Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:121282971-122182972

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90 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr58590 6 121300280 to 121300297 17 + TSS region transcription start site region 58590
Slc6a13 6 121300296 to 121337721 37425 + protein coding gene solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Tssr58591 6 121300732 to 121300755 23 + TSS region transcription start site region 58591
Tssr58592 6 121318238 to 121318256 18 + TSS region transcription start site region 58592
Gm24855 6 121325580 to 121325676 96 - miRNA gene predicted gene, 24855
Tssr58593 6 121336383 to 121336408 25 + TSS region transcription start site region 58593
Tssr58594 6 121336800 to 121336850 50 + TSS region transcription start site region 58594
Tssr58595 6 121336861 to 121336872 11 + TSS region transcription start site region 58595
Tssr58596 6 121341988 to 121342011 23 + TSS region transcription start site region 58596
Tssr58597 6 121342456 to 121342467 11 + TSS region transcription start site region 58597
Tssr58598 6 121342504 to 121342515 11 + TSS region transcription start site region 58598
Tssr58599 6 121342517 to 121342526 9 + TSS region transcription start site region 58599
Tssr58600 6 121342560 to 121342585 25 + TSS region transcription start site region 58600
Tssr58601 6 121342869 to 121342880 11 + TSS region transcription start site region 58601
Tssr58602 6 121342882 to 121342924 42 + TSS region transcription start site region 58602
Tssr58603 6 121343052 to 121343073 21 + TSS region transcription start site region 58603
Slc6a12 6 121343076 to 121365775 22699 + protein coding gene solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
Tssr62812 6 121343276 to 121343303 27 - TSS region transcription start site region 62812
Tssr58604 6 121343312 to 121343320 8 + TSS region transcription start site region 58604
Tssr58605 6 121343329 to 121343341 12 + TSS region transcription start site region 58605
Tssr58606 6 121343385 to 121343414 29 + TSS region transcription start site region 58606
Tssr58607 6 121343814 to 121343827 13 + TSS region transcription start site region 58607
Tssr58608 6 121343931 to 121343951 20 + TSS region transcription start site region 58608
Tssr58609 6 121343961 to 121343974 13 + TSS region transcription start site region 58609
Tssr58610 6 121346648 to 121346671 23 + TSS region transcription start site region 58610
Tssr58611 6 121346678 to 121346708 30 + TSS region transcription start site region 58611
Tssr58612 6 121346712 to 121346731 19 + TSS region transcription start site region 58612
Tssr58613 6 121356401 to 121356416 15 + TSS region transcription start site region 58613
Tssr58614 6 121356789 to 121356816 27 + TSS region transcription start site region 58614
Tssr58615 6 121356818 to 121356847 29 + TSS region transcription start site region 58615
Tssr58616 6 121356872 to 121356877 5 + TSS region transcription start site region 58616
Tssr58617 6 121356879 to 121356892 13 + TSS region transcription start site region 58617
Tssr58618 6 121356898 to 121356903 5 + TSS region transcription start site region 58618
Tssr58619 6 121356923 to 121356926 3 + TSS region transcription start site region 58619
Tssr58620 6 121357515 to 121357549 34 + TSS region transcription start site region 58620
Tssr58621 6 121359248 to 121359292 44 + TSS region transcription start site region 58621
Tssr58622 6 121359494 to 121359511 17 + TSS region transcription start site region 58622
Tssr58623 6 121359681 to 121359692 11 + TSS region transcription start site region 58623
Tssr58624 6 121363226 to 121363238 12 + TSS region transcription start site region 58624
Tssr58625 6 121363682 to 121363722 40 + TSS region transcription start site region 58625
Tssr58626 6 121365198 to 121365227 29 + TSS region transcription start site region 58626
Tssr58627 6 121365846 to 121365863 17 + TSS region transcription start site region 58627
