Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:121141988-121542011

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95 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30842 6 121137464 to 121155124 17660 + lncRNA gene predicted gene, 30842
Tssr62806 6 121173714 to 121173748 34 - TSS region transcription start site region 62806
Tssr62807 6 121173775 to 121173783 8 - TSS region transcription start site region 62807
Cpgi17936 6 121183662 to 121184641 979 CpG island CpG island 17936
Pex26 6 121183667 to 121198837 15170 + protein coding gene peroxisomal biogenesis factor 26
Tssr58563 6 121183884 to 121183941 57 + TSS region transcription start site region 58563
Tssr58564 6 121185456 to 121185471 15 + TSS region transcription start site region 58564
Gm44014 6 121196675 to 121198183 1508 - unclassified gene predicted gene, 44014
Gm38651 6 121200553 to 121204778 4225 + lncRNA gene predicted gene, 38651
Cpgi17937 6 121210496 to 121211449 953 CpG island CpG island 17937
Tssr58565 6 121210678 to 121210687 9 + TSS region transcription start site region 58565
Tssr58566 6 121210712 to 121210719 7 + TSS region transcription start site region 58566
Tssr58567 6 121210731 to 121210758 27 + TSS region transcription start site region 58567
Tuba8 6 121210734 to 121226098 15364 + protein coding gene tubulin, alpha 8
Tssr58568 6 121210771 to 121210786 15 + TSS region transcription start site region 58568
Tssr58569 6 121210791 to 121210813 22 + TSS region transcription start site region 58569
Gm15856 6 121223692 to 121226153 2461 - antisense lncRNA gene predicted gene 15856
Tssr62808 6 121226168 to 121226184 16 - TSS region transcription start site region 62808
Tssr58570 6 121226327 to 121226334 7 + TSS region transcription start site region 58570
Cpgi17938 6 121245600 to 121246061 461 CpG island CpG island 17938
Tssr62809 6 121245742 to 121245755 13 - TSS region transcription start site region 62809
Tssr62810 6 121245757 to 121245802 45 - TSS region transcription start site region 62810
Tssr58571 6 121245903 to 121245908 5 + TSS region transcription start site region 58571
Usp18 6 121245906 to 121270917 25011 + protein coding gene ubiquitin specific peptidase 18
Tssr58572 6 121245929 to 121245946 17 + TSS region transcription start site region 58572
Tssr58573 6 121246656 to 121246670 14 + TSS region transcription start site region 58573
Tssr58574 6 121249369 to 121249385 16 + TSS region transcription start site region 58574
Tssr58575 6 121252566 to 121252578 12 + TSS region transcription start site region 58575
Tssr58576 6 121252932 to 121252955 23 + TSS region transcription start site region 58576
Gm44148 6 121255203 to 121272685 17482 - lincRNA gene predicted gene, 44148
Tssr58577 6 121256877 to 121256899 22 + TSS region transcription start site region 58577
Tssr58578 6 121256933 to 121256947 14 + TSS region transcription start site region 58578
Tssr58579 6 121256983 to 121256994 11 + TSS region transcription start site region 58579
Tssr58580 6 121257195 to 121257214 19 + TSS region transcription start site region 58580
Tssr58581 6 121257247 to 121257261 14 + TSS region transcription start site region 58581
Tssr58582 6 121260962 to 121260989 27 + TSS region transcription start site region 58582
Tssr58583 6 121261445 to 121261458 13 + TSS region transcription start site region 58583
Tssr58584 6 121263918 to 121263930 12 + TSS region transcription start site region 58584
Tssr58585 6 121264028 to 121264042 14 + TSS region transcription start site region 58585
Tssr58586 6 121264087 to 121264110 23 + TSS region transcription start site region 58586
Tssr58587 6 121264119 to 121264137 18 + TSS region transcription start site region 58587
Tssr58588 6 121270470 to 121270487 17 + TSS region transcription start site region 58588
Tssr58589 6 121270538 to 121270550 12 + TSS region transcription start site region 58589
Tssr62811 6 121272700 to 121272727 27 - TSS region transcription start site region 62811
Tssr58590 6 121300280 to 121300297 17 + TSS region transcription start site region 58590
Slc6a13 6 121300296 to 121337721 37425 + protein coding gene solute carrier family 6 (neurotransmitter transporter, GABA), member 13
