Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:120796782-121036807

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ibdq2 6 106005405 to 120917141 14911736 QTL inflammatory bowel disease QTL 2
Atp6v1e1 6 120795244 to 120822685 27441 - protein coding gene ATPase, H+ transporting, lysosomal V1 subunit E1
Gm25193 6 120797574 to 120797670 96 - miRNA gene predicted gene, 25193
Tssr58554 6 120817767 to 120817769 2 + TSS region transcription start site region 58554
Gm19245 6 120817768 to 120818097 329 + pseudogene predicted gene, 19245
Cpgi17927 6 120822264 to 120822855 591 CpG island CpG island 17927
Tssr62782 6 120822664 to 120822675 11 - TSS region transcription start site region 62782
Tssr62783 6 120822680 to 120822707 27 - TSS region transcription start site region 62783
Tssr62784 6 120822713 to 120822756 43 - TSS region transcription start site region 62784
Gm38889 6 120823013 to 120836166 13153 - lncRNA gene predicted gene, 38889
2610024L02Rik 6 120835396 to 120836073 677 unclassified gene RIKEN cDNA 2610024L02 gene
Cpgi17928 6 120835831 to 120836844 1013 CpG island CpG island 17928
Tssr58555 6 120836201 to 120836257 56 + TSS region transcription start site region 58555
Bcl2l13 6 120836217 to 120892842 56625 + protein coding gene BCL2-like 13 (apoptosis facilitator)
Tssr58556 6 120836268 to 120836283 15 + TSS region transcription start site region 58556
Tssr58557 6 120870037 to 120870041 4 + TSS region transcription start site region 58557
Bid 6 120893119 to 120917141 24022 - protein coding gene BH3 interacting domain death agonist
Gm17812 6 120908673 to 120908990 317 + pseudogene predicted gene, 17812
Gm44260 6 120912900 to 120914993 2093 - unclassified gene predicted gene, 44260
Cpgi17929 6 120915911 to 120916974 1063 CpG island CpG island 17929
Tssr62785 6 120916764 to 120916780 16 - TSS region transcription start site region 62785
Tssr62786 6 120916782 to 120916807 25 - TSS region transcription start site region 62786
Tssr62787 6 120916813 to 120916867 54 - TSS region transcription start site region 62787
Tssr58558 6 120927165 to 120927183 18 + TSS region transcription start site region 58558
Mical3 6 120931707 to 121130999 199292 - protein coding gene microtubule associated monooxygenase, calponin and LIM domain containing 3
Tssr58559 6 120932854 to 120932865 11 + TSS region transcription start site region 58559
Tssr58560 6 120932873 to 120932890 17 + TSS region transcription start site region 58560
Tssr62788 6 120933805 to 120933809 4 - TSS region transcription start site region 62788
Gm43916 6 120951901 to 120952867 966 + antisense lncRNA gene predicted gene, 43916
Cpgi17930 6 120958295 to 120959045 750 CpG island CpG island 17930
Gm43915 6 120958844 to 120997498 38654 + antisense lncRNA gene predicted gene, 43915
Tssr62789 6 120971398 to 120971437 39 - TSS region transcription start site region 62789
Tssr62790 6 120971609 to 120971638 29 - TSS region transcription start site region 62790
Tssr62791 6 121003005 to 121003012 7 - TSS region transcription start site region 62791
Tssr62792 6 121003034 to 121003052 18 - TSS region transcription start site region 62792
Tssr62793 6 121003066 to 121003076 10 - TSS region transcription start site region 62793
Tssr62794 6 121003099 to 121003134 35 - TSS region transcription start site region 62794
Gm9878 6 121026507 to 121030990 4483 + unclassified gene predicted gene 9878
Tssr62795 6 121027435 to 121027442 7 - TSS region transcription start site region 62795
Tssr62796 6 121027446 to 121027459 13 - TSS region transcription start site region 62796
Tssr58561 6 121027500 to 121027536 36 + TSS region transcription start site region 58561
Tssr62797 6 121031640 to 121031643 3 - TSS region transcription start site region 62797