MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:121418196-121658523

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Iqsec3	6	121372933 to 121473678	100745	-	protein coding gene	IQ motif and Sec7 domain 3
Cpgi17940	6	121428326 to 121428540	214		CpG island	CpG island 17940
Cpgi17941	6	121462843 to 121463249	406		CpG island	CpG island 17941
Cpgi17942	6	121472856 to 121473908	1052		CpG island	CpG island 17942
Tssr62813	6	121473588 to 121473628	40	-	TSS region	transcription start site region 62813
Tssr62814	6	121473630 to 121473680	50	-	TSS region	transcription start site region 62814
Gm43922	6	121538196 to 121538523	327	+	pseudogene	predicted gene, 43922
Gm43933	6	121547594 to 121547860	266	-	pseudogene	predicted gene, 43933
Gm43934	6	121560201 to 121560588	387	+	pseudogene	predicted gene, 43934
Gm43945	6	121625712 to 121626465	753	+	pseudogene	predicted gene, 43945
Tssr1993	6	121630434 to 121630437	3	+	TSS region	transcription start site region 1993
A2m	6	121636166 to 121679238	43072	+	protein coding gene	alpha-2-macroglobulin
Tssr58629	6	121636218 to 121636237	19	+	TSS region	transcription start site region 58629
Tssr58630	6	121636258 to 121636265	7	+	TSS region	transcription start site region 58630
Cpgi17943	6	121636262 to 121636419	157		CpG island	CpG island 17943
Tssr58631	6	121636268 to 121636279	11	+	TSS region	transcription start site region 58631
Tssr58632	6	121638288 to 121638299	11	+	TSS region	transcription start site region 58632
Tssr58633	6	121641334 to 121641352	18	+	TSS region	transcription start site region 58633
Tssr58634	6	121644896 to 121644927	31	+	TSS region	transcription start site region 58634