start site region 58733
Tssr58734 6 122947048 to 122947090 42 + TSS region transcription start site region 58734
Tssr63012 6 122952401 to 122952416 15 - TSS region transcription start site region 63012
Tssr58735 6 122952420 to 122952440 20 + TSS region transcription start site region 58735
Tssr58736 6 122952450 to 122952505 55 + TSS region transcription start site region 58736
Clec4a3 6 122952515 to 122969875 17360 + protein coding gene C-type lectin domain family 4, member a3
Tssr58737 6 122952533 to 122952555 22 + TSS region transcription start site region 58737
Tssr63013 6 122952539 to 122952552 13 - TSS region transcription start site region 63013
Tssr58738 6 122952632 to 122952650 18 + TSS region transcription start site region 58738
Tssr58739 6 122952684 to 122952697 13 + TSS region transcription start site region 58739
Tssr58740 6 122952701 to 122952763 62 + TSS region transcription start site region 58740
Tssr58741 6 122952794 to 122952809 15 + TSS region transcription start site region 58741
Tssr58742 6 122952810 to 122952832 22 + TSS region transcription start site region 58742
Tssr58743 6 122969439 to 122969457 18 + TSS region transcription start site region 58743
Tssr58744 6 122990295 to 122990308 13 + TSS region transcription start site region 58744
Tssr58745 6 122990350 to 122990365 15 + TSS region transcription start site region 58745
Clec4a4 6 122990367 to 123024105 33738 + protein coding gene C-type lectin domain family 4, member a4
D6Mit300 6 122991353 to 122991456 103 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 300