Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:120481300-120851354

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il17ra 6 120463181 to 120483731 20550 + protein coding gene interleukin 17 receptor A
Tmem121b 6 120488939 to 120493807 4868 - protein coding gene transmembrane protein 121B
Tssr58540 6 120489078 to 120489113 35 + TSS region transcription start site region 58540
Cpgi17923 6 120492169 to 120494333 2164 CpG island CpG island 17923
Tssr62778 6 120493902 to 120493913 11 - TSS region transcription start site region 62778
Tssr62779 6 120493924 to 120493935 11 - TSS region transcription start site region 62779
Tssr62780 6 120493936 to 120494017 81 - TSS region transcription start site region 62780
Gm38888 6 120500342 to 120503539 3197 + lncRNA gene predicted gene, 38888
Hdhd5 6 120509494 to 120531319 21825 - protein coding gene haloacid dehalogenase like hydrolase domain containing 5
Gm20692 6 120512449 to 120513232 783 + antisense lncRNA gene predicted gene 20692
Gm24391 6 120524897 to 120524998 101 + snRNA gene predicted gene, 24391
Cpgi17924 6 120530851 to 120531734 883 CpG island CpG island 17924
Tssr62781 6 120531289 to 120531328 39 - TSS region transcription start site region 62781
Tssr58541 6 120554784 to 120554793 9 + TSS region transcription start site region 58541
1700072O05Rik 6 120554796 to 120562879 8083 + lincRNA gene RIKEN cDNA 1700072O05 gene
Gm44074 6 120577371 to 120577707 336 - pseudogene predicted gene, 44074
Cpgi17925 6 120579565 to 120579744 179 CpG island CpG island 17925
Gm44124 6 120579705 to 120580176 471 - unclassified gene predicted gene, 44124
Tssr58542 6 120605717 to 120605727 10 + TSS region transcription start site region 58542
Tssr58543 6 120644403 to 120644419 16 + TSS region transcription start site region 58543
Cpgi17926 6 120665359 to 120667510 2151 CpG island CpG island 17926
Tssr58544 6 120666300 to 120666354 54 + TSS region transcription start site region 58544
Cecr2 6 120666369 to 120771190 104821 + protein coding gene CECR2, histone acetyl-lysine reader
Tssr58545 6 120666388 to 120666424 36 + TSS region transcription start site region 58545
D6Mit369 6 120668275 to 120668396 121 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 369
Tssr58546 6 120742754 to 120742755 1 + TSS region transcription start site region 58546
Slc25a18 6 120773511 to 120794169 20658 + protein coding gene solute carrier family 25 (mitochondrial carrier), member 18
Tssr58547 6 120773549 to 120773579 30 + TSS region transcription start site region 58547
Tssr58548 6 120773584 to 120773586 2 + TSS region transcription start site region 58548
Tssr58549 6 120773592 to 120773597 5 + TSS region transcription start site region 58549
Tssr58550 6 120773611 to 120773624 13 + TSS region transcription start site region 58550
Tssr58551 6 120773633 to 120773636 3 + TSS region transcription start site region 58551
Tssr58552 6 120776511 to 120776533 22 + TSS region transcription start site region 58552
Tssr58553 6 120794063 to 120794069 6 + TSS region transcription start site region 58553
Atp6v1e1 6 120795244 to 120822685 27441 - protein coding gene ATPase, H+ transporting, lysosomal V1 subunit E1
Gm25193 6 120797574 to 120797670 96 - miRNA gene predicted gene, 25193
Tssr58554 6 120817767 to 120817769 2 + TSS region transcription start site region 58554
Gm19245 6 120817768 to 120818097 329 + pseudogene predicted gene, 19245
Cpgi17927 6 120822264 to 120822855 591 CpG island CpG island 17927
Tssr62782 6 120822664 to 120822675 11 - TSS region transcription start site region 62782
Tssr62783 6 120822680 to 120822707 27 - TSS region transcription start site region 62783
Tssr62784 6 120822713 to 120822756 43 - TSS region transcription start site region 62784
Gm38889 6 120823013 to 120836166 13153 - lncRNA gene predicted gene, 38889
2610024L02Rik 6 120835396 to 120836073 677 unclassified gene RIKEN cDNA 2610024L02 gene
Cpgi17928 6 120835831 to 120836844 1013 CpG island CpG island 17928
Tssr58555 6 120836201 to 120836257 56 + TSS region transcription start site region 58555
Bcl2l13 6 120836217 to 120892842 56625 + protein coding gene BCL2-like 13 (apoptosis facilitator)
Tssr58556 6 120836268 to 120836283 15 + TSS region transcription start site region 58556