Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:121311931-123472129

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586 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc6a13 6 121300296 to 121337721 37425 + protein coding gene solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Tssr58592 6 121318238 to 121318256 18 + TSS region transcription start site region 58592
Gm24855 6 121325580 to 121325676 96 - miRNA gene predicted gene, 24855
Tssr58593 6 121336383 to 121336408 25 + TSS region transcription start site region 58593
Tssr58594 6 121336800 to 121336850 50 + TSS region transcription start site region 58594
Tssr58595 6 121336861 to 121336872 11 + TSS region transcription start site region 58595
Tssr58596 6 121341988 to 121342011 23 + TSS region transcription start site region 58596
Tssr58597 6 121342456 to 121342467 11 + TSS region transcription start site region 58597
Tssr58598 6 121342504 to 121342515 11 + TSS region transcription start site region 58598
Tssr58599 6 121342517 to 121342526 9 + TSS region transcription start site region 58599
Tssr58600 6 121342560 to 121342585 25 + TSS region transcription start site region 58600
Tssr58601 6 121342869 to 121342880 11 + TSS region transcription start site region 58601
Tssr58602 6 121342882 to 121342924 42 + TSS region transcription start site region 58602
Tssr58603 6 121343052 to 121343073 21 + TSS region transcription start site region 58603
Slc6a12 6 121343076 to 121365775 22699 + protein coding gene solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
Tssr62812 6 121343276 to 121343303 27 - TSS region transcription start site region 62812
Tssr58604 6 121343312 to 121343320 8 + TSS region transcription start site region 58604
Tssr58605 6 121343329 to 121343341 12 + TSS region transcription start site region 58605
Tssr58606 6 121343385 to 121343414 29 + TSS region transcription start site region 58606
Tssr58607 6 121343814 to 121343827 13 + TSS region transcription start site region 58607
Tssr58608 6 121343931 to 121343951 20 + TSS region transcription start site region 58608
Tssr58609 6 121343961 to 121343974 13 + TSS region transcription start site region 58609
Tssr58610 6 121346648 to 121346671 23 + TSS region transcription start site region 58610
Tssr58611 6 121346678 to 121346708 30 + TSS region transcription start site region 58611
Tssr58612 6 121346712 to 121346731 19 + TSS region transcription start site region 58612
Tssr58613 6 121356401 to 121356416 15 + TSS region transcription start site region 58613
Tssr58614 6 121356789 to 121356816 27 + TSS region transcription start site region 58614
Tssr58615 6 121356818 to 121356847 29 + TSS region transcription start site region 58615
Tssr58616 6 121356872 to 121356877 5 + TSS region transcription start site region 58616
Tssr58617 6 121356879 to 121356892 13 + TSS region transcription start site region 58617
Tssr58618 6 121356898 to 121356903 5 + TSS region transcription start site region 58618
Tssr58619 6 121356923 to 121356926 3 + TSS region transcription start site region 58619
Tssr58620 6 121357515 to 121357549 34 + TSS region transcription start site region 58620
Tssr58621 6 121359248 to 121359292 44 + TSS region transcription start site region 58621
Tssr58622 6 121359494 to 121359511 17 + TSS region transcription start site region 58622
Tssr58623 6 121359681 to 121359692 11 + TSS region transcription start site region 58623
Tssr58624 6 121363226 to 121363238 12 + TSS region transcription start site region 58624
Tssr58625 6 121363682 to 121363722 40 + TSS region transcription start site region 58625
Tssr58626 6 121365198 to 121365227 29 + TSS region transcription start site region 58626
Tssr58627 6 121365846 to 121365863 17 + TSS region transcription start site region 58627
Tssr58628 6 121365926 to 121365937 11 + TSS region transcription start site region 58628
Iqsec3 6 121372933 to 121473678 100745 - protein coding gene IQ motif and Sec7 domain 3
Cpgi17939 6 121412368 to 121413754 1386 CpG island CpG island 17939
Cpgi17940 6 121428326 to 121428540 214 CpG island CpG island 17940
Cpgi17941 6 121462843 to 121463249 406 CpG island CpG island 17941
Cpgi17942 6 121472856 to 121473908 1052 CpG island CpG island 17942
Tssr62813 6 121473588 to 121473628 40 - TSS region transcription start site region 62813
Tssr62814 6 121473630 to 121473680 50 - TSS region transcription start site region 62814