Tssr58591 6 121300732 to 121300755 23 + TSS region transcription start site region 58591
Tssr58592 6 121318238 to 121318256 18 + TSS region transcription start site region 58592
Gm24855 6 121325580 to 121325676 96 - miRNA gene predicted gene, 24855
Tssr58593 6 121336383 to 121336408 25 + TSS region transcription start site region 58593
Tssr58594 6 121336800 to 121336850 50 + TSS region transcription start site region 58594
Tssr58595 6 121336861 to 121336872 11 + TSS region transcription start site region 58595
Tssr58596 6 121341988 to 121342011 23 + TSS region transcription start site region 58596
Tssr58597 6 121342456 to 121342467 11 + TSS region transcription start site region 58597
Tssr58598 6 121342504 to 121342515 11 + TSS region transcription start site region 58598
Tssr58599 6 121342517 to 121342526 9 + TSS region transcription start site region 58599
Tssr58600 6 121342560 to 121342585 25 + TSS region transcription start site region 58600
Tssr58601 6 121342869 to 121342880 11 + TSS region transcription start site region 58601
Tssr58602 6 121342882 to 121342924 42 + TSS region transcription start site region 58602
Tssr58603 6 121343052 to 121343073 21 + TSS region transcription start site region 58603
Slc6a12 6 121343076 to 121365775 22699 + protein coding gene solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
Tssr62812 6 121343276 to 121343303 27 - TSS region transcription start site region 62812
Tssr58604 6 121343312 to 121343320 8 + TSS region transcription start site region 58604
Tssr58605 6 121343329 to 121343341 12 + TSS region transcription start site region 58605
Tssr58606 6 121343385 to 121343414 29 + TSS region transcription start site region 58606
Tssr58607 6 121343814 to 121343827 13 + TSS region transcription start site region 58607
Tssr58608 6 121343931 to 121343951 20 + TSS region transcription start site region 58608
Tssr58609 6 121343961 to 121343974 13 + TSS region transcription start site region 58609
Tssr58610 6 121346648 to 121346671 23 + TSS region transcription start site region 58610
Tssr58611 6 121346678 to 121346708 30 + TSS region transcription start site region 58611
Tssr58612 6 121346712 to 121346731 19 + TSS region transcription start site region 58612
Tssr58613 6 121356401 to 121356416 15 + TSS region transcription start site region 58613
Tssr58614 6 121356789 to 121356816 27 + TSS region transcription start site region 58614
Tssr58615 6 121356818 to 121356847 29 + TSS region transcription start site region 58615
Tssr58616 6 121356872 to 121356877 5 + TSS region transcription start site region 58616
Tssr58617 6 121356879 to 121356892 13 + TSS region transcription start site region 58617
Tssr58618 6 121356898 to 121356903 5 + TSS region transcription start site region 58618
Tssr58619 6 121356923 to 121356926 3 + TSS region transcription start site region 58619
Tssr58620 6 121357515 to 121357549 34 + TSS region transcription start site region 58620
Tssr58621 6 121359248 to 121359292 44 + TSS region transcription start site region 58621
Tssr58622 6 121359494 to 121359511 17 + TSS region transcription start site region 58622
Tssr58623 6 121359681 to 121359692 11 + TSS region transcription start site region 58623
Tssr58624 6 121363226 to 121363238 12 + TSS region transcription start site region 58624
Tssr58625 6 121363682 to 121363722 40 + TSS region transcription start site region 58625
Tssr58626 6 121365198 to 121365227 29 + TSS region transcription start site region 58626
Tssr58627 6 121365846 to 121365863 17 + TSS region transcription start site region 58627
Tssr58628 6 121365926 to 121365937 11 + TSS region transcription start site region 58628
Iqsec3 6 121372933 to 121473678 100745 - protein coding gene IQ motif and Sec7 domain 3
Cpgi17939 6 121412368 to 121413754 1386 CpG island CpG island 17939
Cpgi17940 6 121428326 to 121428540 214 CpG island CpG island 17940
Cpgi17941 6 121462843 to 121463249 406 CpG island CpG island 17941
Cpgi17942 6 121472856 to 121473908 1052 CpG island CpG island 17942
Tssr62813 6 121473588 to 121473628 40 - TSS region transcription start site region 62813
Tssr62814 6 121473630 to 121473680 50 - TSS region transcription start site region 62814
Gm43922 6 121538196 to 121538523 327 + pseudogene predicted gene, 43922