Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:122710261-122820273

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nanog 6 122707489 to 122714633 7144 + protein coding gene Nanog homeobox
Slc2a3 6 122727809 to 122801640 73831 - protein coding gene solute carrier family 2 (facilitated glucose transporter), member 3
Tssr62942 6 122728326 to 122728338 12 - TSS region transcription start site region 62942
Tssr62943 6 122728379 to 122728410 31 - TSS region transcription start site region 62943
Tssr62944 6 122729496 to 122729544 48 - TSS region transcription start site region 62944
Tssr62945 6 122729908 to 122729929 21 - TSS region transcription start site region 62945
Tssr62946 6 122730004 to 122730048 44 - TSS region transcription start site region 62946
Tssr62947 6 122730097 to 122730119 22 - TSS region transcription start site region 62947
Tssr62948 6 122730120 to 122730132 12 - TSS region transcription start site region 62948
Tssr62949 6 122732401 to 122732422 21 - TSS region transcription start site region 62949
Tssr62950 6 122732438 to 122732459 21 - TSS region transcription start site region 62950
Cpgi17952 6 122742053 to 122742435 382 CpG island CpG island 17952
Tssr62951 6 122742482 to 122742502 20 - TSS region transcription start site region 62951
Tssr62952 6 122742509 to 122742527 18 - TSS region transcription start site region 62952
Tssr62953 6 122758826 to 122758858 32 - TSS region transcription start site region 62953
Tssr58696 6 122761230 to 122761241 11 + TSS region transcription start site region 58696
Tssr58697 6 122761252 to 122761275 23 + TSS region transcription start site region 58697
Tssr58698 6 122761438 to 122761440 2 + TSS region transcription start site region 58698
Cpgi17953 6 122764253 to 122765287 1034 CpG island CpG island 17953
Tssr62954 6 122764747 to 122764760 13 - TSS region transcription start site region 62954
Tssr62955 6 122765261 to 122765273 12 - TSS region transcription start site region 62955
Tssr58699 6 122770695 to 122770707 12 + TSS region transcription start site region 58699
Tssr62956 6 122779966 to 122779970 4 - TSS region transcription start site region 62956
D6Mit151 6 122785106 to 122785252 146 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 151
Gm4482 6 122792584 to 122793325 741 - pseudogene predicted gene 4482
Tssr62957 6 122800825 to 122800827 2 - TSS region transcription start site region 62957
Cpgi17954 6 122801336 to 122802365 1029 CpG island CpG island 17954
Tssr62958 6 122801639 to 122801653 14 - TSS region transcription start site region 62958
Tssr62959 6 122801661 to 122801677 16 - TSS region transcription start site region 62959
Tssr62960 6 122801680 to 122801723 43 - TSS region transcription start site region 62960
Tssr62961 6 122801726 to 122801740 14 - TSS region transcription start site region 62961
Tssr2001 6 122801747 to 122801756 9 - TSS region transcription start site region 2001
Tssr62962 6 122802169 to 122802232 63 - TSS region transcription start site region 62962
Cpgi17955 6 122810491 to 122811636 1145 CpG island CpG island 17955
Gm5112 6 122811170 to 122813537 2367 + protein coding gene predicted gene 5112
Tssr58700 6 122811189 to 122811221 32 + TSS region transcription start site region 58700
Tssr58701 6 122811504 to 122811521 17 + TSS region transcription start site region 58701
Gm26826 6 122813619 to 122820614 6995 - antisense lncRNA gene predicted gene, 26826
Cpgi17956 6 122819434 to 122820857 1423 CpG island CpG island 17956
Tssr58702 6 122819888 to 122819938 50 + TSS region transcription start site region 58702
Tssr58703 6 122819939 to 122819950 11 + TSS region transcription start site region 58703
Foxj2 6 122820184 to 122845366 25182 + protein coding gene forkhead box J2