Gm43922 6 121538196 to 121538523 327 + pseudogene predicted gene, 43922
Gm43933 6 121547594 to 121547860 266 - pseudogene predicted gene, 43933
Gm43934 6 121560201 to 121560588 387 + pseudogene predicted gene, 43934
Gm43945 6 121625712 to 121626465 753 + pseudogene predicted gene, 43945
Tssr1993 6 121630434 to 121630437 3 + TSS region transcription start site region 1993
A2m 6 121636166 to 121679238 43072 + protein coding gene alpha-2-macroglobulin
Tssr58629 6 121636218 to 121636237 19 + TSS region transcription start site region 58629
Tssr58630 6 121636258 to 121636265 7 + TSS region transcription start site region 58630
Cpgi17943 6 121636262 to 121636419 157 CpG island CpG island 17943
Tssr58631 6 121636268 to 121636279 11 + TSS region transcription start site region 58631
Tssr58632 6 121638288 to 121638299 11 + TSS region transcription start site region 58632
Tssr58633 6 121641334 to 121641352 18 + TSS region transcription start site region 58633
Tssr58634 6 121644896 to 121644927 31 + TSS region transcription start site region 58634
Gm44018 6 121708643 to 121709049 406 - pseudogene predicted gene, 44018
Tssr58635 6 121732971 to 121732972 1 + TSS region transcription start site region 58635
Gm7298 6 121734495 to 121784639 50144 + protein coding gene predicted gene 7298
Gm46973 6 121759018 to 121759151 133 - pseudogene predicted gene, 46973
Tssr58636 6 121838450 to 121838470 20 + TSS region transcription start site region 58636
Tssr58637 6 121838489 to 121838510 21 + TSS region transcription start site region 58637
Tssr58638 6 121838514 to 121838528 14 + TSS region transcription start site region 58638
Mug1 6 121838541 to 121889057 50516 + protein coding gene murinoglobulin 1
Tssr58639 6 121838625 to 121838639 14 + TSS region transcription start site region 58639
Tssr58640 6 121838672 to 121838681 9 + TSS region transcription start site region 58640
Tssr58641 6 121846717 to 121846742 25 + TSS region transcription start site region 58641
Tssr58642 6 121846815 to 121846846 31 + TSS region transcription start site region 58642
Tssr58643 6 121847818 to 121847822 4 + TSS region transcription start site region 58643
Tssr58644 6 121847963 to 121847978 15 + TSS region transcription start site region 58644
Tssr58645 6 121861119 to 121861137 18 + TSS region transcription start site region 58645
Tssr58646 6 121865726 to 121865745 19 + TSS region transcription start site region 58646
Tssr58647 6 121865819 to 121865848 29 + TSS region transcription start site region 58647
Tssr58648 6 121870580 to 121870595 15 + TSS region transcription start site region 58648
Tssr58649 6 121871310 to 121871321 11 + TSS region transcription start site region 58649
Gm44173 6 121914990 to 121915100 110 - pseudogene predicted gene, 44173
Mug4-ps 6 121916430 to 121956147 39717 + pseudogene murinoglobulin 4, pseudogene
Mug2 6 122006761 to 122085965 79204 + protein coding gene murinoglobulin 2
Gm44184 6 122034504 to 122034635 131 - pseudogene predicted gene, 44184
Tssr58650 6 122078704 to 122078707 3 + TSS region transcription start site region 58650
Tssr58651 6 122136628 to 122136638 10 + TSS region transcription start site region 58651
Gm10319 6 122136628 to 122150958 14330 + pseudogene predicted pseudogene 10319
Mug-ps1 6 122176053 to 122248566 72513 + pseudogene murinoglobulin, pseudogene 1
Gm27703 6 122200137 to 122200246 109 + miRNA gene predicted gene, 27703
Gm46974 6 122206326 to 122206643 317 - pseudogene predicted gene, 46974
Klrg1 6 122270596 to 122282833 12237 - protein coding gene killer cell lectin-like receptor subfamily G, member 1
Tssr62815 6 122279820 to 122279843 23 - TSS region transcription start site region 62815
Tssr62816 6 122279931 to 122279956 25 - TSS region transcription start site region 62816
Tssr62817 6 122282588 to 122282628 40 - TSS region transcription start site region 62817
Tssr62818 6 122282787 to 122282798 11 - TSS region transcription start site region 62818
Tssr62819 6 122282810 to 122282821 11 - TSS region transcription start site region 62819
Tssr62820 6 122282890 to 122282908 18 - TSS region transcription start site region 62820
Tssr62821 6 122282910 to 122282921 11 - TSS region transcription start site region 62821
Tssr62822 6 122282946 to 122282955 9 - TSS region transcription start site region 62822
Tssr58652 6 122283003 to 122283025 22 + TSS region transcription start site region 58652
