Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:120003438-120373463

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wnk1 6 119923969 to 120038672 114703 - protein coding gene WNK lysine deficient protein kinase 1
Gm16199 6 120005998 to 120006285 287 + pseudogene predicted gene 16199
Aips5 6 120007151 to 120007151 0 QTL autoimmune pancreatitis severity 5
4833412E19Rik 6 120009357 to 120011168 1811 unclassified gene RIKEN cDNA 4833412E19 gene
Tssr62749 6 120022790 to 120022793 3 - TSS region transcription start site region 62749
Mir706 6 120034228 to 120034311 83 - miRNA gene microRNA 706
Cpgi17916 6 120036880 to 120038981 2101 CpG island CpG island 17916
Tssr62750 6 120037334 to 120037353 19 - TSS region transcription start site region 62750
Tssr62751 6 120037860 to 120037880 20 - TSS region transcription start site region 62751
Tssr62752 6 120037887 to 120037914 27 - TSS region transcription start site region 62752
Tssr62753 6 120037965 to 120037976 11 - TSS region transcription start site region 62753
Tssr62754 6 120038023 to 120038050 27 - TSS region transcription start site region 62754
Tssr62755 6 120038060 to 120038139 79 - TSS region transcription start site region 62755
Tssr62756 6 120038305 to 120038363 58 - TSS region transcription start site region 62756
Tssr62757 6 120038546 to 120038555 9 - TSS region transcription start site region 62757
Tssr62758 6 120038621 to 120038636 15 - TSS region transcription start site region 62758
Tssr62759 6 120038647 to 120038699 52 - TSS region transcription start site region 62759
Cpgi17917 6 120039762 to 120040033 271 CpG island CpG island 17917
Tssr58518 6 120039901 to 120039926 25 + TSS region transcription start site region 58518
Tssr62760 6 120083559 to 120083582 23 - TSS region transcription start site region 62760
Tssr58519 6 120093348 to 120093359 11 + TSS region transcription start site region 58519
Ninj2 6 120093350 to 120200339 106989 + protein coding gene ninjurin 2
Tssr58520 6 120093370 to 120093381 11 + TSS region transcription start site region 58520
D6Dcr24 6 120104650 to 120104752 102 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 24
Tssr58521 6 120112695 to 120112748 53 + TSS region transcription start site region 58521
Tssr62761 6 120114755 to 120114802 47 - TSS region transcription start site region 62761
Gm25327 6 120143644 to 120143750 106 - snRNA gene predicted gene, 25327
Tssr62762 6 120187650 to 120187670 20 - TSS region transcription start site region 62762
Tssr62763 6 120187680 to 120187691 11 - TSS region transcription start site region 62763
Tssr62764 6 120188438 to 120188463 25 - TSS region transcription start site region 62764
Tssr62765 6 120188467 to 120188483 16 - TSS region transcription start site region 62765
Tssr58522 6 120189099 to 120189124 25 + TSS region transcription start site region 58522
B4galnt3 6 120203073 to 120294559 91486 - protein coding gene beta-1,4-N-acetyl-galactosaminyl transferase 3
Tssr62766 6 120227163 to 120227200 37 - TSS region transcription start site region 62766
Tssr62767 6 120242696 to 120242730 34 - TSS region transcription start site region 62767
Tssr62768 6 120257446 to 120257493 47 - TSS region transcription start site region 62768
Tssr62769 6 120286679 to 120286684 5 - TSS region transcription start site region 62769
Cpgi17918 6 120293812 to 120295181 1369 CpG island CpG island 17918
Tssr62770 6 120294281 to 120294316 35 - TSS region transcription start site region 62770
D330020A13Rik 6 120294364 to 120295432 1068 + protein coding gene RIKEN cDNA D330020A13 gene
Tssr1987 6 120294694 to 120294717 23 - TSS region transcription start site region 1987
Tssr62771 6 120294888 to 120294904 16 - TSS region transcription start site region 62771
Tssr62772 6 120294921 to 120294935 14 - TSS region transcription start site region 62772
Tssr1988 6 120302723 to 120302727 4 - TSS region transcription start site region 1988
Ccdc77 6 120324322 to 120364369 40047 - protein coding gene coiled-coil domain containing 77
D6Mit375 6 120339759 to 120339971 212 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology-375
Cpgi17919 6 120357326 to 120357495 169 CpG island CpG island 17919
Tssr62773 6 120357342 to 120357400 58 - TSS region transcription start site region 62773
Tssr62774 6 120357422 to 120357435 13 - TSS region transcription start site region 62774
Tssr62775 6 120357440 to 120357489 49 - TSS region transcription start site region 62775
Cpgi17920 6 120363673 to 120365209 1536 CpG island CpG island 17920
Tssr58523 6 120364094 to 120364163 69 + TSS region transcription start site region 58523
Kdm5a 6 120364124 to 120444574 80450 + protein coding gene lysine (K)-specific demethylase 5A
Tssr62776 6 120364317 to 120364328 11 - TSS region transcription start site region 62776
Tssr62777 6 120364344 to 120364374 30 - TSS region transcription start site region 62777
Tssr58524 6 120364393 to 120364448 55 + TSS region transcription start site region 58524
Tssr58525 6 120364462 to 120364469 7 + TSS region transcription start site region 58525