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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:120479705-120680176

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Il17ra	6	120463181 to 120483731	20550	+	protein coding gene	interleukin 17 receptor A
Tmem121b	6	120488939 to 120493807	4868	-	protein coding gene	transmembrane protein 121B
Tssr58540	6	120489078 to 120489113	35	+	TSS region	transcription start site region 58540
Cpgi17923	6	120492169 to 120494333	2164		CpG island	CpG island 17923
Tssr62778	6	120493902 to 120493913	11	-	TSS region	transcription start site region 62778
Tssr62779	6	120493924 to 120493935	11	-	TSS region	transcription start site region 62779
Tssr62780	6	120493936 to 120494017	81	-	TSS region	transcription start site region 62780
Gm38888	6	120500342 to 120503539	3197	+	lncRNA gene	predicted gene, 38888
Hdhd5	6	120509494 to 120531319	21825	-	protein coding gene	haloacid dehalogenase like hydrolase domain containing 5
Gm20692	6	120512449 to 120513232	783	+	antisense lncRNA gene	predicted gene 20692
Gm24391	6	120524897 to 120524998	101	+	snRNA gene	predicted gene, 24391
Cpgi17924	6	120530851 to 120531734	883		CpG island	CpG island 17924
Tssr62781	6	120531289 to 120531328	39	-	TSS region	transcription start site region 62781
Tssr58541	6	120554784 to 120554793	9	+	TSS region	transcription start site region 58541
1700072O05Rik	6	120554796 to 120562879	8083	+	lincRNA gene	RIKEN cDNA 1700072O05 gene
Gm44074	6	120577371 to 120577707	336	-	pseudogene	predicted gene, 44074
Cpgi17925	6	120579565 to 120579744	179		CpG island	CpG island 17925
Gm44124	6	120579705 to 120580176	471	-	unclassified gene	predicted gene, 44124
Tssr58542	6	120605717 to 120605727	10	+	TSS region	transcription start site region 58542
Tssr58543	6	120644403 to 120644419	16	+	TSS region	transcription start site region 58543
Cpgi17926	6	120665359 to 120667510	2151		CpG island	CpG island 17926
Tssr58544	6	120666300 to 120666354	54	+	TSS region	transcription start site region 58544
Cecr2	6	120666369 to 120771190	104821	+	protein coding gene	CECR2, histone acetyl-lysine reader
Tssr58545	6	120666388 to 120666424	36	+	TSS region	transcription start site region 58545
D6Mit369	6	120668275 to 120668396	121		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 369