Tssr62823 6 122283229 to 122283242 13 - TSS region transcription start site region 62823
Tssr58653 6 122294094 to 122294111 17 + TSS region transcription start site region 58653
Tssr58654 6 122294147 to 122294163 16 + TSS region transcription start site region 58654
Tssr58655 6 122294174 to 122294185 11 + TSS region transcription start site region 58655
Tssr62824 6 122294474 to 122294488 14 - TSS region transcription start site region 62824
Gm6637 6 122295664 to 122296045 381 + pseudogene predicted gene 6637
Gm27826 6 122305544 to 122305798 254 - unclassified non-coding RNA gene predicted gene, 27826
Gm44227 6 122305948 to 122306188 240 + pseudogene predicted gene, 44227
Cpgi17944 6 122308569 to 122309336 767 CpG island CpG island 17944
Tssr58656 6 122308656 to 122308683 27 + TSS region transcription start site region 58656
Tssr58657 6 122308684 to 122308711 27 + TSS region transcription start site region 58657
Tssr58658 6 122308814 to 122308839 25 + TSS region transcription start site region 58658
Tssr58659 6 122308923 to 122308934 11 + TSS region transcription start site region 58659
Tssr58660 6 122308953 to 122308966 13 + TSS region transcription start site region 58660
Tssr58661 6 122308969 to 122309018 49 + TSS region transcription start site region 58661
M6pr 6 122309010 to 122317677 8667 + protein coding gene mannose-6-phosphate receptor, cation dependent
Tssr1994 6 122309043 to 122309045 2 + TSS region transcription start site region 1994
Tssr1995 6 122309057 to 122309071 14 + TSS region transcription start site region 1995
Tssr58662 6 122316082 to 122316092 10 + TSS region transcription start site region 58662
Phc1 6 122317731 to 122340227 22496 - protein coding gene polyhomeotic 1
Tssr62825 6 122323556 to 122323585 29 - TSS region transcription start site region 62825
Tssr62826 6 122325490 to 122325519 29 - TSS region transcription start site region 62826
Tssr62827 6 122325687 to 122325700 13 - TSS region transcription start site region 62827
Tssr62828 6 122333328 to 122333347 19 - TSS region transcription start site region 62828
Tssr62829 6 122339102 to 122339114 12 - TSS region transcription start site region 62829
Cpgi17945 6 122339158 to 122340350 1192 CpG island CpG island 17945
Tssr62830 6 122339405 to 122339443 38 - TSS region transcription start site region 62830
Tssr62831 6 122339446 to 122339517 71 - TSS region transcription start site region 62831
Tssr62832 6 122339522 to 122339579 57 - TSS region transcription start site region 62832
Tssr62833 6 122339633 to 122339673 40 - TSS region transcription start site region 62833
Tssr62834 6 122339797 to 122339876 79 - TSS region transcription start site region 62834
Tssr58663 6 122339974 to 122340002 28 + TSS region transcription start site region 58663
Tssr62835 6 122340200 to 122340244 44 - TSS region transcription start site region 62835
Tssr62836 6 122340499 to 122340510 11 - TSS region transcription start site region 62836
Tssr62837 6 122340525 to 122340543 18 - TSS region transcription start site region 62837
Tssr62838 6 122340588 to 122340599 11 - TSS region transcription start site region 62838
Tssr58664 6 122340761 to 122340770 9 + TSS region transcription start site region 58664
Tssr58665 6 122341321 to 122341323 2 + TSS region transcription start site region 58665
Tssr62839 6 122342110 to 122342114 4 - TSS region transcription start site region 62839
Tssr58666 6 122342343 to 122342371 28 + TSS region transcription start site region 58666
Tssr58667 6 122342675 to 122342687 12 + TSS region transcription start site region 58667
Tssr58668 6 122342709 to 122342717 8 + TSS region transcription start site region 58668
Tssr62840 6 122344844 to 122344849 5 - TSS region transcription start site region 62840
Tssr62841 6 122344925 to 122344936 11 - TSS region transcription start site region 62841
Tssr62842 6 122345108 to 122345116 8 - TSS region transcription start site region 62842
Tssr62843 6 122345389 to 122345412 23 - TSS region transcription start site region 62843
Tssr62844 6 122345853 to 122345879 26 - TSS region transcription start site region 62844
Tssr58669 6 122345974 to 122345984 10 + TSS region transcription start site region 58669
Tssr58670 6 122365909 to 122365914 5 + TSS region transcription start site region 58670
1700063H04Rik 6 122391379 to 122392687 1308 + lincRNA gene RIKEN cDNA 1700063H04 gene
