Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:121391258-121881265

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqsec3 6 121372933 to 121473678 100745 - protein coding gene IQ motif and Sec7 domain 3
Cpgi17939 6 121412368 to 121413754 1386 CpG island CpG island 17939
Cpgi17940 6 121428326 to 121428540 214 CpG island CpG island 17940
Cpgi17941 6 121462843 to 121463249 406 CpG island CpG island 17941
Cpgi17942 6 121472856 to 121473908 1052 CpG island CpG island 17942
Tssr62813 6 121473588 to 121473628 40 - TSS region transcription start site region 62813
Tssr62814 6 121473630 to 121473680 50 - TSS region transcription start site region 62814
Gm43922 6 121538196 to 121538523 327 + pseudogene predicted gene, 43922
Gm43933 6 121547594 to 121547860 266 - pseudogene predicted gene, 43933
Gm43934 6 121560201 to 121560588 387 + pseudogene predicted gene, 43934
Gm43945 6 121625712 to 121626465 753 + pseudogene predicted gene, 43945
Tssr1993 6 121630434 to 121630437 3 + TSS region transcription start site region 1993
A2m 6 121636166 to 121679238 43072 + protein coding gene alpha-2-macroglobulin
Tssr58629 6 121636218 to 121636237 19 + TSS region transcription start site region 58629
Tssr58630 6 121636258 to 121636265 7 + TSS region transcription start site region 58630
Cpgi17943 6 121636262 to 121636419 157 CpG island CpG island 17943
Tssr58631 6 121636268 to 121636279 11 + TSS region transcription start site region 58631
Tssr58632 6 121638288 to 121638299 11 + TSS region transcription start site region 58632
Tssr58633 6 121641334 to 121641352 18 + TSS region transcription start site region 58633
Tssr58634 6 121644896 to 121644927 31 + TSS region transcription start site region 58634
Gm44018 6 121708643 to 121709049 406 - pseudogene predicted gene, 44018
Tssr58635 6 121732971 to 121732972 1 + TSS region transcription start site region 58635
Gm7298 6 121734495 to 121784639 50144 + protein coding gene predicted gene 7298
Gm46973 6 121759018 to 121759151 133 - pseudogene predicted gene, 46973
Tssr58636 6 121838450 to 121838470 20 + TSS region transcription start site region 58636
Tssr58637 6 121838489 to 121838510 21 + TSS region transcription start site region 58637
Tssr58638 6 121838514 to 121838528 14 + TSS region transcription start site region 58638
Mug1 6 121838541 to 121889057 50516 + protein coding gene murinoglobulin 1
Tssr58639 6 121838625 to 121838639 14 + TSS region transcription start site region 58639
Tssr58640 6 121838672 to 121838681 9 + TSS region transcription start site region 58640
Tssr58641 6 121846717 to 121846742 25 + TSS region transcription start site region 58641
Tssr58642 6 121846815 to 121846846 31 + TSS region transcription start site region 58642
Tssr58643 6 121847818 to 121847822 4 + TSS region transcription start site region 58643
Tssr58644 6 121847963 to 121847978 15 + TSS region transcription start site region 58644
Tssr58645 6 121861119 to 121861137 18 + TSS region transcription start site region 58645
Tssr58646 6 121865726 to 121865745 19 + TSS region transcription start site region 58646
Tssr58647 6 121865819 to 121865848 29 + TSS region transcription start site region 58647
Tssr58648 6 121870580 to 121870595 15 + TSS region transcription start site region 58648
Tssr58649 6 121871310 to 121871321 11 + TSS region transcription start site region 58649