MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:119520796-119898167

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cia43	6	114182280 to 119760571	5578291		QTL	collagen induced arthritis QTL 43
Wnt5b	6	119432531 to 119544347	111816	-	protein coding gene	wingless-type MMTV integration site family, member 5B
Gm30690	6	119518005 to 119531087	13082	+	lncRNA gene	predicted gene, 30690
Cpgi17912	6	119543188 to 119544842	1654		CpG island	CpG island 17912
Tssr62725	6	119544282 to 119544304	22	-	TSS region	transcription start site region 62725
Erc1	6	119570796 to 119848167	277371	-	protein coding gene	ELKS/RAB6-interacting/CAST family member 1
Gm44317	6	119570941 to 119578057	7116	+	antisense lncRNA gene	predicted gene, 44317
Tssr62726	6	119673803 to 119673807	4	-	TSS region	transcription start site region 62726
Tssr58512	6	119690192 to 119690200	8	+	TSS region	transcription start site region 58512
Tssr62727	6	119714061 to 119714081	20	-	TSS region	transcription start site region 62727
Tssr62728	6	119818314 to 119818344	30	-	TSS region	transcription start site region 62728
Cpgi17913	6	119847363 to 119848866	1503		CpG island	CpG island 17913
Tssr62729	6	119848069 to 119848078	9	-	TSS region	transcription start site region 62729
Tssr62730	6	119848093 to 119848113	20	-	TSS region	transcription start site region 62730
Tssr62731	6	119848120 to 119848168	48	-	TSS region	transcription start site region 62731
3110021A11Rik	6	119848193 to 119849029	836	+	lncRNA gene	RIKEN cDNA 3110021A11 gene
Gm15532	6	119892920 to 119893800	880	+	pseudogene	predicted gene 15532
4930540M05Rik	6	119896159 to 119902653	6494	-	lincRNA gene	RIKEN cDNA 4930540M05 gene