Tssr58628 6 121365926 to 121365937 11 + TSS region transcription start site region 58628
Iqsec3 6 121372933 to 121473678 100745 - protein coding gene IQ motif and Sec7 domain 3
Cpgi17939 6 121412368 to 121413754 1386 CpG island CpG island 17939
Cpgi17940 6 121428326 to 121428540 214 CpG island CpG island 17940
Cpgi17941 6 121462843 to 121463249 406 CpG island CpG island 17941
Cpgi17942 6 121472856 to 121473908 1052 CpG island CpG island 17942
Tssr62813 6 121473588 to 121473628 40 - TSS region transcription start site region 62813
Tssr62814 6 121473630 to 121473680 50 - TSS region transcription start site region 62814
Gm43922 6 121538196 to 121538523 327 + pseudogene predicted gene, 43922
Gm43933 6 121547594 to 121547860 266 - pseudogene predicted gene, 43933
Gm43934 6 121560201 to 121560588 387 + pseudogene predicted gene, 43934
Gm43945 6 121625712 to 121626465 753 + pseudogene predicted gene, 43945
Tssr1993 6 121630434 to 121630437 3 + TSS region transcription start site region 1993
A2m 6 121636166 to 121679238 43072 + protein coding gene alpha-2-macroglobulin
Tssr58629 6 121636218 to 121636237 19 + TSS region transcription start site region 58629
Tssr58630 6 121636258 to 121636265 7 + TSS region transcription start site region 58630
Cpgi17943 6 121636262 to 121636419 157 CpG island CpG island 17943
Tssr58631 6 121636268 to 121636279 11 + TSS region transcription start site region 58631
Tssr58632 6 121638288 to 121638299 11 + TSS region transcription start site region 58632
Tssr58633 6 121641334 to 121641352 18 + TSS region transcription start site region 58633
Tssr58634 6 121644896 to 121644927 31 + TSS region transcription start site region 58634
Gm44018 6 121708643 to 121709049 406 - pseudogene predicted gene, 44018
Tssr58635 6 121732971 to 121732972 1 + TSS region transcription start site region 58635
Gm7298 6 121734495 to 121784639 50144 + protein coding gene predicted gene 7298
Gm46973 6 121759018 to 121759151 133 - pseudogene predicted gene, 46973
Tssr58636 6 121838450 to 121838470 20 + TSS region transcription start site region 58636
Tssr58637 6 121838489 to 121838510 21 + TSS region transcription start site region 58637
Tssr58638 6 121838514 to 121838528 14 + TSS region transcription start site region 58638
Mug1 6 121838541 to 121889057 50516 + protein coding gene murinoglobulin 1
Tssr58639 6 121838625 to 121838639 14 + TSS region transcription start site region 58639
Tssr58640 6 121838672 to 121838681 9 + TSS region transcription start site region 58640
Tssr58641 6 121846717 to 121846742 25 + TSS region transcription start site region 58641
Tssr58642 6 121846815 to 121846846 31 + TSS region transcription start site region 58642
Tssr58643 6 121847818 to 121847822 4 + TSS region transcription start site region 58643
Tssr58644 6 121847963 to 121847978 15 + TSS region transcription start site region 58644
Tssr58645 6 121861119 to 121861137 18 + TSS region transcription start site region 58645
Tssr58646 6 121865726 to 121865745 19 + TSS region transcription start site region 58646
Tssr58647 6 121865819 to 121865848 29 + TSS region transcription start site region 58647
Tssr58648 6 121870580 to 121870595 15 + TSS region transcription start site region 58648
Tssr58649 6 121871310 to 121871321 11 + TSS region transcription start site region 58649
Gm44173 6 121914990 to 121915100 110 - pseudogene predicted gene, 44173
Mug4-ps 6 121916430 to 121956147 39717 + pseudogene murinoglobulin 4, pseudogene
Mug2 6 122006761 to 122085965 79204 + protein coding gene murinoglobulin 2
Gm44184 6 122034504 to 122034635 131 - pseudogene predicted gene, 44184
Tssr58650 6 122078704 to 122078707 3 + TSS region transcription start site region 58650
Tssr58651 6 122136628 to 122136638 10 + TSS region transcription start site region 58651
Gm10319 6 122136628 to 122150958 14330 + pseudogene predicted pseudogene 10319
Mug-ps1 6 122176053 to 122248566 72513 + pseudogene murinoglobulin, pseudogene 1