Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:121358196-121718523

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc6a12 6 121343076 to 121365775 22699 + protein coding gene solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
Tssr58621 6 121359248 to 121359292 44 + TSS region transcription start site region 58621
Tssr58622 6 121359494 to 121359511 17 + TSS region transcription start site region 58622
Tssr58623 6 121359681 to 121359692 11 + TSS region transcription start site region 58623
Tssr58624 6 121363226 to 121363238 12 + TSS region transcription start site region 58624
Tssr58625 6 121363682 to 121363722 40 + TSS region transcription start site region 58625
Tssr58626 6 121365198 to 121365227 29 + TSS region transcription start site region 58626
Tssr58627 6 121365846 to 121365863 17 + TSS region transcription start site region 58627
Tssr58628 6 121365926 to 121365937 11 + TSS region transcription start site region 58628
Iqsec3 6 121372933 to 121473678 100745 - protein coding gene IQ motif and Sec7 domain 3
Cpgi17939 6 121412368 to 121413754 1386 CpG island CpG island 17939
Cpgi17940 6 121428326 to 121428540 214 CpG island CpG island 17940
Cpgi17941 6 121462843 to 121463249 406 CpG island CpG island 17941
Cpgi17942 6 121472856 to 121473908 1052 CpG island CpG island 17942
Tssr62813 6 121473588 to 121473628 40 - TSS region transcription start site region 62813
Tssr62814 6 121473630 to 121473680 50 - TSS region transcription start site region 62814
Gm43922 6 121538196 to 121538523 327 + pseudogene predicted gene, 43922
Gm43933 6 121547594 to 121547860 266 - pseudogene predicted gene, 43933
Gm43934 6 121560201 to 121560588 387 + pseudogene predicted gene, 43934
Gm43945 6 121625712 to 121626465 753 + pseudogene predicted gene, 43945
Tssr1993 6 121630434 to 121630437 3 + TSS region transcription start site region 1993
A2m 6 121636166 to 121679238 43072 + protein coding gene alpha-2-macroglobulin
Tssr58629 6 121636218 to 121636237 19 + TSS region transcription start site region 58629
Tssr58630 6 121636258 to 121636265 7 + TSS region transcription start site region 58630
Cpgi17943 6 121636262 to 121636419 157 CpG island CpG island 17943
Tssr58631 6 121636268 to 121636279 11 + TSS region transcription start site region 58631
Tssr58632 6 121638288 to 121638299 11 + TSS region transcription start site region 58632
Tssr58633 6 121641334 to 121641352 18 + TSS region transcription start site region 58633
Tssr58634 6 121644896 to 121644927 31 + TSS region transcription start site region 58634
Gm44018 6 121708643 to 121709049 406 - pseudogene predicted gene, 44018