Cpgi17946 6 122391931 to 122392129 198 CpG island CpG island 17946
Cpgi17947 6 122393155 to 122393498 343 CpG island CpG island 17947
Tssr62845 6 122393460 to 122393474 14 - TSS region transcription start site region 62845
Gm19254 6 122414104 to 122414397 293 + pseudogene predicted gene, 19254
Rimklb 6 122447296 to 122486532 39236 - protein coding gene ribosomal modification protein rimK-like family member B
Tssr62846 6 122455881 to 122455885 4 - TSS region transcription start site region 62846
Tssr58671 6 122456863 to 122456865 2 + TSS region transcription start site region 58671
Gm8430 6 122456904 to 122457374 470 + pseudogene predicted pseudogene 8430
Tssr62847 6 122466554 to 122466597 43 - TSS region transcription start site region 62847
Tssr62848 6 122472698 to 122472710 12 - TSS region transcription start site region 62848
Cpgi17948 6 122485616 to 122487173 1557 CpG island CpG island 17948
Tssr62849 6 122486124 to 122486180 56 - TSS region transcription start site region 62849
Tssr62850 6 122486252 to 122486304 52 - TSS region transcription start site region 62850
Tssr62851 6 122486357 to 122486426 69 - TSS region transcription start site region 62851
Tssr62852 6 122486458 to 122486556 98 - TSS region transcription start site region 62852
Tssr1996 6 122487173 to 122487176 3 - TSS region transcription start site region 1996
Tssr62853 6 122488111 to 122488113 2 - TSS region transcription start site region 62853
Tssr58672 6 122491725 to 122491728 3 + TSS region transcription start site region 58672
Tssr62854 6 122494210 to 122494213 3 - TSS region transcription start site region 62854
Tssr62855 6 122498760 to 122498766 6 - TSS region transcription start site region 62855
Tssr58673 6 122513370 to 122513393 23 + TSS region transcription start site region 58673
Mfap5 6 122513383 to 122529290 15907 + protein coding gene microfibrillar associated protein 5
Tssr58674 6 122513419 to 122513459 40 + TSS region transcription start site region 58674
Tssr1997 6 122513575 to 122513580 5 + TSS region transcription start site region 1997
Tssr58675 6 122513591 to 122513600 9 + TSS region transcription start site region 58675
Tssr58676 6 122513618 to 122513641 23 + TSS region transcription start site region 58676
Tssr58677 6 122513643 to 122513668 25 + TSS region transcription start site region 58677
Tssr58678 6 122513677 to 122513688 11 + TSS region transcription start site region 58678
Tssr58679 6 122521832 to 122521847 15 + TSS region transcription start site region 58679
Tssr62856 6 122545313 to 122545320 7 - TSS region transcription start site region 62856
Tssr62857 6 122545344 to 122545386 42 - TSS region transcription start site region 62857
Tssr58680 6 122553799 to 122553816 17 + TSS region transcription start site region 58680
Aicda 6 122553809 to 122564180 10371 + protein coding gene activation-induced cytidine deaminase
Gm16556 6 122560044 to 122570849 10805 - unclassified non-coding RNA gene predicted gene 16556
Cpgi17949 6 122561085 to 122561281 196 CpG island CpG island 17949
Gm16557 6 122563283 to 122563473 190 - pseudogene predicted gene 16557
Gm8459 6 122566715 to 122567474 759 - pseudogene predicted gene 8459
Tssr62858 6 122570749 to 122570757 8 - TSS region transcription start site region 62858
Tssr62859 6 122570849 to 122570867 18 - TSS region transcription start site region 62859
Tssr1998 6 122570884 to 122570896 12 - TSS region transcription start site region 1998
Tssr62860 6 122571378 to 122571420 42 - TSS region transcription start site region 62860
Tssr58681 6 122571552 to 122571564 12 + TSS region transcription start site region 58681
Apobec1 6 122577792 to 122602444 24652 - protein coding gene apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1
Tssr58682 6 122577795 to 122577802 7 + TSS region transcription start site region 58682
Tssr58683 6 122577871 to 122577898 27 + TSS region transcription start site region 58683
Tssr62861 6 122577906 to 122577944 38 - TSS region transcription start site region 62861
Tssr62862 6 122577962 to 122577985 23 - TSS region transcription start site region 62862
Tssr62863 6 122577991 to 122578002 11 - TSS region transcription start site region 62863
Tssr62864 6 122578010 to 122578021 11 - TSS region transcription start site region 62864
Tssr62865 6 122578051 to 122578061 10 - TSS region transcription start site region 62865